RNA–Protein interactions for RNA: ENST00000431716.2

CDRT15-202, CMT1A duplicated region transcript 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDRT15, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-202ENST00000431716 ROBO2Q9HCK4 1378 aa21.49■■□□□ 1.03
CDRT15-202ENST00000431716 CARD11Q9BXL7 1154 aa21.49■■□□□ 1.03
CDRT15-202ENST00000431716 TRAK1Q9UPV9 953 aa21.49■■□□□ 1.03
CDRT15-202ENST00000431716 KNDC1Q76NI1 1749 aa21.49■■□□□ 1.03
CDRT15-202ENST00000431716 DLC1Q96QB1 1528 aa21.48■■□□□ 1.03
CDRT15-202ENST00000431716 POGKQ9P215 609 aa21.45■■□□□ 1.02
CDRT15-202ENST00000431716 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
CDRT15-202ENST00000431716 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
CDRT15-202ENST00000431716 PRAM1Q96QH2 718 aa21.44■■□□□ 1.02
CDRT15-202ENST00000431716 EIF3AQ14152 1382 aaKnown RBP21.42■■□□□ 1.02
CDRT15-202ENST00000431716 DCCP43146 1447 aa21.39■■□□□ 1.02
CDRT15-202ENST00000431716 ADGRL3Q9HAR2 1447 aa21.39■■□□□ 1.02
CDRT15-202ENST00000431716 PLEKHH1Q9ULM0 1364 aa21.39■■□□□ 1.02
CDRT15-202ENST00000431716 ARHGEF28Q8N1W1 1705 aaKnown RBP21.39■■□□□ 1.01
CDRT15-202ENST00000431716 CENPJQ9HC77 1338 aaPredicted RBP21.38■■□□□ 1.01
CDRT15-202ENST00000431716 ROBO1Q9Y6N7 1651 aa21.37■■□□□ 1.01
CDRT15-202ENST00000431716 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
CDRT15-202ENST00000431716 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.37■■□□□ 1.01
CDRT15-202ENST00000431716 BRINP3Q76B58 766 aa21.36■■□□□ 1.01
CDRT15-202ENST00000431716 USP47Q96K76 1375 aa21.34■■□□□ 1.01
CDRT15-202ENST00000431716 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
CDRT15-202ENST00000431716 MINK1Q8N4C8 1332 aaPredicted RBP21.32■■□□□ 1
CDRT15-202ENST00000431716 MST1RQ04912 1400 aa21.32■■□□□ 1
CDRT15-202ENST00000431716 NALCNQ8IZF0 1738 aa21.32■■□□□ 1
CDRT15-202ENST00000431716 SLC24A1O60721 1099 aa21.31■■□□□ 1
CDRT15-202ENST00000431716 ST20-MTHFSA0A0A6YYL1 179 aa21.3■■□□□ 1
CDRT15-202ENST00000431716 EIF4G2P78344 907 aaKnown RBP eCLIP21.3■■□□□ 1
CDRT15-202ENST00000431716 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
CDRT15-202ENST00000431716 CDC42BPGQ6DT37 1551 aa21.28■■□□□ 1
CDRT15-202ENST00000431716 SBNO2Q9Y2G9 1366 aa21.28■■□□□ 1
CDRT15-202ENST00000431716 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
CDRT15-202ENST00000431716 ADGRB2O60241 1585 aa21.27■■□□□ 1
CDRT15-202ENST00000431716 JCADQ9P266 1359 aa21.27■■□□□ 1
CDRT15-202ENST00000431716 WASLO00401 505 aaPredicted RBP21.27■■□□□ 1
CDRT15-202ENST00000431716 C1orf167Q5SNV9 1468 aa21.26■□□□□ 0.99
CDRT15-202ENST00000431716 ORAI2Q96SN7 254 aa21.26■□□□□ 0.99
CDRT15-202ENST00000431716 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
CDRT15-202ENST00000431716 MED1Q15648 1581 aaPredicted RBP21.25■□□□□ 0.99
CDRT15-202ENST00000431716 ESCO1Q5FWF5 840 aa21.25■□□□□ 0.99
CDRT15-202ENST00000431716 EVC2Q86UK5 1308 aa21.25■□□□□ 0.99
CDRT15-202ENST00000431716 PHLPP1O60346 1717 aa21.24■□□□□ 0.99
CDRT15-202ENST00000431716 DDX17Q92841 729 aaKnown RBP21.24■□□□□ 0.99
CDRT15-202ENST00000431716 TESK2Q96S53 571 aa21.24■□□□□ 0.99
CDRT15-202ENST00000431716 CDK19Q9BWU1 502 aa21.24■□□□□ 0.99
CDRT15-202ENST00000431716 HSPA5P11021 654 aaKnown RBP21.23■□□□□ 0.99
CDRT15-202ENST00000431716 LRRC59Q96AG4 307 aaKnown RBP21.23■□□□□ 0.99
CDRT15-202ENST00000431716 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
CDRT15-202ENST00000431716 AHDC1Q5TGY3 1603 aaPredicted RBP21.2■□□□□ 0.98
CDRT15-202ENST00000431716 ANKARQ7Z5J8 1434 aa21.2■□□□□ 0.98
CDRT15-202ENST00000431716 SRPK2P78362 688 aaKnown RBP21.19■□□□□ 0.98
CDRT15-202ENST00000431716 TMF1P82094 1093 aa21.19■□□□□ 0.98
CDRT15-202ENST00000431716 SPATA31A6Q5VVP1 1343 aa21.19■□□□□ 0.98
CDRT15-202ENST00000431716 MEX3CQ5U5Q3 659 aaKnown RBP21.18■□□□□ 0.98
CDRT15-202ENST00000431716 PUS7Q96PZ0 661 aaKnown RBP21.18■□□□□ 0.98
CDRT15-202ENST00000431716 TULP4Q9NRJ4 1543 aa21.18■□□□□ 0.98
CDRT15-202ENST00000431716 NUDT16Q96DE0 195 aaKnown RBP21.17■□□□□ 0.98
CDRT15-202ENST00000431716 COL16A1Q07092 1604 aaPredicted RBP21.17■□□□□ 0.98
CDRT15-202ENST00000431716 NUTM2BA6NNL0 878 aaPredicted RBP21.16■□□□□ 0.98
CDRT15-202ENST00000431716 NUTM2EB1AL46 878 aaPredicted RBP21.16■□□□□ 0.98
CDRT15-202ENST00000431716 CDCA8Q53HL2 280 aa21.16■□□□□ 0.98
CDRT15-202ENST00000431716 NUTM2AQ8IVF1 878 aaPredicted RBP21.16■□□□□ 0.98
CDRT15-202ENST00000431716 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
CDRT15-202ENST00000431716 NPHP3Q7Z494 1330 aa21.15■□□□□ 0.98
CDRT15-202ENST00000431716 FOXO3O43524 673 aa21.15■□□□□ 0.98
CDRT15-202ENST00000431716 CCDC61Q9Y6R9 512 aa21.15■□□□□ 0.98
CDRT15-202ENST00000431716 SOS2Q07890 1332 aaPredicted RBP21.13■□□□□ 0.97
CDRT15-202ENST00000431716 PRR36Q9H6K5 1346 aa21.13■□□□□ 0.97
CDRT15-202ENST00000431716 ATAD2Q6PL18 1390 aa21.12■□□□□ 0.97
CDRT15-202ENST00000431716 PHF8Q9UPP1 1060 aa21.12■□□□□ 0.97
CDRT15-202ENST00000431716 USP32Q8NFA0 1604 aa21.11■□□□□ 0.97
CDRT15-202ENST00000431716 XPCQ01831 940 aaPredicted RBP21.11■□□□□ 0.97
CDRT15-202ENST00000431716 ATP7BP35670 1465 aa21.11■□□□□ 0.97
CDRT15-202ENST00000431716 RGPD8O14715 1765 aaPredicted RBP21.1■□□□□ 0.97
CDRT15-202ENST00000431716 PLEKHG3A1L390 1219 aa21.09■□□□□ 0.97
CDRT15-202ENST00000431716 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
CDRT15-202ENST00000431716 NHSL1Q5SYE7 1610 aa21.08■□□□□ 0.97
CDRT15-202ENST00000431716 ITSN1Q15811 1721 aa21.08■□□□□ 0.97
CDRT15-202ENST00000431716 KRT28Q7Z3Y7 464 aa21.07■□□□□ 0.96
CDRT15-202ENST00000431716 PNPLA6Q8IY17 1366 aa21.07■□□□□ 0.96
CDRT15-202ENST00000431716 KIF1AQ12756 1690 aa21.06■□□□□ 0.96
CDRT15-202ENST00000431716 PPIP5K1Q6PFW1 1433 aa21.06■□□□□ 0.96
CDRT15-202ENST00000431716 PSME1Q06323 249 aa21.06■□□□□ 0.96
CDRT15-202ENST00000431716 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
CDRT15-202ENST00000431716 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
CDRT15-202ENST00000431716 NGDNQ8NEJ9 315 aaKnown RBP21.05■□□□□ 0.96
CDRT15-202ENST00000431716 NINLQ9Y2I6 1382 aa21.04■□□□□ 0.96
CDRT15-202ENST00000431716 TOPAZ1Q8N9V7 1692 aa21.04■□□□□ 0.96
CDRT15-202ENST00000431716 LRP6O75581 1613 aa21.04■□□□□ 0.96
CDRT15-202ENST00000431716 SHPRHQ149N8 1683 aa21.03■□□□□ 0.96
CDRT15-202ENST00000431716 ADAMTS2O95450 1211 aa21.03■□□□□ 0.96
CDRT15-202ENST00000431716 TMC1Q8TDI8 760 aa21.03■□□□□ 0.96
CDRT15-202ENST00000431716 POLR3AO14802 1390 aaPredicted RBP21.02■□□□□ 0.96
CDRT15-202ENST00000431716 ZNF772Q68DY9 489 aaPredicted RBP21.02■□□□□ 0.96
CDRT15-202ENST00000431716 ACEP12821 1306 aa21.02■□□□□ 0.95
CDRT15-202ENST00000431716 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
CDRT15-202ENST00000431716 POTEAQ6S8J7 498 aa21.01■□□□□ 0.95
CDRT15-202ENST00000431716 C8orf37Q96NL8 207 aa21.01■□□□□ 0.95
CDRT15-202ENST00000431716 ZNF692Q9BU19 519 aaPredicted RBP21.01■□□□□ 0.95
CDRT15-202ENST00000431716 LMOD2Q6P5Q4 547 aa21■□□□□ 0.95
CDRT15-202ENST00000431716 SLC12A5Q9H2X9 1139 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 522.7 ms