RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 WAPLQ7Z5K2 1190 aa29.51■■■□□ 2.31
APOE-203ENST00000434152 LRPPRCP42704 1394 aaKnown RBP29.5■■■□□ 2.31
APOE-203ENST00000434152 LAMC1P11047 1609 aa29.49■■■□□ 2.31
APOE-203ENST00000434152 ABCC11Q96J66 1382 aa29.48■■■□□ 2.31
APOE-203ENST00000434152 SHPRHQ149N8 1683 aa29.47■■■□□ 2.31
APOE-203ENST00000434152 C14orf93Q9H972 538 aaKnown RBP29.47■■■□□ 2.31
APOE-203ENST00000434152 NHSL1Q5SYE7 1610 aa29.46■■■□□ 2.31
APOE-203ENST00000434152 TECPR2O15040 1411 aa29.45■■■□□ 2.3
APOE-203ENST00000434152 CFAP70Q5T0N1 1121 aa29.44■■■□□ 2.3
APOE-203ENST00000434152 ZNF772Q68DY9 489 aaPredicted RBP29.44■■■□□ 2.3
APOE-203ENST00000434152 PCGF6Q9BYE7 350 aa29.44■■■□□ 2.3
APOE-203ENST00000434152 PLEKHH1Q9ULM0 1364 aa29.42■■■□□ 2.3
APOE-203ENST00000434152 DCAF11Q8TEB1 546 aa29.42■■■□□ 2.3
APOE-203ENST00000434152 SOS2Q07890 1332 aaPredicted RBP29.42■■■□□ 2.3
APOE-203ENST00000434152 PNPLA6Q8IY17 1366 aa29.41■■■□□ 2.3
APOE-203ENST00000434152 ESCO1Q5FWF5 840 aa29.41■■■□□ 2.3
APOE-203ENST00000434152 YTHDC2Q9H6S0 1430 aaKnown RBP29.4■■■□□ 2.3
APOE-203ENST00000434152 SIRT1Q96EB6 747 aa29.4■■■□□ 2.3
APOE-203ENST00000434152 NUTM2FA1L443 756 aa29.38■■■□□ 2.29
APOE-203ENST00000434152 KNDC1Q76NI1 1749 aa29.36■■■□□ 2.29
APOE-203ENST00000434152 CDC42BPGQ6DT37 1551 aa29.35■■■□□ 2.29
APOE-203ENST00000434152 SIN3AQ96ST3 1273 aa29.34■■■□□ 2.29
APOE-203ENST00000434152 FOXO3O43524 673 aa29.33■■■□□ 2.29
APOE-203ENST00000434152 KDM2AQ9Y2K7 1162 aa29.33■■■□□ 2.29
APOE-203ENST00000434152 AFF2P51816 1311 aa29.33■■■□□ 2.29
APOE-203ENST00000434152 C8orf37Q96NL8 207 aa29.32■■■□□ 2.28
APOE-203ENST00000434152 KIAA1210Q9ULL0 1709 aa29.31■■■□□ 2.28
APOE-203ENST00000434152 NPHP3Q7Z494 1330 aa29.31■■■□□ 2.28
APOE-203ENST00000434152 ADAMTS2O95450 1211 aa29.3■■■□□ 2.28
APOE-203ENST00000434152 RXRBP28702 533 aa29.29■■■□□ 2.28
APOE-203ENST00000434152 ADGRB1O14514 1584 aa29.28■■■□□ 2.28
APOE-203ENST00000434152 XPCQ01831 940 aaPredicted RBP29.28■■■□□ 2.28
APOE-203ENST00000434152 PRAM1Q96QH2 718 aa29.28■■■□□ 2.28
APOE-203ENST00000434152 L3MBTL2Q969R5 705 aa29.27■■■□□ 2.28
APOE-203ENST00000434152 CLSPNQ9HAW4 1339 aa29.26■■■□□ 2.27
APOE-203ENST00000434152 NEUROD1Q13562 356 aa29.26■■■□□ 2.27
APOE-203ENST00000434152 SAFB2Q14151 953 aaKnown RBP eCLIP29.26■■■□□ 2.27
APOE-203ENST00000434152 NGLY1Q96IV0 654 aa29.26■■■□□ 2.27
APOE-203ENST00000434152 QTRT2Q9H974 415 aaKnown RBP29.24■■■□□ 2.27
APOE-203ENST00000434152 POGKQ9P215 609 aa29.23■■■□□ 2.27
APOE-203ENST00000434152 DLC1Q96QB1 1528 aa29.22■■■□□ 2.27
APOE-203ENST00000434152 PXDNQ92626 1479 aa29.22■■■□□ 2.27
APOE-203ENST00000434152 TRAK1Q9UPV9 953 aa29.21■■■□□ 2.27
APOE-203ENST00000434152 KRT28Q7Z3Y7 464 aa29.17■■■□□ 2.26
APOE-203ENST00000434152 PHF8Q9UPP1 1060 aa29.17■■■□□ 2.26
APOE-203ENST00000434152 RBM6P78332 1123 aaKnown RBP29.16■■■□□ 2.26
APOE-203ENST00000434152 FMN2Q9NZ56 1722 aa29.16■■■□□ 2.26
APOE-203ENST00000434152 TONSLQ96HA7 1378 aa29.15■■■□□ 2.26
APOE-203ENST00000434152 FNBP4Q8N3X1 1017 aaPredicted RBP29.14■■■□□ 2.26
APOE-203ENST00000434152 USP21Q9UK80 565 aa29.14■■■□□ 2.26
APOE-203ENST00000434152 SPATA31A3Q5VYP0 1347 aa29.13■■■□□ 2.25
APOE-203ENST00000434152 HIRIP3Q9BW71 556 aaPredicted RBP29.12■■■□□ 2.25
APOE-203ENST00000434152 TRPM1Q7Z4N2 1603 aa29.12■■■□□ 2.25
APOE-203ENST00000434152 COL22A1Q8NFW1 1626 aaPredicted RBP29.12■■■□□ 2.25
APOE-203ENST00000434152 CDK12Q9NYV4 1490 aaPredicted RBP29.11■■■□□ 2.25
APOE-203ENST00000434152 UPF1Q92900 1129 aaKnown RBP eCLIP29.1■■■□□ 2.25
APOE-203ENST00000434152 MINK1Q8N4C8 1332 aaPredicted RBP29.1■■■□□ 2.25
APOE-203ENST00000434152 PSME1Q06323 249 aa29.09■■■□□ 2.25
APOE-203ENST00000434152 TRPC5Q9UL62 973 aaPredicted RBP29.08■■■□□ 2.25
APOE-203ENST00000434152 TIMELESSQ9UNS1 1208 aa29.08■■■□□ 2.25
APOE-203ENST00000434152 ARHGEF28Q8N1W1 1705 aaKnown RBP29.08■■■□□ 2.25
APOE-203ENST00000434152 PMFBP1Q8TBY8 1022 aa29.07■■■□□ 2.24
APOE-203ENST00000434152 KIF1AQ12756 1690 aa29.05■■■□□ 2.24
APOE-203ENST00000434152 NBPF1Q3BBV0 1214 aa29.04■■■□□ 2.24
APOE-203ENST00000434152 ADGRB2O60241 1585 aa29.04■■■□□ 2.24
APOE-203ENST00000434152 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
APOE-203ENST00000434152 RGPD8O14715 1765 aaPredicted RBP29.03■■■□□ 2.24
APOE-203ENST00000434152 WASLO00401 505 aaPredicted RBP29.03■■■□□ 2.24
APOE-203ENST00000434152 RGS12O14924 1447 aa29.03■■■□□ 2.24
APOE-203ENST00000434152 PRR36Q9H6K5 1346 aa29.01■■■□□ 2.23
APOE-203ENST00000434152 SBNO1A3KN83 1393 aa29.01■■■□□ 2.23
APOE-203ENST00000434152 BCL9LQ86UU0 1499 aa29■■■□□ 2.23
APOE-203ENST00000434152 CABLES1Q8TDN4 633 aa29■■■□□ 2.23
APOE-203ENST00000434152 NBPF8Q3BBV2 869 aa28.99■■■□□ 2.23
APOE-203ENST00000434152 LMOD2Q6P5Q4 547 aa28.99■■■□□ 2.23
APOE-203ENST00000434152 CCER1Q8TC90 406 aaPredicted RBP28.99■■■□□ 2.23
APOE-203ENST00000434152 ATRNO75882 1429 aa28.99■■■□□ 2.23
APOE-203ENST00000434152 TNS3Q68CZ2 1445 aa28.99■■■□□ 2.23
APOE-203ENST00000434152 GPRASP1Q5JY77 1395 aa28.99■■■□□ 2.23
APOE-203ENST00000434152 PLEKHG5O94827 1062 aa28.98■■■□□ 2.23
APOE-203ENST00000434152 USP32Q8NFA0 1604 aa28.97■■■□□ 2.23
APOE-203ENST00000434152 ROCK2O75116 1388 aaKnown RBP28.96■■■□□ 2.23
APOE-203ENST00000434152 EIF3AQ14152 1382 aaKnown RBP28.96■■■□□ 2.23
APOE-203ENST00000434152 HAP1P54257 671 aaPredicted RBP28.95■■■□□ 2.22
APOE-203ENST00000434152 RALGAPBQ86X10 1494 aa28.95■■■□□ 2.22
APOE-203ENST00000434152 UNC5CLQ8IV45 518 aa28.93■■■□□ 2.22
APOE-203ENST00000434152 GJD4Q96KN9 370 aaPredicted RBP28.93■■■□□ 2.22
APOE-203ENST00000434152 ARHGEF10O15013 1369 aa28.92■■■□□ 2.22
APOE-203ENST00000434152 TULP4Q9NRJ4 1543 aa28.91■■■□□ 2.22
APOE-203ENST00000434152 NGDNQ8NEJ9 315 aaKnown RBP28.91■■■□□ 2.22
APOE-203ENST00000434152 NUDT16Q96DE0 195 aaKnown RBP28.91■■■□□ 2.22
APOE-203ENST00000434152 CDK19Q9BWU1 502 aa28.9■■■□□ 2.22
APOE-203ENST00000434152 SLIT2O94813 1529 aa28.89■■■□□ 2.22
APOE-203ENST00000434152 MARF1Q9Y4F3 1742 aaKnown RBP28.89■■■□□ 2.21
APOE-203ENST00000434152 CENPJQ9HC77 1338 aaPredicted RBP28.87■■■□□ 2.21
APOE-203ENST00000434152 FAM83GA6ND36 823 aa28.85■■■□□ 2.21
APOE-203ENST00000434152 QRICH2Q9H0J4 1663 aa28.85■■■□□ 2.21
APOE-203ENST00000434152 PAK3O75914 559 aaPredicted RBP28.83■■■□□ 2.21
APOE-203ENST00000434152 CARD11Q9BXL7 1154 aa28.82■■■□□ 2.2
APOE-203ENST00000434152 ATAD2Q6PL18 1390 aa28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 825.3 ms