RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 SETQ01105 290 aaPredicted RBP8.54□□□□□ -1.04
CPS1-203ENST00000430249 ANO2Q9NQ90 1003 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 BRMS1Q9HCU9 246 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 SLC52A1Q9NWF4 448 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
CPS1-203ENST00000430249 ABCA10Q8WWZ4 1543 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 IPO7O95373 1038 aaKnown RBP8.54□□□□□ -1.04
CPS1-203ENST00000430249 CCDC30Q5VVM6 783 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 RAPGEF4Q8WZA2 1011 aa8.54□□□□□ -1.04
CPS1-203ENST00000430249 ATAD2Q6PL18 1390 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 SAFBQ15424 915 aaKnown RBP eCLIP8.53□□□□□ -1.04
CPS1-203ENST00000430249 GCC1Q96CN9 775 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 ATF3P18847 181 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
CPS1-203ENST00000430249 XBP1P17861 261 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 GSE1Q14687 1217 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 LTV1Q96GA3 475 aaPredicted RBP8.53□□□□□ -1.04
CPS1-203ENST00000430249 NAT10Q9H0A0 1025 aaKnown RBP8.53□□□□□ -1.04
CPS1-203ENST00000430249 APAF1O14727 1248 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 TSPYL4Q9UJ04 414 aa8.53□□□□□ -1.04
CPS1-203ENST00000430249 CPLX1O14810 134 aa8.52□□□□□ -1.04
CPS1-203ENST00000430249 PDE3AQ14432 1141 aa8.52□□□□□ -1.04
CPS1-203ENST00000430249 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.04
CPS1-203ENST00000430249 CNTROBQ8N137 903 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 CCP110O43303 1012 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 PLEKHO1Q53GL0 409 aaPredicted RBP8.52□□□□□ -1.05
CPS1-203ENST00000430249 TCEAL9Q9UHQ7 104 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 KIF14Q15058 1648 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 IQGAP2Q13576 1575 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 GZF1Q9H116 711 aaPredicted RBP8.52□□□□□ -1.05
CPS1-203ENST00000430249 ACBD3Q9H3P7 528 aa8.52□□□□□ -1.05
CPS1-203ENST00000430249 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
CPS1-203ENST00000430249 RRP7AQ9Y3A4 280 aaKnown RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 CDR1P51861 262 aa8.51□□□□□ -1.05
CPS1-203ENST00000430249 PIP4K2AP48426 406 aaPredicted RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 NUTM2DQ5VT03 806 aaPredicted RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 SMC3Q9UQE7 1217 aa8.51□□□□□ -1.05
CPS1-203ENST00000430249 POLA1P09884 1462 aaPredicted RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
CPS1-203ENST00000430249 FKBP5Q13451 457 aaPredicted RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.51□□□□□ -1.05
CPS1-203ENST00000430249 FAM69CQ0P6D2 419 aa8.5□□□□□ -1.05
CPS1-203ENST00000430249 COG6Q9Y2V7 657 aa8.5□□□□□ -1.05
CPS1-203ENST00000430249 ERBINQ96RT1 1412 aa8.5□□□□□ -1.05
CPS1-203ENST00000430249 THOC2Q8NI27 1593 aaKnown RBP8.5□□□□□ -1.05
CPS1-203ENST00000430249 SLC3A2P08195 630 aaKnown RBP8.5□□□□□ -1.05
CPS1-203ENST00000430249 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
CPS1-203ENST00000430249 CCDC73Q6ZRK6 1079 aa8.5□□□□□ -1.05
CPS1-203ENST00000430249 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
CPS1-203ENST00000430249 MAGI1Q96QZ7 1491 aaPredicted RBP8.5□□□□□ -1.05
CPS1-203ENST00000430249 CCT4P50991 539 aaKnown RBP8.49□□□□□ -1.05
CPS1-203ENST00000430249 MTERF4Q7Z6M4 381 aaKnown RBP8.49□□□□□ -1.05
CPS1-203ENST00000430249 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
CPS1-203ENST00000430249 PDCP20941 246 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 MBD3O95983 291 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
CPS1-203ENST00000430249 SASS6Q6UVJ0 657 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 VPS53Q5VIR6 699 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 TEX35Q5T0J7 233 aa8.49□□□□□ -1.05
CPS1-203ENST00000430249 THEMISQ8N1K5 641 aaPredicted RBP8.49□□□□□ -1.05
CPS1-203ENST00000430249 RABEP1Q15276 862 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 RALYLQ86SE5 291 aaKnown RBP8.48□□□□□ -1.05
CPS1-203ENST00000430249 TBC1D2BQ9UPU7 963 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 ANKRD1Q15327 319 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 CWC22Q9HCG8 908 aaKnown RBP8.48□□□□□ -1.05
CPS1-203ENST00000430249 RTN4Q9NQC3 1192 aaKnown RBP8.48□□□□□ -1.05
CPS1-203ENST00000430249 CCDC39Q9UFE4 941 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 PPP6R1Q9UPN7 881 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
CPS1-203ENST00000430249 KIF6Q6ZMV9 814 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 TXLNBQ8N3L3 684 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 ARGLU1Q9NWB6 273 aaPredicted RBP8.48□□□□□ -1.05
CPS1-203ENST00000430249 NFXL1Q6ZNB6 911 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 RIC3Q7Z5B4 369 aa8.48□□□□□ -1.05
CPS1-203ENST00000430249 OLFM4Q6UX06 510 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 C22orf23Q9BZE7 217 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 EPRSP07814 1512 aaKnown RBP8.47□□□□□ -1.05
CPS1-203ENST00000430249 PPP2R1AP30153 589 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
CPS1-203ENST00000430249 EIF2S2P20042 333 aaKnown RBP8.47□□□□□ -1.05
CPS1-203ENST00000430249 RDXP35241 583 aaKnown RBP8.47□□□□□ -1.05
CPS1-203ENST00000430249 MCTP1Q6DN14 999 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 ZSCAN25Q6NSZ9 544 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 ZNF396Q96N95 335 aaPredicted RBP8.47□□□□□ -1.05
CPS1-203ENST00000430249 MYO6Q9UM54 1294 aa8.47□□□□□ -1.05
CPS1-203ENST00000430249 PEG3Q9GZU2 1588 aa8.46□□□□□ -1.05
CPS1-203ENST00000430249 ABCC11Q96J66 1382 aa8.46□□□□□ -1.05
CPS1-203ENST00000430249 NOL8Q76FK4 1167 aaKnown RBP8.46□□□□□ -1.05
CPS1-203ENST00000430249 NSD2O96028 1365 aa8.46□□□□□ -1.05
CPS1-203ENST00000430249 MEX3CQ5U5Q3 659 aaKnown RBP8.46□□□□□ -1.05
CPS1-203ENST00000430249 BICD2Q8TD16 824 aa8.46□□□□□ -1.05
CPS1-203ENST00000430249 GNL3LQ9NVN8 582 aaKnown RBP8.46□□□□□ -1.05
CPS1-203ENST00000430249 ERCC4Q92889 916 aaPredicted RBP8.46□□□□□ -1.06
CPS1-203ENST00000430249 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.46□□□□□ -1.06
CPS1-203ENST00000430249 AK7Q96M32 723 aa8.46□□□□□ -1.06
CPS1-203ENST00000430249 FAM135AQ9P2D6 1515 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms