RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RXRBP28702 533 aa22.17■■□□□ 1.14
MSH5-208ENST00000429846 LRPPRCP42704 1394 aaKnown RBP22.16■■□□□ 1.14
MSH5-208ENST00000429846 RGL3Q3MIN7 710 aa22.16■■□□□ 1.14
MSH5-208ENST00000429846 ORAI2Q96SN7 254 aa22.16■■□□□ 1.14
MSH5-208ENST00000429846 COL22A1Q8NFW1 1626 aaPredicted RBP22.16■■□□□ 1.14
MSH5-208ENST00000429846 ABCC11Q96J66 1382 aa22.14■■□□□ 1.14
MSH5-208ENST00000429846 C8orf37Q96NL8 207 aa22.13■■□□□ 1.13
MSH5-208ENST00000429846 NPHP3Q7Z494 1330 aa22.12■■□□□ 1.13
MSH5-208ENST00000429846 MYOM2P54296 1465 aa22.11■■□□□ 1.13
MSH5-208ENST00000429846 NRXN1Q9ULB1 1477 aa22.1■■□□□ 1.13
MSH5-208ENST00000429846 PXDNQ92626 1479 aa22.09■■□□□ 1.13
MSH5-208ENST00000429846 FMN2Q9NZ56 1722 aa22.09■■□□□ 1.13
MSH5-208ENST00000429846 YTHDC2Q9H6S0 1430 aaKnown RBP22.09■■□□□ 1.13
MSH5-208ENST00000429846 KIF1AQ12756 1690 aa22.08■■□□□ 1.13
MSH5-208ENST00000429846 ESCO1Q5FWF5 840 aa22.08■■□□□ 1.13
MSH5-208ENST00000429846 STK26Q9P289 416 aa22.08■■□□□ 1.13
MSH5-208ENST00000429846 RBM6P78332 1123 aaKnown RBP22.07■■□□□ 1.12
MSH5-208ENST00000429846 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
MSH5-208ENST00000429846 UPF1Q92900 1129 aaKnown RBP eCLIP22.06■■□□□ 1.12
MSH5-208ENST00000429846 NGLY1Q96IV0 654 aa22.06■■□□□ 1.12
MSH5-208ENST00000429846 QTRT2Q9H974 415 aaKnown RBP22.06■■□□□ 1.12
MSH5-208ENST00000429846 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
MSH5-208ENST00000429846 RGS12O14924 1447 aa22.06■■□□□ 1.12
MSH5-208ENST00000429846 ADAMTS2O95450 1211 aa22.05■■□□□ 1.12
MSH5-208ENST00000429846 TMEM132EQ6IEE7 984 aa22.05■■□□□ 1.12
MSH5-208ENST00000429846 RAB3GAP2Q9H2M9 1393 aa22.04■■□□□ 1.12
MSH5-208ENST00000429846 PLEKHH1Q9ULM0 1364 aa22.04■■□□□ 1.12
MSH5-208ENST00000429846 SIRT1Q96EB6 747 aa22.04■■□□□ 1.12
MSH5-208ENST00000429846 C14orf93Q9H972 538 aaKnown RBP22.03■■□□□ 1.12
MSH5-208ENST00000429846 DHX57Q6P158 1386 aaKnown RBP22.02■■□□□ 1.12
MSH5-208ENST00000429846 FOXO3O43524 673 aa22.01■■□□□ 1.11
MSH5-208ENST00000429846 FNBP4Q8N3X1 1017 aaPredicted RBP22■■□□□ 1.11
MSH5-208ENST00000429846 USP21Q9UK80 565 aa22■■□□□ 1.11
MSH5-208ENST00000429846 DLC1Q96QB1 1528 aa22■■□□□ 1.11
MSH5-208ENST00000429846 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
MSH5-208ENST00000429846 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
MSH5-208ENST00000429846 CFAP70Q5T0N1 1121 aa21.97■■□□□ 1.11
MSH5-208ENST00000429846 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
MSH5-208ENST00000429846 RGPD8O14715 1765 aaPredicted RBP21.97■■□□□ 1.11
MSH5-208ENST00000429846 ATRNO75882 1429 aa21.97■■□□□ 1.11
MSH5-208ENST00000429846 XPCQ01831 940 aaPredicted RBP21.96■■□□□ 1.11
MSH5-208ENST00000429846 ADGRB2O60241 1585 aa21.95■■□□□ 1.11
MSH5-208ENST00000429846 ADGRB1O14514 1584 aa21.95■■□□□ 1.1
MSH5-208ENST00000429846 SPATA31A3Q5VYP0 1347 aa21.93■■□□□ 1.1
MSH5-208ENST00000429846 USP32Q8NFA0 1604 aa21.92■■□□□ 1.1
MSH5-208ENST00000429846 BCL9LQ86UU0 1499 aa21.92■■□□□ 1.1
MSH5-208ENST00000429846 TNS3Q68CZ2 1445 aa21.91■■□□□ 1.1
MSH5-208ENST00000429846 ANKARQ7Z5J8 1434 aa21.91■■□□□ 1.1
MSH5-208ENST00000429846 ATAD2Q6PL18 1390 aa21.91■■□□□ 1.1
MSH5-208ENST00000429846 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
MSH5-208ENST00000429846 HRCP23327 699 aa21.9■■□□□ 1.1
MSH5-208ENST00000429846 STAC3Q96MF2 364 aa21.9■■□□□ 1.1
MSH5-208ENST00000429846 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
MSH5-208ENST00000429846 PSME1Q06323 249 aa21.88■■□□□ 1.09
MSH5-208ENST00000429846 KRT28Q7Z3Y7 464 aa21.88■■□□□ 1.09
MSH5-208ENST00000429846 POGKQ9P215 609 aa21.88■■□□□ 1.09
MSH5-208ENST00000429846 SBNO1A3KN83 1393 aa21.87■■□□□ 1.09
MSH5-208ENST00000429846 SLIT2O94813 1529 aa21.87■■□□□ 1.09
MSH5-208ENST00000429846 ABCA3Q99758 1704 aa21.87■■□□□ 1.09
MSH5-208ENST00000429846 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
MSH5-208ENST00000429846 SAFB2Q14151 953 aaKnown RBP eCLIP21.86■■□□□ 1.09
MSH5-208ENST00000429846 ARHGEF10O15013 1369 aa21.86■■□□□ 1.09
MSH5-208ENST00000429846 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
MSH5-208ENST00000429846 DCAF11Q8TEB1 546 aa21.83■■□□□ 1.09
MSH5-208ENST00000429846 GJD4Q96KN9 370 aaPredicted RBP21.83■■□□□ 1.09
MSH5-208ENST00000429846 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.09
MSH5-208ENST00000429846 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
MSH5-208ENST00000429846 UNC5CLQ8IV45 518 aa21.82■■□□□ 1.08
MSH5-208ENST00000429846 ARHGEF28Q8N1W1 1705 aaKnown RBP21.81■■□□□ 1.08
MSH5-208ENST00000429846 TRPM3Q9HCF6 1732 aaPredicted RBP21.81■■□□□ 1.08
MSH5-208ENST00000429846 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
MSH5-208ENST00000429846 TRAK1Q9UPV9 953 aa21.81■■□□□ 1.08
MSH5-208ENST00000429846 GLI3P10071 1580 aa21.81■■□□□ 1.08
MSH5-208ENST00000429846 RALGAPBQ86X10 1494 aa21.8■■□□□ 1.08
MSH5-208ENST00000429846 KDM2AQ9Y2K7 1162 aa21.8■■□□□ 1.08
MSH5-208ENST00000429846 ALS2Q96Q42 1657 aa21.79■■□□□ 1.08
MSH5-208ENST00000429846 ITSN1Q15811 1721 aa21.78■■□□□ 1.08
MSH5-208ENST00000429846 GPRASP1Q5JY77 1395 aa21.76■■□□□ 1.07
MSH5-208ENST00000429846 PMFBP1Q8TBY8 1022 aa21.76■■□□□ 1.07
MSH5-208ENST00000429846 HIRIP3Q9BW71 556 aaPredicted RBP21.76■■□□□ 1.07
MSH5-208ENST00000429846 KIAA1210Q9ULL0 1709 aa21.76■■□□□ 1.07
MSH5-208ENST00000429846 MINK1Q8N4C8 1332 aaPredicted RBP21.76■■□□□ 1.07
MSH5-208ENST00000429846 WASLO00401 505 aaPredicted RBP21.75■■□□□ 1.07
MSH5-208ENST00000429846 LMOD2Q6P5Q4 547 aa21.75■■□□□ 1.07
MSH5-208ENST00000429846 CCDC125Q86Z20 511 aa21.75■■□□□ 1.07
MSH5-208ENST00000429846 CABLES1Q8TDN4 633 aa21.73■■□□□ 1.07
MSH5-208ENST00000429846 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
MSH5-208ENST00000429846 BRWD3Q6RI45 1802 aa21.72■■□□□ 1.07
MSH5-208ENST00000429846 VPS72Q15906 364 aa21.72■■□□□ 1.07
MSH5-208ENST00000429846 CRYBG1Q9Y4K1 1723 aa21.72■■□□□ 1.07
MSH5-208ENST00000429846 EP400Q96L91 3159 aa21.71■■□□□ 1.07
MSH5-208ENST00000429846 NRAPQ86VF7 1730 aa21.71■■□□□ 1.07
MSH5-208ENST00000429846 COL14A1Q05707 1796 aaKnown RBP21.71■■□□□ 1.07
MSH5-208ENST00000429846 ATP7BP35670 1465 aa21.71■■□□□ 1.07
MSH5-208ENST00000429846 TOPAZ1Q8N9V7 1692 aa21.68■■□□□ 1.06
MSH5-208ENST00000429846 BLMP54132 1417 aaPredicted RBP21.67■■□□□ 1.06
MSH5-208ENST00000429846 NGDNQ8NEJ9 315 aaKnown RBP21.67■■□□□ 1.06
MSH5-208ENST00000429846 PLEKHG5O94827 1062 aa21.66■■□□□ 1.06
MSH5-208ENST00000429846 FAM83GA6ND36 823 aa21.65■■□□□ 1.06
MSH5-208ENST00000429846 ONECUT3O60422 494 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms