RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 GTF2E1P29083 439 aaPredicted RBP17.48■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 ZNF445P59923 1031 aa17.48■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 ADCY10Q96PN6 1610 aa17.48■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 LETM1O95202 739 aaPredicted RBP17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 TESK2Q96S53 571 aa17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 PANK3Q9H999 370 aa17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.47■□□□□ 0.39
CSNK1A1P1-201ENST00000430593 PPP2R1AP30153 589 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 RBM25P49756 843 aaKnown RBP17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 BBXQ8WY36 941 aaPredicted RBP17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 ZKSCAN5Q9Y2L8 839 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 STAC3Q96MF2 364 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 SHANK2Q9UPX8 1470 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 SYNMO15061 1565 aa17.45■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 CANXP27824 592 aaKnown RBP17.44■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 WDR7Q9Y4E6 1490 aa17.44■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 TAF3Q5VWG9 929 aa17.44■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PDIA4P13667 645 aaKnown RBP17.43■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 SPINK5Q9NQ38 1064 aaPredicted RBP17.42■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 GOLGA6L22H0YM25 854 aa17.42■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 COG6Q9Y2V7 657 aa17.42■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PRDM10Q9NQV6 1147 aa17.41■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 ZNF644Q9H582 1327 aaPredicted RBP17.4■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PLB1Q6P1J6 1458 aa17.4■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.38
CSNK1A1P1-201ENST00000430593 UHRF1BP1LA0JNW5 1464 aa17.38■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 TMF1P82094 1093 aa17.38■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 MYRIPQ8NFW9 859 aa17.38■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 CCDC39Q9UFE4 941 aa17.37■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 NAP1L2Q9ULW6 460 aaPredicted RBP17.37■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 AMER1Q5JTC6 1135 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 IPO4Q8TEX9 1081 aaKnown RBP17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 BCL11BQ9C0K0 894 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 ABCA8O94911 1581 aa17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 NUP155O75694 1391 aa17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 PRIMPOLQ96LW4 560 aa17.36■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 KDM2AQ9Y2K7 1162 aa17.35■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 MYO5CQ9NQX4 1742 aa17.35■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 DDX49Q9Y6V7 483 aaKnown RBP17.33■□□□□ 0.37
CSNK1A1P1-201ENST00000430593 ARID3CA6NKF2 412 aa17.33■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 APAF1O14727 1248 aa17.33■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 TMEM51Q9NW97 253 aa17.33■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 A2MP01023 1474 aa17.33■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 MYOM1P52179 1685 aa17.32■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 KNSTRNQ9Y448 316 aa17.32■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 IQGAP1P46940 1657 aa17.31■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 GPATCH8Q9UKJ3 1502 aaKnown RBP17.31■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 BAG4O95429 457 aaKnown RBP17.31■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 ZSCAN23Q3MJ62 389 aa17.31■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 TAF7LQ5H9L4 462 aa17.3■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 KANK1Q14678 1352 aa17.3■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 ZCCHC11Q5TAX3 1644 aaKnown RBP17.3■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 K7ELQ4 463 aaPredicted RBP17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 RBSNQ9H1K0 784 aa17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 RLBP1P12271 317 aa17.29■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 NBPF1Q3BBV0 1214 aa17.28■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 REREQ9P2R6 1566 aa17.27■□□□□ 0.36
CSNK1A1P1-201ENST00000430593 SSFA2P28290 1259 aa17.27■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 KIF2CQ99661 725 aa17.27■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 IQSEC2Q5JU85 1478 aa17.27■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 C9orf84Q5VXU9 1444 aa17.25■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 ARID3AQ99856 593 aa17.25■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CYP2E1P05181 493 aaPredicted RBP17.24■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 LMBRD1Q9NUN5 540 aa17.24■□□□□ 0.35
CSNK1A1P1-201ENST00000430593 CFDP1Q9UEE9 299 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms