RNA–Protein interactions for RNA: ENST00000433118.5

SMPD4-206, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 3,335 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-206ENST00000433118 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
SMPD4-206ENST00000433118 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
SMPD4-206ENST00000433118 KIF13AQ9H1H9 1805 aa13.75□□□□□ -0.21
SMPD4-206ENST00000433118 ASXL1Q8IXJ9 1541 aa13.74□□□□□ -0.21
SMPD4-206ENST00000433118 NEFMP07197 916 aa13.74□□□□□ -0.21
SMPD4-206ENST00000433118 CCDC146Q8IYE0 955 aa13.74□□□□□ -0.21
SMPD4-206ENST00000433118 POGKQ9P215 609 aa13.74□□□□□ -0.21
SMPD4-206ENST00000433118 PPLO60437 1756 aa13.74□□□□□ -0.21
SMPD4-206ENST00000433118 SRPK2P78362 688 aaKnown RBP13.74□□□□□ -0.21
SMPD4-206ENST00000433118 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
SMPD4-206ENST00000433118 MYO5BQ9ULV0 1848 aa13.73□□□□□ -0.21
SMPD4-206ENST00000433118 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-206ENST00000433118 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
SMPD4-206ENST00000433118 NEXMIFQ5QGS0 1516 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 KDM2BQ8NHM5 1336 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 ZNF521Q96K83 1311 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
SMPD4-206ENST00000433118 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.21
SMPD4-206ENST00000433118 KIAA1210Q9ULL0 1709 aa13.71□□□□□ -0.21
SMPD4-206ENST00000433118 ADGRB1O14514 1584 aa13.71□□□□□ -0.22
SMPD4-206ENST00000433118 ZMYM3Q14202 1370 aa13.71□□□□□ -0.22
SMPD4-206ENST00000433118 WAPLQ7Z5K2 1190 aa13.7□□□□□ -0.22
SMPD4-206ENST00000433118 MYOM1P52179 1685 aa13.7□□□□□ -0.22
SMPD4-206ENST00000433118 PPM1GO15355 546 aaPredicted RBP13.7□□□□□ -0.22
SMPD4-206ENST00000433118 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
SMPD4-206ENST00000433118 APAF1O14727 1248 aa13.7□□□□□ -0.22
SMPD4-206ENST00000433118 KDM5AP29375 1690 aaKnown RBP13.7□□□□□ -0.22
SMPD4-206ENST00000433118 USP35Q9P2H5 1018 aa13.69□□□□□ -0.22
SMPD4-206ENST00000433118 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
SMPD4-206ENST00000433118 DAXXQ9UER7 740 aaPredicted RBP13.69□□□□□ -0.22
SMPD4-206ENST00000433118 ZC3H13Q5T200 1668 aaKnown RBP13.68□□□□□ -0.22
SMPD4-206ENST00000433118 NSD3Q9BZ95 1437 aa13.68□□□□□ -0.22
SMPD4-206ENST00000433118 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
SMPD4-206ENST00000433118 SLC24A1O60721 1099 aa13.67□□□□□ -0.22
SMPD4-206ENST00000433118 RGS3P49796 1198 aa13.67□□□□□ -0.22
SMPD4-206ENST00000433118 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
SMPD4-206ENST00000433118 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
SMPD4-206ENST00000433118 TMEM131LA2VDJ0 1609 aa13.67□□□□□ -0.22
SMPD4-206ENST00000433118 FAM161AQ3B820 660 aa13.66□□□□□ -0.22
SMPD4-206ENST00000433118 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
SMPD4-206ENST00000433118 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
SMPD4-206ENST00000433118 SETBP1Q9Y6X0 1596 aa13.65□□□□□ -0.22
SMPD4-206ENST00000433118 BCAR3O75815 825 aa13.65□□□□□ -0.22
SMPD4-206ENST00000433118 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
SMPD4-206ENST00000433118 QRICH2Q9H0J4 1663 aa13.65□□□□□ -0.22
SMPD4-206ENST00000433118 TXNDC2Q86VQ3 553 aa13.65□□□□□ -0.22
SMPD4-206ENST00000433118 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
SMPD4-206ENST00000433118 AGLP35573 1532 aa13.64□□□□□ -0.23
SMPD4-206ENST00000433118 ARHGEF40Q8TER5 1519 aa13.64□□□□□ -0.23
SMPD4-206ENST00000433118 SBNO2Q9Y2G9 1366 aa13.64□□□□□ -0.23
SMPD4-206ENST00000433118 E9PSI1 815 aa13.64□□□□□ -0.23
SMPD4-206ENST00000433118 TRMT2AQ8IZ69 625 aaKnown RBP13.64□□□□□ -0.23
SMPD4-206ENST00000433118 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
SMPD4-206ENST00000433118 A2ML1A8K2U0 1454 aa13.63□□□□□ -0.23
SMPD4-206ENST00000433118 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
SMPD4-206ENST00000433118 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
SMPD4-206ENST00000433118 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
SMPD4-206ENST00000433118 NUTM2FA1L443 756 aa13.62□□□□□ -0.23
SMPD4-206ENST00000433118 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
SMPD4-206ENST00000433118 CANXP27824 592 aaKnown RBP13.62□□□□□ -0.23
SMPD4-206ENST00000433118 CABP1Q9NZU7 370 aa13.61□□□□□ -0.23
SMPD4-206ENST00000433118 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
SMPD4-206ENST00000433118 TULP4Q9NRJ4 1543 aa13.61□□□□□ -0.23
SMPD4-206ENST00000433118 TNRQ92752 1358 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.6□□□□□ -0.23
SMPD4-206ENST00000433118 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 ZFYVE9O95405 1425 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 FBLN1P23142 703 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 MTHFSP49914 203 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 CGNL1Q0VF96 1302 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 NCKAP5LQ9HCH0 1330 aa13.6□□□□□ -0.23
SMPD4-206ENST00000433118 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
SMPD4-206ENST00000433118 ALKQ9UM73 1620 aa13.59□□□□□ -0.23
SMPD4-206ENST00000433118 REREQ9P2R6 1566 aa13.59□□□□□ -0.23
SMPD4-206ENST00000433118 METP08581 1390 aa13.59□□□□□ -0.23
SMPD4-206ENST00000433118 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
SMPD4-206ENST00000433118 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
SMPD4-206ENST00000433118 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
SMPD4-206ENST00000433118 RRP7AQ9Y3A4 280 aaKnown RBP13.58□□□□□ -0.24
SMPD4-206ENST00000433118 A0A1W2PP64 1363 aa13.58□□□□□ -0.24
SMPD4-206ENST00000433118 SPATA31D1Q6ZQQ2 1576 aa13.57□□□□□ -0.24
SMPD4-206ENST00000433118 LTKP29376 864 aa13.57□□□□□ -0.24
SMPD4-206ENST00000433118 PTPRMP28827 1452 aa13.57□□□□□ -0.24
SMPD4-206ENST00000433118 WWC1Q8IX03 1113 aa13.57□□□□□ -0.24
SMPD4-206ENST00000433118 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-206ENST00000433118 IGHDP01880 384 aa13.56□□□□□ -0.24
SMPD4-206ENST00000433118 COG6Q9Y2V7 657 aa13.56□□□□□ -0.24
SMPD4-206ENST00000433118 POLR3AO14802 1390 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-206ENST00000433118 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
SMPD4-206ENST00000433118 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
SMPD4-206ENST00000433118 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
SMPD4-206ENST00000433118 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
SMPD4-206ENST00000433118 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMPD4-206ENST00000433118 CLUAP1Q96AJ1 413 aa13.55□□□□□ -0.24
SMPD4-206ENST00000433118 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
SMPD4-206ENST00000433118 GSE1Q14687 1217 aa13.54□□□□□ -0.24
SMPD4-206ENST00000433118 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
SMPD4-206ENST00000433118 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms