RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 POTEAQ6S8J7 498 aa24.9■■□□□ 1.58
UBE3D-204ENST00000430071 YTHDC2Q9H6S0 1430 aaKnown RBP24.89■■□□□ 1.58
UBE3D-204ENST00000430071 C14orf93Q9H972 538 aaKnown RBP24.89■■□□□ 1.57
UBE3D-204ENST00000430071 ABCC11Q96J66 1382 aa24.88■■□□□ 1.57
UBE3D-204ENST00000430071 LAMC1P11047 1609 aa24.87■■□□□ 1.57
UBE3D-204ENST00000430071 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
UBE3D-204ENST00000430071 KDM2AQ9Y2K7 1162 aa24.84■■□□□ 1.57
UBE3D-204ENST00000430071 NUTM2FA1L443 756 aa24.83■■□□□ 1.57
UBE3D-204ENST00000430071 PCGF6Q9BYE7 350 aa24.83■■□□□ 1.57
UBE3D-204ENST00000430071 FMN2Q9NZ56 1722 aa24.83■■□□□ 1.57
UBE3D-204ENST00000430071 SPATA31A6Q5VVP1 1343 aa24.82■■□□□ 1.56
UBE3D-204ENST00000430071 NUTM2BA6NNL0 878 aaPredicted RBP24.81■■□□□ 1.56
UBE3D-204ENST00000430071 NUTM2EB1AL46 878 aaPredicted RBP24.81■■□□□ 1.56
UBE3D-204ENST00000430071 NUTM2AQ8IVF1 878 aaPredicted RBP24.81■■□□□ 1.56
UBE3D-204ENST00000430071 DHX57Q6P158 1386 aaKnown RBP24.81■■□□□ 1.56
UBE3D-204ENST00000430071 DCAF11Q8TEB1 546 aa24.8■■□□□ 1.56
UBE3D-204ENST00000430071 ADGRB1O14514 1584 aa24.79■■□□□ 1.56
UBE3D-204ENST00000430071 PNPLA6Q8IY17 1366 aa24.78■■□□□ 1.56
UBE3D-204ENST00000430071 LRRC59Q96AG4 307 aaKnown RBP24.78■■□□□ 1.56
UBE3D-204ENST00000430071 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
UBE3D-204ENST00000430071 ESCO1Q5FWF5 840 aa24.77■■□□□ 1.56
UBE3D-204ENST00000430071 SOS2Q07890 1332 aaPredicted RBP24.76■■□□□ 1.55
UBE3D-204ENST00000430071 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
UBE3D-204ENST00000430071 XPCQ01831 940 aaPredicted RBP24.73■■□□□ 1.55
UBE3D-204ENST00000430071 SIRT1Q96EB6 747 aa24.73■■□□□ 1.55
UBE3D-204ENST00000430071 PRAM1Q96QH2 718 aa24.73■■□□□ 1.55
UBE3D-204ENST00000430071 FOXO3O43524 673 aa24.71■■□□□ 1.55
UBE3D-204ENST00000430071 PXDNQ92626 1479 aa24.71■■□□□ 1.55
UBE3D-204ENST00000430071 DLC1Q96QB1 1528 aa24.71■■□□□ 1.55
UBE3D-204ENST00000430071 TRAK1Q9UPV9 953 aa24.7■■□□□ 1.55
UBE3D-204ENST00000430071 USP32Q8NFA0 1604 aa24.69■■□□□ 1.54
UBE3D-204ENST00000430071 ARHGEF28Q8N1W1 1705 aaKnown RBP24.68■■□□□ 1.54
UBE3D-204ENST00000430071 COL22A1Q8NFW1 1626 aaPredicted RBP24.67■■□□□ 1.54
UBE3D-204ENST00000430071 POGKQ9P215 609 aa24.66■■□□□ 1.54
UBE3D-204ENST00000430071 KIF1AQ12756 1690 aa24.65■■□□□ 1.54
UBE3D-204ENST00000430071 AFF2P51816 1311 aa24.65■■□□□ 1.54
UBE3D-204ENST00000430071 HIRIP3Q9BW71 556 aaPredicted RBP24.65■■□□□ 1.54
UBE3D-204ENST00000430071 NPHP3Q7Z494 1330 aa24.64■■□□□ 1.54
UBE3D-204ENST00000430071 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.53
UBE3D-204ENST00000430071 ADAMTS2O95450 1211 aa24.64■■□□□ 1.53
UBE3D-204ENST00000430071 ADGRB2O60241 1585 aa24.63■■□□□ 1.53
UBE3D-204ENST00000430071 C8orf37Q96NL8 207 aa24.63■■□□□ 1.53
UBE3D-204ENST00000430071 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
UBE3D-204ENST00000430071 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
UBE3D-204ENST00000430071 ZNF772Q68DY9 489 aaPredicted RBP24.61■■□□□ 1.53
UBE3D-204ENST00000430071 STAC3Q96MF2 364 aa24.6■■□□□ 1.53
UBE3D-204ENST00000430071 SIN3AQ96ST3 1273 aa24.6■■□□□ 1.53
UBE3D-204ENST00000430071 PHF8Q9UPP1 1060 aa24.58■■□□□ 1.53
UBE3D-204ENST00000430071 NBPF1Q3BBV0 1214 aa24.57■■□□□ 1.52
UBE3D-204ENST00000430071 PRR36Q9H6K5 1346 aa24.56■■□□□ 1.52
UBE3D-204ENST00000430071 KRT28Q7Z3Y7 464 aa24.56■■□□□ 1.52
UBE3D-204ENST00000430071 PMFBP1Q8TBY8 1022 aa24.55■■□□□ 1.52
UBE3D-204ENST00000430071 NGLY1Q96IV0 654 aa24.54■■□□□ 1.52
UBE3D-204ENST00000430071 SPATA31A3Q5VYP0 1347 aa24.54■■□□□ 1.52
UBE3D-204ENST00000430071 TRPM3Q9HCF6 1732 aaPredicted RBP24.52■■□□□ 1.52
UBE3D-204ENST00000430071 RXRBP28702 533 aa24.52■■□□□ 1.52
UBE3D-204ENST00000430071 L3MBTL2Q969R5 705 aa24.52■■□□□ 1.52
UBE3D-204ENST00000430071 QTRT2Q9H974 415 aaKnown RBP24.52■■□□□ 1.52
UBE3D-204ENST00000430071 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
UBE3D-204ENST00000430071 ABCA3Q99758 1704 aa24.51■■□□□ 1.51
UBE3D-204ENST00000430071 WASLO00401 505 aaPredicted RBP24.51■■□□□ 1.51
UBE3D-204ENST00000430071 TULP4Q9NRJ4 1543 aa24.51■■□□□ 1.51
UBE3D-204ENST00000430071 PLEKHG5O94827 1062 aa24.49■■□□□ 1.51
UBE3D-204ENST00000430071 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
UBE3D-204ENST00000430071 CABLES1Q8TDN4 633 aa24.47■■□□□ 1.51
UBE3D-204ENST00000430071 TNS3Q68CZ2 1445 aa24.47■■□□□ 1.51
UBE3D-204ENST00000430071 USP21Q9UK80 565 aa24.46■■□□□ 1.51
UBE3D-204ENST00000430071 ITSN1Q15811 1721 aa24.46■■□□□ 1.51
UBE3D-204ENST00000430071 ALS2Q96Q42 1657 aa24.46■■□□□ 1.51
UBE3D-204ENST00000430071 TRPM1Q7Z4N2 1603 aa24.45■■□□□ 1.51
UBE3D-204ENST00000430071 PSME1Q06323 249 aa24.45■■□□□ 1.5
UBE3D-204ENST00000430071 FNBP4Q8N3X1 1017 aaPredicted RBP24.45■■□□□ 1.5
UBE3D-204ENST00000430071 RGS12O14924 1447 aa24.44■■□□□ 1.5
UBE3D-204ENST00000430071 ATP7BP35670 1465 aa24.44■■□□□ 1.5
UBE3D-204ENST00000430071 BCL9LQ86UU0 1499 aa24.43■■□□□ 1.5
UBE3D-204ENST00000430071 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
UBE3D-204ENST00000430071 RBM6P78332 1123 aaKnown RBP24.42■■□□□ 1.5
UBE3D-204ENST00000430071 LMOD2Q6P5Q4 547 aa24.42■■□□□ 1.5
UBE3D-204ENST00000430071 CDK12Q9NYV4 1490 aaPredicted RBP24.42■■□□□ 1.5
UBE3D-204ENST00000430071 TOPAZ1Q8N9V7 1692 aa24.42■■□□□ 1.5
UBE3D-204ENST00000430071 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
UBE3D-204ENST00000430071 CDK19Q9BWU1 502 aa24.42■■□□□ 1.5
UBE3D-204ENST00000430071 ATRNO75882 1429 aa24.41■■□□□ 1.5
UBE3D-204ENST00000430071 NUDT16Q96DE0 195 aaKnown RBP24.41■■□□□ 1.5
UBE3D-204ENST00000430071 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.4■■□□□ 1.5
UBE3D-204ENST00000430071 CRYBG1Q9Y4K1 1723 aa24.4■■□□□ 1.5
UBE3D-204ENST00000430071 PLCH1Q4KWH8 1693 aa24.39■■□□□ 1.5
UBE3D-204ENST00000430071 EIF3AQ14152 1382 aaKnown RBP24.38■■□□□ 1.49
UBE3D-204ENST00000430071 UPF1Q92900 1129 aaKnown RBP eCLIP24.37■■□□□ 1.49
UBE3D-204ENST00000430071 TRPC5Q9UL62 973 aaPredicted RBP24.37■■□□□ 1.49
UBE3D-204ENST00000430071 NBPF8Q3BBV2 869 aa24.36■■□□□ 1.49
UBE3D-204ENST00000430071 NGDNQ8NEJ9 315 aaKnown RBP24.36■■□□□ 1.49
UBE3D-204ENST00000430071 SLIT2O94813 1529 aa24.36■■□□□ 1.49
UBE3D-204ENST00000430071 ARHGEF10O15013 1369 aa24.34■■□□□ 1.49
UBE3D-204ENST00000430071 GPRASP1Q5JY77 1395 aa24.34■■□□□ 1.49
UBE3D-204ENST00000430071 CENPJQ9HC77 1338 aaPredicted RBP24.33■■□□□ 1.49
UBE3D-204ENST00000430071 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.49
UBE3D-204ENST00000430071 GLI3P10071 1580 aa24.33■■□□□ 1.49
UBE3D-204ENST00000430071 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
UBE3D-204ENST00000430071 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms