RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
RBM39-212ENST00000429968 ZFYVE9O95405 1425 aa18.55■□□□□ 0.56
RBM39-212ENST00000429968 ZNF521Q96K83 1311 aa18.54■□□□□ 0.56
RBM39-212ENST00000429968 USP32Q8NFA0 1604 aa18.53■□□□□ 0.56
RBM39-212ENST00000429968 PLIN1O60240 522 aa18.53■□□□□ 0.56
RBM39-212ENST00000429968 STK26Q9P289 416 aa18.53■□□□□ 0.56
RBM39-212ENST00000429968 PTPRMP28827 1452 aa18.53■□□□□ 0.56
RBM39-212ENST00000429968 CCDC136Q96JN2 1154 aa18.52■□□□□ 0.56
RBM39-212ENST00000429968 AGLP35573 1532 aa18.52■□□□□ 0.56
RBM39-212ENST00000429968 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.55
RBM39-212ENST00000429968 CABP2Q9NPB3 220 aa18.52■□□□□ 0.55
RBM39-212ENST00000429968 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
RBM39-212ENST00000429968 MLECQ14165 292 aa18.5■□□□□ 0.55
RBM39-212ENST00000429968 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
RBM39-212ENST00000429968 DUSP27Q5VZP5 1158 aa18.49■□□□□ 0.55
RBM39-212ENST00000429968 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
RBM39-212ENST00000429968 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
RBM39-212ENST00000429968 APAF1O14727 1248 aa18.48■□□□□ 0.55
RBM39-212ENST00000429968 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
RBM39-212ENST00000429968 SPATA31D1Q6ZQQ2 1576 aa18.48■□□□□ 0.55
RBM39-212ENST00000429968 ARHGEF40Q8TER5 1519 aa18.48■□□□□ 0.55
RBM39-212ENST00000429968 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
RBM39-212ENST00000429968 HOMEZQ8IX15 550 aa18.46■□□□□ 0.55
RBM39-212ENST00000429968 YTHDC2Q9H6S0 1430 aaKnown RBP18.46■□□□□ 0.55
RBM39-212ENST00000429968 POLR3AO14802 1390 aaPredicted RBP18.46■□□□□ 0.55
RBM39-212ENST00000429968 C20orf194Q5TEA3 1177 aa18.46■□□□□ 0.55
RBM39-212ENST00000429968 MORC1Q86VD1 984 aa18.46■□□□□ 0.55
RBM39-212ENST00000429968 A2ML1A8K2U0 1454 aa18.45■□□□□ 0.54
RBM39-212ENST00000429968 MSH5O43196 834 aa18.44■□□□□ 0.54
RBM39-212ENST00000429968 ANKRD36BQ8N2N9 1353 aa18.44■□□□□ 0.54
RBM39-212ENST00000429968 MINK1Q8N4C8 1332 aaPredicted RBP18.44■□□□□ 0.54
RBM39-212ENST00000429968 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
RBM39-212ENST00000429968 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
RBM39-212ENST00000429968 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
RBM39-212ENST00000429968 CD163L1Q9NR16 1453 aa18.42■□□□□ 0.54
RBM39-212ENST00000429968 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
RBM39-212ENST00000429968 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
RBM39-212ENST00000429968 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
RBM39-212ENST00000429968 TULP1O00294 542 aaPredicted RBP18.41■□□□□ 0.54
RBM39-212ENST00000429968 PLEKHG5O94827 1062 aa18.4■□□□□ 0.54
RBM39-212ENST00000429968 TRMT2AQ8IZ69 625 aaKnown RBP18.4■□□□□ 0.54
RBM39-212ENST00000429968 CGNL1Q0VF96 1302 aa18.4■□□□□ 0.54
RBM39-212ENST00000429968 MTHFSP49914 203 aa18.4■□□□□ 0.54
RBM39-212ENST00000429968 SRPK2P78362 688 aaKnown RBP18.4■□□□□ 0.54
RBM39-212ENST00000429968 PUS7Q96PZ0 661 aaKnown RBP18.4■□□□□ 0.54
RBM39-212ENST00000429968 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
RBM39-212ENST00000429968 ANKRD26Q9UPS8 1709 aa18.38■□□□□ 0.53
RBM39-212ENST00000429968 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
RBM39-212ENST00000429968 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
RBM39-212ENST00000429968 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
RBM39-212ENST00000429968 NLRP1Q9C000 1473 aa18.36■□□□□ 0.53
RBM39-212ENST00000429968 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
RBM39-212ENST00000429968 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 WAPLQ7Z5K2 1190 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 SKAP1Q86WV1 359 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 POGKQ9P215 609 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 PPP6R1Q9UPN7 881 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
RBM39-212ENST00000429968 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
RBM39-212ENST00000429968 KIF20BQ96Q89 1820 aa18.33■□□□□ 0.53
RBM39-212ENST00000429968 ZMYM3Q14202 1370 aa18.33■□□□□ 0.53
RBM39-212ENST00000429968 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
RBM39-212ENST00000429968 WWC1Q8IX03 1113 aa18.32■□□□□ 0.52
RBM39-212ENST00000429968 CDK19Q9BWU1 502 aa18.32■□□□□ 0.52
RBM39-212ENST00000429968 NSD2O96028 1365 aa18.32■□□□□ 0.52
RBM39-212ENST00000429968 BCAR3O75815 825 aa18.31■□□□□ 0.52
RBM39-212ENST00000429968 KCNA4P22459 653 aa18.31■□□□□ 0.52
RBM39-212ENST00000429968 ATAD2Q6PL18 1390 aa18.31■□□□□ 0.52
RBM39-212ENST00000429968 COL3A1P02461 1466 aaPredicted RBP18.31■□□□□ 0.52
RBM39-212ENST00000429968 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
RBM39-212ENST00000429968 METP08581 1390 aa18.3■□□□□ 0.52
RBM39-212ENST00000429968 FYB1O15117 783 aa18.3■□□□□ 0.52
RBM39-212ENST00000429968 TCP11L2Q8N4U5 519 aa18.3■□□□□ 0.52
RBM39-212ENST00000429968 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
RBM39-212ENST00000429968 UBR1Q8IWV7 1749 aa18.29■□□□□ 0.52
RBM39-212ENST00000429968 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
RBM39-212ENST00000429968 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
RBM39-212ENST00000429968 ADGRB2O60241 1585 aa18.28■□□□□ 0.52
RBM39-212ENST00000429968 E9PSI1 815 aa18.28■□□□□ 0.52
RBM39-212ENST00000429968 ANP32EQ9BTT0 268 aa18.28■□□□□ 0.52
RBM39-212ENST00000429968 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
RBM39-212ENST00000429968 FBLN1P23142 703 aa18.26■□□□□ 0.51
RBM39-212ENST00000429968 TERF2IPQ9NYB0 399 aa18.25■□□□□ 0.51
RBM39-212ENST00000429968 KNDC1Q76NI1 1749 aa18.24■□□□□ 0.51
RBM39-212ENST00000429968 MED14O60244 1454 aa18.24■□□□□ 0.51
RBM39-212ENST00000429968 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
RBM39-212ENST00000429968 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.518e-22■□□□□ 9.7
RBM39-212ENST00000429968 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
RBM39-212ENST00000429968 NCKAP5LQ9HCH0 1330 aa18.23■□□□□ 0.51
RBM39-212ENST00000429968 MAP2P11137 1827 aaKnown RBP18.23■□□□□ 0.51
RBM39-212ENST00000429968 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
RBM39-212ENST00000429968 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
RBM39-212ENST00000429968 TNRQ92752 1358 aa18.23■□□□□ 0.51
RBM39-212ENST00000429968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.21■□□□□ 0.51
RBM39-212ENST00000429968 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
RBM39-212ENST00000429968 ESF1Q9H501 851 aaKnown RBP18.21■□□□□ 0.51
RBM39-212ENST00000429968 PLEKHF1Q96S99 279 aa18.2■□□□□ 0.5
RBM39-212ENST00000429968 ATP7BP35670 1465 aa18.19■□□□□ 0.5
RBM39-212ENST00000429968 HDGFL2Q7Z4V5 671 aaPredicted RBP18.19■□□□□ 0.5
RBM39-212ENST00000429968 TAOK2Q9UL54 1235 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms