RNA–Protein interactions for RNA: ENST00000429246.5

ARPC1B-206, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 348 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-206ENST00000429246 SIRT1Q96EB6 747 aa28.85■■■□□ 2.21
ARPC1B-206ENST00000429246 STK26Q9P289 416 aa28.83■■■□□ 2.21
ARPC1B-206ENST00000429246 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
ARPC1B-206ENST00000429246 POTEAQ6S8J7 498 aa28.82■■■□□ 2.2
ARPC1B-206ENST00000429246 C19orf44Q9H6X5 657 aa28.82■■■□□ 2.2
ARPC1B-206ENST00000429246 COL16A1Q07092 1604 aaPredicted RBP28.81■■■□□ 2.2
ARPC1B-206ENST00000429246 C14orf37Q86TY3 774 aa28.81■■■□□ 2.2
ARPC1B-206ENST00000429246 TIMELESSQ9UNS1 1208 aa28.81■■■□□ 2.2
ARPC1B-206ENST00000429246 ADGRB2O60241 1585 aa28.78■■■□□ 2.2
ARPC1B-206ENST00000429246 RALGAPBQ86X10 1494 aa28.78■■■□□ 2.2
ARPC1B-206ENST00000429246 CADPS2Q86UW7 1296 aa28.76■■■□□ 2.19
ARPC1B-206ENST00000429246 PLEKHH1Q9ULM0 1364 aa28.75■■■□□ 2.19
ARPC1B-206ENST00000429246 FMN2Q9NZ56 1722 aa28.75■■■□□ 2.19
ARPC1B-206ENST00000429246 NBPF1Q3BBV0 1214 aa28.74■■■□□ 2.19
ARPC1B-206ENST00000429246 NBPF8Q3BBV2 869 aa28.74■■■□□ 2.19
ARPC1B-206ENST00000429246 SLAIN2Q9P270 581 aa28.74■■■□□ 2.19
ARPC1B-206ENST00000429246 GPRASP1Q5JY77 1395 aa28.74■■■□□ 2.19
ARPC1B-206ENST00000429246 JCADQ9P266 1359 aa28.74■■■□□ 2.19
ARPC1B-206ENST00000429246 WAPLQ7Z5K2 1190 aa28.73■■■□□ 2.19
ARPC1B-206ENST00000429246 ATF3P18847 181 aa28.72■■■□□ 2.19
ARPC1B-206ENST00000429246 TRAK1Q9UPV9 953 aa28.72■■■□□ 2.19
ARPC1B-206ENST00000429246 ROCK2O75116 1388 aaKnown RBP28.72■■■□□ 2.19
ARPC1B-206ENST00000429246 SHPRHQ149N8 1683 aa28.71■■■□□ 2.19
ARPC1B-206ENST00000429246 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
ARPC1B-206ENST00000429246 MST1RQ04912 1400 aa28.7■■■□□ 2.19
ARPC1B-206ENST00000429246 PRAM1Q96QH2 718 aa28.7■■■□□ 2.18
ARPC1B-206ENST00000429246 AHDC1Q5TGY3 1603 aaPredicted RBP28.68■■■□□ 2.18
ARPC1B-206ENST00000429246 POGKQ9P215 609 aa28.66■■■□□ 2.18
ARPC1B-206ENST00000429246 LRP6O75581 1613 aa28.65■■■□□ 2.18
ARPC1B-206ENST00000429246 RGPD8O14715 1765 aaPredicted RBP28.65■■■□□ 2.18
ARPC1B-206ENST00000429246 NHSL1Q5SYE7 1610 aa28.62■■■□□ 2.17
ARPC1B-206ENST00000429246 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
ARPC1B-206ENST00000429246 EIF3AQ14152 1382 aaKnown RBP28.6■■■□□ 2.17
ARPC1B-206ENST00000429246 USP32Q8NFA0 1604 aa28.59■■■□□ 2.17
ARPC1B-206ENST00000429246 KIF1AQ12756 1690 aa28.58■■■□□ 2.17
ARPC1B-206ENST00000429246 ITSN1Q15811 1721 aa28.58■■■□□ 2.17
ARPC1B-206ENST00000429246 SAFB2Q14151 953 aaKnown RBP eCLIP28.58■■■□□ 2.17
ARPC1B-206ENST00000429246 SPATA31A6Q5VVP1 1343 aa28.57■■■□□ 2.16
ARPC1B-206ENST00000429246 CENPJQ9HC77 1338 aaPredicted RBP28.56■■■□□ 2.16
ARPC1B-206ENST00000429246 TULP4Q9NRJ4 1543 aa28.55■■■□□ 2.16
ARPC1B-206ENST00000429246 CARD11Q9BXL7 1154 aa28.55■■■□□ 2.16
ARPC1B-206ENST00000429246 ANKARQ7Z5J8 1434 aa28.54■■■□□ 2.16
ARPC1B-206ENST00000429246 MEX3CQ5U5Q3 659 aaKnown RBP28.54■■■□□ 2.16
ARPC1B-206ENST00000429246 MINK1Q8N4C8 1332 aaPredicted RBP28.53■■■□□ 2.16
ARPC1B-206ENST00000429246 BRINP3Q76B58 766 aa28.53■■■□□ 2.16
ARPC1B-206ENST00000429246 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.16
ARPC1B-206ENST00000429246 SBNO2Q9Y2G9 1366 aa28.5■■■□□ 2.15
ARPC1B-206ENST00000429246 WASLO00401 505 aaPredicted RBP28.48■■■□□ 2.15
ARPC1B-206ENST00000429246 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
ARPC1B-206ENST00000429246 ZNF772Q68DY9 489 aaPredicted RBP28.47■■■□□ 2.15
ARPC1B-206ENST00000429246 ATP7BP35670 1465 aa28.45■■■□□ 2.14
ARPC1B-206ENST00000429246 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
ARPC1B-206ENST00000429246 NUTM2FA1L443 756 aa28.4■■■□□ 2.14
ARPC1B-206ENST00000429246 ESCO1Q5FWF5 840 aa28.4■■■□□ 2.14
ARPC1B-206ENST00000429246 USP47Q96K76 1375 aa28.39■■■□□ 2.14
ARPC1B-206ENST00000429246 PRR36Q9H6K5 1346 aa28.39■■■□□ 2.13
ARPC1B-206ENST00000429246 NUTM2BA6NNL0 878 aaPredicted RBP28.38■■■□□ 2.13
ARPC1B-206ENST00000429246 NUTM2EB1AL46 878 aaPredicted RBP28.38■■■□□ 2.13
ARPC1B-206ENST00000429246 NUTM2AQ8IVF1 878 aaPredicted RBP28.38■■■□□ 2.13
ARPC1B-206ENST00000429246 CDK19Q9BWU1 502 aa28.38■■■□□ 2.13
ARPC1B-206ENST00000429246 UPF1Q92900 1129 aaKnown RBP eCLIP28.37■■■□□ 2.13
ARPC1B-206ENST00000429246 EVC2Q86UK5 1308 aa28.37■■■□□ 2.13
ARPC1B-206ENST00000429246 PXDNQ92626 1479 aa28.36■■■□□ 2.13
ARPC1B-206ENST00000429246 CDK12Q9NYV4 1490 aaPredicted RBP28.35■■■□□ 2.13
ARPC1B-206ENST00000429246 NPHP3Q7Z494 1330 aa28.35■■■□□ 2.13
ARPC1B-206ENST00000429246 PHF8Q9UPP1 1060 aa28.34■■■□□ 2.13
ARPC1B-206ENST00000429246 RXRBP28702 533 aa28.33■■■□□ 2.13
ARPC1B-206ENST00000429246 SOS2Q07890 1332 aaPredicted RBP28.33■■■□□ 2.13
ARPC1B-206ENST00000429246 TRPM3Q9HCF6 1732 aaPredicted RBP28.32■■■□□ 2.12
ARPC1B-206ENST00000429246 NUDT16Q96DE0 195 aaKnown RBP28.32■■■□□ 2.12
ARPC1B-206ENST00000429246 AFF2P51816 1311 aa28.31■■■□□ 2.12
ARPC1B-206ENST00000429246 ST20-MTHFSA0A0A6YYL1 179 aa28.3■■■□□ 2.12
ARPC1B-206ENST00000429246 SLC24A1O60721 1099 aa28.3■■■□□ 2.12
ARPC1B-206ENST00000429246 SRPK2P78362 688 aaKnown RBP28.3■■■□□ 2.12
ARPC1B-206ENST00000429246 COL22A1Q8NFW1 1626 aaPredicted RBP28.29■■■□□ 2.12
ARPC1B-206ENST00000429246 DDX17Q92841 729 aaKnown RBP28.29■■■□□ 2.12
ARPC1B-206ENST00000429246 TESK2Q96S53 571 aa28.29■■■□□ 2.12
ARPC1B-206ENST00000429246 AKAP12Q02952 1782 aa28.29■■■□□ 2.12
ARPC1B-206ENST00000429246 FOXO3O43524 673 aa28.28■■■□□ 2.12
ARPC1B-206ENST00000429246 CCDC61Q9Y6R9 512 aa28.28■■■□□ 2.12
ARPC1B-206ENST00000429246 ATAD2Q6PL18 1390 aa28.26■■■□□ 2.12
ARPC1B-206ENST00000429246 LRRC59Q96AG4 307 aaKnown RBP28.26■■■□□ 2.11
ARPC1B-206ENST00000429246 CABP2Q9NPB3 220 aa28.26■■■□□ 2.11
ARPC1B-206ENST00000429246 PPIP5K1Q6PFW1 1433 aa28.26■■■□□ 2.11
ARPC1B-206ENST00000429246 ALS2Q96Q42 1657 aa28.26■■■□□ 2.11
ARPC1B-206ENST00000429246 POLR3AO14802 1390 aaPredicted RBP28.25■■■□□ 2.11
ARPC1B-206ENST00000429246 PNPLA6Q8IY17 1366 aa28.25■■■□□ 2.11
ARPC1B-206ENST00000429246 PLEKHG3A1L390 1219 aa28.23■■■□□ 2.11
ARPC1B-206ENST00000429246 PMFBP1Q8TBY8 1022 aa28.23■■■□□ 2.11
ARPC1B-206ENST00000429246 PUS7Q96PZ0 661 aaKnown RBP28.23■■■□□ 2.11
ARPC1B-206ENST00000429246 RGS12O14924 1447 aa28.23■■■□□ 2.11
ARPC1B-206ENST00000429246 C8orf37Q96NL8 207 aa28.21■■■□□ 2.11
ARPC1B-206ENST00000429246 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
ARPC1B-206ENST00000429246 MON2Q7Z3U7 1717 aa28.21■■■□□ 2.11
ARPC1B-206ENST00000429246 EIF4G2P78344 907 aaKnown RBP eCLIP28.19■■■□□ 2.17e-8■■■■■ 27.1
ARPC1B-206ENST00000429246 KRT28Q7Z3Y7 464 aa28.19■■■□□ 2.1
ARPC1B-206ENST00000429246 TNS3Q68CZ2 1445 aa28.18■■■□□ 2.1
ARPC1B-206ENST00000429246 PSME1Q06323 249 aa28.18■■■□□ 2.1
ARPC1B-206ENST00000429246 NGDNQ8NEJ9 315 aaKnown RBP28.18■■■□□ 2.1
ARPC1B-206ENST00000429246 ABCA3Q99758 1704 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms