RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 CADPS2Q86UW7 1296 aa26.2■■□□□ 1.78
RFTN1-202ENST00000431547 DCCP43146 1447 aa26.2■■□□□ 1.78
RFTN1-202ENST00000431547 FBXO41Q8TF61 875 aa26.19■■□□□ 1.78
RFTN1-202ENST00000431547 SAFB2Q14151 953 aaKnown RBP eCLIP26.17■■□□□ 1.78
RFTN1-202ENST00000431547 SLAIN2Q9P270 581 aa26.15■■□□□ 1.78
RFTN1-202ENST00000431547 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.14■■□□□ 1.77
RFTN1-202ENST00000431547 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
RFTN1-202ENST00000431547 NALCNQ8IZF0 1738 aa26.12■■□□□ 1.77
RFTN1-202ENST00000431547 ARHGEF28Q8N1W1 1705 aaKnown RBP26.11■■□□□ 1.77
RFTN1-202ENST00000431547 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
RFTN1-202ENST00000431547 MINK1Q8N4C8 1332 aaPredicted RBP26.1■■□□□ 1.77
RFTN1-202ENST00000431547 PIP4K2BP78356 416 aa26.09■■□□□ 1.77
RFTN1-202ENST00000431547 CDC42BPGQ6DT37 1551 aa26.08■■□□□ 1.77
RFTN1-202ENST00000431547 MST1RQ04912 1400 aa26.07■■□□□ 1.76
RFTN1-202ENST00000431547 HIRIP3Q9BW71 556 aaPredicted RBP26.07■■□□□ 1.76
RFTN1-202ENST00000431547 WASLO00401 505 aaPredicted RBP26.05■■□□□ 1.76
RFTN1-202ENST00000431547 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
RFTN1-202ENST00000431547 ADGRB2O60241 1585 aa26.04■■□□□ 1.76
RFTN1-202ENST00000431547 C1orf167Q5SNV9 1468 aa26.02■■□□□ 1.76
RFTN1-202ENST00000431547 USP47Q96K76 1375 aa26.01■■□□□ 1.75
RFTN1-202ENST00000431547 SBNO2Q9Y2G9 1366 aa25.99■■□□□ 1.75
RFTN1-202ENST00000431547 ST20-MTHFSA0A0A6YYL1 179 aa25.99■■□□□ 1.75
RFTN1-202ENST00000431547 BRINP3Q76B58 766 aa25.99■■□□□ 1.75
RFTN1-202ENST00000431547 CDK19Q9BWU1 502 aa25.99■■□□□ 1.75
RFTN1-202ENST00000431547 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
RFTN1-202ENST00000431547 ILDR1Q86SU0 546 aaPredicted RBP25.97■■□□□ 1.75
RFTN1-202ENST00000431547 ANKARQ7Z5J8 1434 aa25.97■■□□□ 1.75
RFTN1-202ENST00000431547 ORAI2Q96SN7 254 aa25.96■■□□□ 1.75
RFTN1-202ENST00000431547 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
RFTN1-202ENST00000431547 FMN2Q9NZ56 1722 aa25.95■■□□□ 1.74
RFTN1-202ENST00000431547 SLC24A1O60721 1099 aa25.95■■□□□ 1.74
RFTN1-202ENST00000431547 ESCO1Q5FWF5 840 aa25.95■■□□□ 1.74
RFTN1-202ENST00000431547 TESK2Q96S53 571 aa25.95■■□□□ 1.74
RFTN1-202ENST00000431547 QRICH2Q9H0J4 1663 aa25.95■■□□□ 1.74
RFTN1-202ENST00000431547 EIF4G2P78344 907 aaKnown RBP eCLIP25.93■■□□□ 1.74
RFTN1-202ENST00000431547 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
RFTN1-202ENST00000431547 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
RFTN1-202ENST00000431547 NUDT16Q96DE0 195 aaKnown RBP25.92■■□□□ 1.74
RFTN1-202ENST00000431547 ROBO1Q9Y6N7 1651 aa25.92■■□□□ 1.74
RFTN1-202ENST00000431547 SRPK2P78362 688 aaKnown RBP25.91■■□□□ 1.74
RFTN1-202ENST00000431547 CABP2Q9NPB3 220 aa25.9■■□□□ 1.74
RFTN1-202ENST00000431547 HSPA1LP34931 641 aa25.89■■□□□ 1.74
RFTN1-202ENST00000431547 ZEB1P37275 1124 aaPredicted RBP25.88■■□□□ 1.73
RFTN1-202ENST00000431547 PHF8Q9UPP1 1060 aa25.88■■□□□ 1.73
RFTN1-202ENST00000431547 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
RFTN1-202ENST00000431547 HSPA5P11021 654 aaKnown RBP25.87■■□□□ 1.73
RFTN1-202ENST00000431547 ATP7BP35670 1465 aa25.86■■□□□ 1.73
RFTN1-202ENST00000431547 USP32Q8NFA0 1604 aa25.86■■□□□ 1.73
RFTN1-202ENST00000431547 PUS7Q96PZ0 661 aaKnown RBP25.86■■□□□ 1.73
RFTN1-202ENST00000431547 FOXO3O43524 673 aa25.84■■□□□ 1.73
RFTN1-202ENST00000431547 TMF1P82094 1093 aa25.84■■□□□ 1.73
RFTN1-202ENST00000431547 NPHP3Q7Z494 1330 aa25.83■■□□□ 1.73
RFTN1-202ENST00000431547 AHDC1Q5TGY3 1603 aaPredicted RBP25.82■■□□□ 1.72
RFTN1-202ENST00000431547 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
RFTN1-202ENST00000431547 PMFBP1Q8TBY8 1022 aa25.82■■□□□ 1.72
RFTN1-202ENST00000431547 DDX17Q92841 729 aaKnown RBP25.82■■□□□ 1.72
RFTN1-202ENST00000431547 ATAD2Q6PL18 1390 aa25.81■■□□□ 1.72
RFTN1-202ENST00000431547 SOS2Q07890 1332 aaPredicted RBP25.8■■□□□ 1.72
RFTN1-202ENST00000431547 CDCA8Q53HL2 280 aa25.78■■□□□ 1.72
RFTN1-202ENST00000431547 NGDNQ8NEJ9 315 aaKnown RBP25.78■■□□□ 1.72
RFTN1-202ENST00000431547 CABP1Q9NZU7 370 aa25.78■■□□□ 1.72
RFTN1-202ENST00000431547 DISP3Q9P2K9 1392 aa25.78■■□□□ 1.72
RFTN1-202ENST00000431547 PPIP5K1Q6PFW1 1433 aa25.78■■□□□ 1.72
RFTN1-202ENST00000431547 KIF1AQ12756 1690 aa25.77■■□□□ 1.72
RFTN1-202ENST00000431547 NHSL1Q5SYE7 1610 aa25.77■■□□□ 1.72
RFTN1-202ENST00000431547 PSME1Q06323 249 aa25.76■■□□□ 1.71
RFTN1-202ENST00000431547 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
RFTN1-202ENST00000431547 LRRC59Q96AG4 307 aaKnown RBP25.76■■□□□ 1.71
RFTN1-202ENST00000431547 RGPD8O14715 1765 aaPredicted RBP25.76■■□□□ 1.71
RFTN1-202ENST00000431547 POLR3AO14802 1390 aaPredicted RBP25.75■■□□□ 1.71
RFTN1-202ENST00000431547 ACEP12821 1306 aa25.75■■□□□ 1.71
RFTN1-202ENST00000431547 PXDNQ92626 1479 aa25.73■■□□□ 1.71
RFTN1-202ENST00000431547 XPCQ01831 940 aaPredicted RBP25.73■■□□□ 1.71
RFTN1-202ENST00000431547 PHLPP1O60346 1717 aa25.73■■□□□ 1.71
RFTN1-202ENST00000431547 TOPAZ1Q8N9V7 1692 aa25.73■■□□□ 1.71
RFTN1-202ENST00000431547 COL16A1Q07092 1604 aaPredicted RBP25.73■■□□□ 1.71
RFTN1-202ENST00000431547 ITSN1Q15811 1721 aa25.72■■□□□ 1.71
RFTN1-202ENST00000431547 TMC1Q8TDI8 760 aa25.69■■□□□ 1.7
RFTN1-202ENST00000431547 JCADQ9P266 1359 aa25.69■■□□□ 1.7
RFTN1-202ENST00000431547 ZNF692Q9BU19 519 aaPredicted RBP25.68■■□□□ 1.7
RFTN1-202ENST00000431547 SLC12A5Q9H2X9 1139 aa25.68■■□□□ 1.7
RFTN1-202ENST00000431547 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
RFTN1-202ENST00000431547 NINLQ9Y2I6 1382 aa25.68■■□□□ 1.7
RFTN1-202ENST00000431547 SPATA31A3Q5VYP0 1347 aa25.66■■□□□ 1.7
RFTN1-202ENST00000431547 CPSF1Q10570 1443 aaKnown RBP25.64■■□□□ 1.7
RFTN1-202ENST00000431547 C11orf95C9JLR9 678 aaPredicted RBP25.64■■□□□ 1.7
RFTN1-202ENST00000431547 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
RFTN1-202ENST00000431547 TERF2IPQ9NYB0 399 aa25.63■■□□□ 1.69
RFTN1-202ENST00000431547 PNPLA6Q8IY17 1366 aa25.62■■□□□ 1.69
RFTN1-202ENST00000431547 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
RFTN1-202ENST00000431547 TNS3Q68CZ2 1445 aa25.62■■□□□ 1.69
RFTN1-202ENST00000431547 USP6P35125 1406 aa25.61■■□□□ 1.69
RFTN1-202ENST00000431547 PAK3O75914 559 aaPredicted RBP25.6■■□□□ 1.69
RFTN1-202ENST00000431547 CD163L1Q9NR16 1453 aa25.6■■□□□ 1.69
RFTN1-202ENST00000431547 SPATA31A6Q5VVP1 1343 aa25.59■■□□□ 1.69
RFTN1-202ENST00000431547 ARHGEF10O15013 1369 aa25.58■■□□□ 1.69
RFTN1-202ENST00000431547 KTN1Q86UP2 1357 aaKnown RBP25.58■■□□□ 1.69
RFTN1-202ENST00000431547 SSH2Q76I76 1423 aa25.58■■□□□ 1.69
RFTN1-202ENST00000431547 POLR3GLQ9BT43 218 aa25.58■■□□□ 1.69
RFTN1-202ENST00000431547 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms