RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 QTRT2Q9H974 415 aaKnown RBP22.53■■□□□ 1.2
CSNK1E-208ENST00000431611 CDK12Q9NYV4 1490 aaPredicted RBP22.53■■□□□ 1.2
CSNK1E-208ENST00000431611 ESCO1Q5FWF5 840 aa22.52■■□□□ 1.2
CSNK1E-208ENST00000431611 LAMC1P11047 1609 aa22.52■■□□□ 1.2
CSNK1E-208ENST00000431611 WAPLQ7Z5K2 1190 aa22.51■■□□□ 1.19
CSNK1E-208ENST00000431611 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-208ENST00000431611 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-208ENST00000431611 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-208ENST00000431611 TMEM132EQ6IEE7 984 aa22.5■■□□□ 1.19
CSNK1E-208ENST00000431611 NPHP3Q7Z494 1330 aa22.49■■□□□ 1.19
CSNK1E-208ENST00000431611 ABCC11Q96J66 1382 aa22.49■■□□□ 1.19
CSNK1E-208ENST00000431611 TECPR2O15040 1411 aa22.48■■□□□ 1.19
CSNK1E-208ENST00000431611 CDC42BPGQ6DT37 1551 aa22.48■■□□□ 1.19
CSNK1E-208ENST00000431611 PIK3C2GO75747 1445 aa22.47■■□□□ 1.19
CSNK1E-208ENST00000431611 NUTM2FA1L443 756 aa22.46■■□□□ 1.19
CSNK1E-208ENST00000431611 FOXO3O43524 673 aa22.45■■□□□ 1.18
CSNK1E-208ENST00000431611 USP21Q9UK80 565 aa22.44■■□□□ 1.18
CSNK1E-208ENST00000431611 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
CSNK1E-208ENST00000431611 RGS12O14924 1447 aa22.43■■□□□ 1.18
CSNK1E-208ENST00000431611 XPCQ01831 940 aaPredicted RBP22.43■■□□□ 1.18
CSNK1E-208ENST00000431611 IFT172Q9UG01 1749 aa22.43■■□□□ 1.18
CSNK1E-208ENST00000431611 YTHDC2Q9H6S0 1430 aaKnown RBP22.42■■□□□ 1.18
CSNK1E-208ENST00000431611 FNBP4Q8N3X1 1017 aaPredicted RBP22.42■■□□□ 1.18
CSNK1E-208ENST00000431611 C14orf93Q9H972 538 aaKnown RBP22.42■■□□□ 1.18
CSNK1E-208ENST00000431611 SIRT1Q96EB6 747 aa22.41■■□□□ 1.18
CSNK1E-208ENST00000431611 PXDNQ92626 1479 aa22.41■■□□□ 1.18
CSNK1E-208ENST00000431611 TRPC5Q9UL62 973 aaPredicted RBP22.4■■□□□ 1.18
CSNK1E-208ENST00000431611 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
CSNK1E-208ENST00000431611 MYOM2P54296 1465 aa22.39■■□□□ 1.17
CSNK1E-208ENST00000431611 COL22A1Q8NFW1 1626 aaPredicted RBP22.38■■□□□ 1.17
CSNK1E-208ENST00000431611 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
CSNK1E-208ENST00000431611 DHX57Q6P158 1386 aaKnown RBP22.37■■□□□ 1.17
CSNK1E-208ENST00000431611 RAB3GAP2Q9H2M9 1393 aa22.36■■□□□ 1.17
CSNK1E-208ENST00000431611 NRXN1Q9ULB1 1477 aa22.35■■□□□ 1.17
CSNK1E-208ENST00000431611 SPATA31A3Q5VYP0 1347 aa22.32■■□□□ 1.16
CSNK1E-208ENST00000431611 ATRNO75882 1429 aa22.32■■□□□ 1.16
CSNK1E-208ENST00000431611 KRT28Q7Z3Y7 464 aa22.32■■□□□ 1.16
CSNK1E-208ENST00000431611 PRAM1Q96QH2 718 aa22.32■■□□□ 1.16
CSNK1E-208ENST00000431611 SAFB2Q14151 953 aaKnown RBP eCLIP22.31■■□□□ 1.16
CSNK1E-208ENST00000431611 PHF8Q9UPP1 1060 aa22.31■■□□□ 1.16
CSNK1E-208ENST00000431611 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
CSNK1E-208ENST00000431611 BCL9LQ86UU0 1499 aa22.29■■□□□ 1.16
CSNK1E-208ENST00000431611 ATAD2Q6PL18 1390 aa22.29■■□□□ 1.16
CSNK1E-208ENST00000431611 POGKQ9P215 609 aa22.29■■□□□ 1.16
CSNK1E-208ENST00000431611 PSME1Q06323 249 aa22.28■■□□□ 1.16
CSNK1E-208ENST00000431611 KIF1AQ12756 1690 aa22.27■■□□□ 1.16
CSNK1E-208ENST00000431611 GJD4Q96KN9 370 aaPredicted RBP22.26■■□□□ 1.15
CSNK1E-208ENST00000431611 HAP1P54257 671 aaPredicted RBP22.24■■□□□ 1.15
CSNK1E-208ENST00000431611 UNC5CLQ8IV45 518 aa22.24■■□□□ 1.15
CSNK1E-208ENST00000431611 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
CSNK1E-208ENST00000431611 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
CSNK1E-208ENST00000431611 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
CSNK1E-208ENST00000431611 TRAK1Q9UPV9 953 aa22.23■■□□□ 1.15
CSNK1E-208ENST00000431611 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
CSNK1E-208ENST00000431611 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
CSNK1E-208ENST00000431611 PMFBP1Q8TBY8 1022 aa22.21■■□□□ 1.15
CSNK1E-208ENST00000431611 CABLES1Q8TDN4 633 aa22.21■■□□□ 1.15
CSNK1E-208ENST00000431611 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
CSNK1E-208ENST00000431611 SLIT2O94813 1529 aa22.21■■□□□ 1.15
CSNK1E-208ENST00000431611 PLEKHG5O94827 1062 aa22.2■■□□□ 1.14
CSNK1E-208ENST00000431611 ANKARQ7Z5J8 1434 aa22.2■■□□□ 1.14
CSNK1E-208ENST00000431611 ADGRB1O14514 1584 aa22.2■■□□□ 1.14
CSNK1E-208ENST00000431611 MARF1Q9Y4F3 1742 aaKnown RBP22.2■■□□□ 1.14
CSNK1E-208ENST00000431611 HRCP23327 699 aa22.19■■□□□ 1.14
CSNK1E-208ENST00000431611 STAC3Q96MF2 364 aa22.19■■□□□ 1.14
CSNK1E-208ENST00000431611 HIRIP3Q9BW71 556 aaPredicted RBP22.19■■□□□ 1.14
CSNK1E-208ENST00000431611 ARHGEF10O15013 1369 aa22.17■■□□□ 1.14
CSNK1E-208ENST00000431611 MINK1Q8N4C8 1332 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-208ENST00000431611 USP32Q8NFA0 1604 aa22.17■■□□□ 1.14
CSNK1E-208ENST00000431611 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
CSNK1E-208ENST00000431611 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
CSNK1E-208ENST00000431611 RGPD8O14715 1765 aaPredicted RBP22.15■■□□□ 1.14
CSNK1E-208ENST00000431611 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.14
CSNK1E-208ENST00000431611 ADGRB2O60241 1585 aa22.14■■□□□ 1.13
CSNK1E-208ENST00000431611 WASLO00401 505 aaPredicted RBP22.13■■□□□ 1.13
CSNK1E-208ENST00000431611 VPS72Q15906 364 aa22.13■■□□□ 1.13
CSNK1E-208ENST00000431611 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.13■■□□□ 1.13
CSNK1E-208ENST00000431611 PRR36Q9H6K5 1346 aa22.12■■□□□ 1.13
CSNK1E-208ENST00000431611 GLI3P10071 1580 aa22.12■■□□□ 1.13
CSNK1E-208ENST00000431611 GPRASP1Q5JY77 1395 aa22.12■■□□□ 1.13
CSNK1E-208ENST00000431611 CCDC9Q9Y3X0 531 aaKnown RBP22.11■■□□□ 1.13
CSNK1E-208ENST00000431611 FAM83GA6ND36 823 aa22.09■■□□□ 1.13
CSNK1E-208ENST00000431611 SEPT12Q8IYM1 358 aa22.09■■□□□ 1.13
CSNK1E-208ENST00000431611 TULP4Q9NRJ4 1543 aa22.09■■□□□ 1.13
CSNK1E-208ENST00000431611 NGDNQ8NEJ9 315 aaKnown RBP22.08■■□□□ 1.13
CSNK1E-208ENST00000431611 ZRANB1Q9UGI0 708 aa22.08■■□□□ 1.13
CSNK1E-208ENST00000431611 ONECUT3O60422 494 aaPredicted RBP22.06■■□□□ 1.12
CSNK1E-208ENST00000431611 PAK3O75914 559 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-208ENST00000431611 BLMP54132 1417 aaPredicted RBP22.04■■□□□ 1.12
CSNK1E-208ENST00000431611 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
CSNK1E-208ENST00000431611 BTG4Q9NY30 223 aa22.03■■□□□ 1.12
CSNK1E-208ENST00000431611 ABCA3Q99758 1704 aa22.03■■□□□ 1.12
CSNK1E-208ENST00000431611 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
CSNK1E-208ENST00000431611 PLCH1Q4KWH8 1693 aa22.02■■□□□ 1.12
CSNK1E-208ENST00000431611 TRPM3Q9HCF6 1732 aaPredicted RBP22.02■■□□□ 1.12
CSNK1E-208ENST00000431611 KRT27Q7Z3Y8 459 aa22.01■■□□□ 1.11
CSNK1E-208ENST00000431611 EP400Q96L91 3159 aa22.01■■□□□ 1.11
CSNK1E-208ENST00000431611 A0A0G2JS52 829 aa22■■□□□ 1.11
CSNK1E-208ENST00000431611 MYT1Q01538 1121 aa22■■□□□ 1.11
CSNK1E-208ENST00000431611 SF3B2Q13435 895 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms