RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 DLC1Q96QB1 1528 aa22.14■■□□□ 1.13
TREX1-201ENST00000433541 DCCP43146 1447 aa22.14■■□□□ 1.13
TREX1-201ENST00000433541 FAM135BQ49AJ0 1406 aa22.14■■□□□ 1.13
TREX1-201ENST00000433541 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
TREX1-201ENST00000433541 SLAIN2Q9P270 581 aa22.12■■□□□ 1.13
TREX1-201ENST00000433541 ROBO1Q9Y6N7 1651 aa22.11■■□□□ 1.13
TREX1-201ENST00000433541 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
TREX1-201ENST00000433541 SIRT1Q96EB6 747 aa22.09■■□□□ 1.13
TREX1-201ENST00000433541 CDC42BPGQ6DT37 1551 aa22.08■■□□□ 1.13
TREX1-201ENST00000433541 TIMELESSQ9UNS1 1208 aa22.08■■□□□ 1.13
TREX1-201ENST00000433541 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
TREX1-201ENST00000433541 CARD11Q9BXL7 1154 aa22.06■■□□□ 1.12
TREX1-201ENST00000433541 QRICH2Q9H0J4 1663 aa22.05■■□□□ 1.12
TREX1-201ENST00000433541 RALGAPBQ86X10 1494 aa22.05■■□□□ 1.12
TREX1-201ENST00000433541 NUTM2FA1L443 756 aa22.05■■□□□ 1.12
TREX1-201ENST00000433541 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
TREX1-201ENST00000433541 EIF3AQ14152 1382 aaKnown RBP22.04■■□□□ 1.12
TREX1-201ENST00000433541 FMN2Q9NZ56 1722 aa22.04■■□□□ 1.12
TREX1-201ENST00000433541 MST1RQ04912 1400 aa22.04■■□□□ 1.12
TREX1-201ENST00000433541 PHLPP1O60346 1717 aa22.02■■□□□ 1.12
TREX1-201ENST00000433541 CENPJQ9HC77 1338 aaPredicted RBP22.02■■□□□ 1.12
TREX1-201ENST00000433541 RGPD8O14715 1765 aaPredicted RBP22.01■■□□□ 1.11
TREX1-201ENST00000433541 ADGRB2O60241 1585 aa22■■□□□ 1.11
TREX1-201ENST00000433541 HSPA1LP34931 641 aa22■■□□□ 1.11
TREX1-201ENST00000433541 C1orf167Q5SNV9 1468 aa22■■□□□ 1.11
TREX1-201ENST00000433541 ESCO1Q5FWF5 840 aa21.98■■□□□ 1.11
TREX1-201ENST00000433541 BRINP3Q76B58 766 aa21.97■■□□□ 1.11
TREX1-201ENST00000433541 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
TREX1-201ENST00000433541 ORAI2Q96SN7 254 aa21.94■■□□□ 1.1
TREX1-201ENST00000433541 WASLO00401 505 aaPredicted RBP21.93■■□□□ 1.1
TREX1-201ENST00000433541 ITSN1Q15811 1721 aa21.92■■□□□ 1.1
TREX1-201ENST00000433541 KIF1AQ12756 1690 aa21.91■■□□□ 1.1
TREX1-201ENST00000433541 NHSL1Q5SYE7 1610 aa21.91■■□□□ 1.1
TREX1-201ENST00000433541 TULP4Q9NRJ4 1543 aa21.91■■□□□ 1.1
TREX1-201ENST00000433541 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
TREX1-201ENST00000433541 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
TREX1-201ENST00000433541 CDK19Q9BWU1 502 aa21.9■■□□□ 1.1
TREX1-201ENST00000433541 ANKARQ7Z5J8 1434 aa21.89■■□□□ 1.1
TREX1-201ENST00000433541 USP32Q8NFA0 1604 aa21.89■■□□□ 1.09
TREX1-201ENST00000433541 DDX17Q92841 729 aaKnown RBP21.89■■□□□ 1.09
TREX1-201ENST00000433541 COL16A1Q07092 1604 aaPredicted RBP21.88■■□□□ 1.09
TREX1-201ENST00000433541 EVC2Q86UK5 1308 aa21.87■■□□□ 1.09
TREX1-201ENST00000433541 USP47Q96K76 1375 aa21.87■■□□□ 1.09
TREX1-201ENST00000433541 PHF8Q9UPP1 1060 aa21.86■■□□□ 1.09
TREX1-201ENST00000433541 NPHP3Q7Z494 1330 aa21.85■■□□□ 1.09
TREX1-201ENST00000433541 FOXO3O43524 673 aa21.85■■□□□ 1.09
TREX1-201ENST00000433541 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
TREX1-201ENST00000433541 XPCQ01831 940 aaPredicted RBP21.84■■□□□ 1.09
TREX1-201ENST00000433541 NUDT16Q96DE0 195 aaKnown RBP21.84■■□□□ 1.09
TREX1-201ENST00000433541 CABP2Q9NPB3 220 aa21.84■■□□□ 1.09
TREX1-201ENST00000433541 ATP7BP35670 1465 aa21.83■■□□□ 1.08
TREX1-201ENST00000433541 PRR36Q9H6K5 1346 aa21.82■■□□□ 1.08
TREX1-201ENST00000433541 ST20-MTHFSA0A0A6YYL1 179 aa21.82■■□□□ 1.08
TREX1-201ENST00000433541 NGDNQ8NEJ9 315 aaKnown RBP21.81■■□□□ 1.08
TREX1-201ENST00000433541 TOPAZ1Q8N9V7 1692 aa21.81■■□□□ 1.08
TREX1-201ENST00000433541 PSME1Q06323 249 aa21.8■■□□□ 1.08
TREX1-201ENST00000433541 JCADQ9P266 1359 aa21.79■■□□□ 1.08
TREX1-201ENST00000433541 SBNO2Q9Y2G9 1366 aa21.79■■□□□ 1.08
TREX1-201ENST00000433541 LRRC59Q96AG4 307 aaKnown RBP21.79■■□□□ 1.08
TREX1-201ENST00000433541 CCDC61Q9Y6R9 512 aa21.78■■□□□ 1.08
TREX1-201ENST00000433541 SHPRHQ149N8 1683 aa21.78■■□□□ 1.08
TREX1-201ENST00000433541 KRT28Q7Z3Y7 464 aa21.77■■□□□ 1.08
TREX1-201ENST00000433541 PPIP5K1Q6PFW1 1433 aa21.77■■□□□ 1.08
TREX1-201ENST00000433541 LMOD2Q6P5Q4 547 aa21.76■■□□□ 1.07
TREX1-201ENST00000433541 PXDNQ92626 1479 aa21.76■■□□□ 1.07
TREX1-201ENST00000433541 SLC24A1O60721 1099 aa21.75■■□□□ 1.07
TREX1-201ENST00000433541 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
TREX1-201ENST00000433541 SOS2Q07890 1332 aaPredicted RBP21.75■■□□□ 1.07
TREX1-201ENST00000433541 ATAD2Q6PL18 1390 aa21.74■■□□□ 1.07
TREX1-201ENST00000433541 PAK3O75914 559 aaPredicted RBP21.73■■□□□ 1.07
TREX1-201ENST00000433541 TMF1P82094 1093 aa21.73■■□□□ 1.07
TREX1-201ENST00000433541 NUTM2BA6NNL0 878 aaPredicted RBP21.72■■□□□ 1.07
TREX1-201ENST00000433541 NUTM2EB1AL46 878 aaPredicted RBP21.72■■□□□ 1.07
TREX1-201ENST00000433541 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
TREX1-201ENST00000433541 NUTM2AQ8IVF1 878 aaPredicted RBP21.72■■□□□ 1.07
TREX1-201ENST00000433541 MED1Q15648 1581 aaPredicted RBP21.71■■□□□ 1.07
TREX1-201ENST00000433541 TMC1Q8TDI8 760 aa21.71■■□□□ 1.07
TREX1-201ENST00000433541 TESK2Q96S53 571 aa21.71■■□□□ 1.07
TREX1-201ENST00000433541 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
TREX1-201ENST00000433541 ACEP12821 1306 aa21.71■■□□□ 1.07
TREX1-201ENST00000433541 MEX3CQ5U5Q3 659 aaKnown RBP21.7■■□□□ 1.06
TREX1-201ENST00000433541 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
TREX1-201ENST00000433541 HSPA5P11021 654 aaKnown RBP21.69■■□□□ 1.06
TREX1-201ENST00000433541 SPATA31A6Q5VVP1 1343 aa21.69■■□□□ 1.06
TREX1-201ENST00000433541 HAP1P54257 671 aaPredicted RBP21.68■■□□□ 1.06
TREX1-201ENST00000433541 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
TREX1-201ENST00000433541 TNS3Q68CZ2 1445 aa21.68■■□□□ 1.06
TREX1-201ENST00000433541 TRPM3Q9HCF6 1732 aaPredicted RBP21.68■■□□□ 1.06
TREX1-201ENST00000433541 DISP3Q9P2K9 1392 aa21.67■■□□□ 1.06
TREX1-201ENST00000433541 PLEKHG3A1L390 1219 aa21.67■■□□□ 1.06
TREX1-201ENST00000433541 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
TREX1-201ENST00000433541 POLR3GLQ9BT43 218 aa21.67■■□□□ 1.06
TREX1-201ENST00000433541 SPATA31A3Q5VYP0 1347 aa21.66■■□□□ 1.06
TREX1-201ENST00000433541 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
TREX1-201ENST00000433541 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
TREX1-201ENST00000433541 POLR3AO14802 1390 aaPredicted RBP21.65■■□□□ 1.06
TREX1-201ENST00000433541 ARHGEF10O15013 1369 aa21.64■■□□□ 1.06
TREX1-201ENST00000433541 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.05
TREX1-201ENST00000433541 ALS2Q96Q42 1657 aa21.63■■□□□ 1.05
TREX1-201ENST00000433541 HDGFL2Q7Z4V5 671 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms