RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 PIK3C2GO75747 1445 aa11.48□□□□□ -0.57
SRGAP3-203ENST00000433332 CHGAP10645 457 aaKnown RBP11.48□□□□□ -0.57
SRGAP3-203ENST00000433332 SENP3Q9H4L4 574 aaPredicted RBP11.48□□□□□ -0.57
SRGAP3-203ENST00000433332 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
SRGAP3-203ENST00000433332 ZNF428Q96B54 188 aa11.46□□□□□ -0.57
SRGAP3-203ENST00000433332 MYO3AQ8NEV4 1616 aa11.46□□□□□ -0.58
SRGAP3-203ENST00000433332 TESK2Q96S53 571 aa11.45□□□□□ -0.58
SRGAP3-203ENST00000433332 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
SRGAP3-203ENST00000433332 ZFYVE9O95405 1425 aa11.45□□□□□ -0.58
SRGAP3-203ENST00000433332 MYO5BQ9ULV0 1848 aa11.45□□□□□ -0.58
SRGAP3-203ENST00000433332 TICAM2Q86XR7 235 aa11.45□□□□□ -0.58
SRGAP3-203ENST00000433332 IDI1Q13907 227 aa11.44□□□□□ -0.58
SRGAP3-203ENST00000433332 DISP3Q9P2K9 1392 aa11.44□□□□□ -0.58
SRGAP3-203ENST00000433332 RBM25P49756 843 aaKnown RBP11.44□□□□□ -0.58
SRGAP3-203ENST00000433332 ADGRB1O14514 1584 aa11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 TMF1P82094 1093 aa11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 VGFO15240 615 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 MLECQ14165 292 aa11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.43□□□□□ -0.58
SRGAP3-203ENST00000433332 FBXO31Q5XUX0 539 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-203ENST00000433332 ZNF692Q9BU19 519 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-203ENST00000433332 PRKRIP1Q9H875 184 aaPredicted RBP11.42□□□□□ -0.58
SRGAP3-203ENST00000433332 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
SRGAP3-203ENST00000433332 C14orf93Q9H972 538 aaKnown RBP11.41□□□□□ -0.58
SRGAP3-203ENST00000433332 ZMYM3Q14202 1370 aa11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 KDM5AP29375 1690 aaKnown RBP11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 IFNLR1Q8IU57 520 aaPredicted RBP11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 ZNF592Q92610 1267 aa11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 SBNO2Q9Y2G9 1366 aa11.4□□□□□ -0.58
SRGAP3-203ENST00000433332 KTN1Q86UP2 1357 aaKnown RBP11.39□□□□□ -0.59
SRGAP3-203ENST00000433332 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
SRGAP3-203ENST00000433332 CLSTN1O94985 981 aa11.38□□□□□ -0.59
SRGAP3-203ENST00000433332 BRPF3Q9ULD4 1205 aa11.38□□□□□ -0.59
SRGAP3-203ENST00000433332 MYOM1P52179 1685 aa11.38□□□□□ -0.59
SRGAP3-203ENST00000433332 FER1L4A9Z1Z3 1794 aa11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 ARHGEF28Q8N1W1 1705 aaKnown RBP11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 TNRQ92752 1358 aa11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 FOXD4L5Q5VV16 416 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 FAM177A1Q8N128 213 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 FOXD4L4Q8WXT5 416 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
SRGAP3-203ENST00000433332 ASXL1Q8IXJ9 1541 aa11.36□□□□□ -0.59
SRGAP3-203ENST00000433332 VASPP50552 380 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-203ENST00000433332 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
SRGAP3-203ENST00000433332 CENPJQ9HC77 1338 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-203ENST00000433332 ZFP91Q96JP5 570 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-203ENST00000433332 IRX6P78412 446 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-203ENST00000433332 PSMD1Q99460 953 aa11.35□□□□□ -0.59
SRGAP3-203ENST00000433332 RIMS2Q9UQ26 1411 aa11.35□□□□□ -0.59
SRGAP3-203ENST00000433332 USP35Q9P2H5 1018 aa11.35□□□□□ -0.59
SRGAP3-203ENST00000433332 UBR1Q8IWV7 1749 aa11.34□□□□□ -0.59
SRGAP3-203ENST00000433332 C3P01024 1663 aa11.34□□□□□ -0.59
SRGAP3-203ENST00000433332 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
SRGAP3-203ENST00000433332 ALKQ9UM73 1620 aa11.34□□□□□ -0.59
SRGAP3-203ENST00000433332 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
SRGAP3-203ENST00000433332 RALBP1Q15311 655 aa11.33□□□□□ -0.6
SRGAP3-203ENST00000433332 CWC22Q9HCG8 908 aaKnown RBP11.33□□□□□ -0.6
SRGAP3-203ENST00000433332 ATXN8OSP0DMR3 200 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 SETD1AO15047 1707 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 APBB1O00213 710 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 TMEM132EQ6IEE7 984 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 TRAK1Q9UPV9 953 aa11.32□□□□□ -0.6
SRGAP3-203ENST00000433332 CERS3Q8IU89 383 aa11.31□□□□□ -0.6
SRGAP3-203ENST00000433332 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.31□□□□□ -0.6
SRGAP3-203ENST00000433332 PANK3Q9H999 370 aa11.31□□□□□ -0.6
SRGAP3-203ENST00000433332 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-203ENST00000433332 YTHDC2Q9H6S0 1430 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-203ENST00000433332 MYBBP1AQ9BQG0 1328 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-203ENST00000433332 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
SRGAP3-203ENST00000433332 IPO4Q8TEX9 1081 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-203ENST00000433332 PTPRMP28827 1452 aa11.3□□□□□ -0.6
SRGAP3-203ENST00000433332 CCDC184Q52MB2 194 aa11.29□□□□□ -0.6
SRGAP3-203ENST00000433332 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
SRGAP3-203ENST00000433332 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
SRGAP3-203ENST00000433332 BRD4O60885 1362 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-203ENST00000433332 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
SRGAP3-203ENST00000433332 TMEM2Q9UHN6 1383 aa11.28□□□□□ -0.6
SRGAP3-203ENST00000433332 HDGFP51858 240 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-203ENST00000433332 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
SRGAP3-203ENST00000433332 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
SRGAP3-203ENST00000433332 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
SRGAP3-203ENST00000433332 KNDC1Q76NI1 1749 aa11.27□□□□□ -0.61
SRGAP3-203ENST00000433332 CHRM1P11229 460 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-203ENST00000433332 CNGB1Q14028 1251 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-203ENST00000433332 KNSTRNQ9Y448 316 aa11.26□□□□□ -0.61
SRGAP3-203ENST00000433332 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
SRGAP3-203ENST00000433332 LRPPRCP42704 1394 aaKnown RBP11.26□□□□□ -0.61
SRGAP3-203ENST00000433332 MFAP1P55081 439 aaKnown RBP11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 NLRP13Q86W25 1043 aa11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 SLIT1O75093 1534 aa11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 RIMS1Q86UR5 1692 aaKnown RBP11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 USP32Q8NFA0 1604 aa11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 E9PSI1 815 aa11.25□□□□□ -0.61
SRGAP3-203ENST00000433332 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms