RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 RNF123Q5XPI4 1314 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 NRXN3Q9Y4C0 1643 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 PRAM1Q96QH2 718 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 SENP3Q9H4L4 574 aaPredicted RBP26.37■■□□□ 1.81
CASC4-203ENST00000429162 POGKQ9P215 609 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 ADAMTS8Q9UP79 889 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 ATAD2Q6PL18 1390 aa26.37■■□□□ 1.81
CASC4-203ENST00000429162 SAFB2Q14151 953 aaKnown RBP eCLIP26.36■■□□□ 1.81
CASC4-203ENST00000429162 NSD2O96028 1365 aa26.36■■□□□ 1.81
CASC4-203ENST00000429162 CGNL1Q0VF96 1302 aa26.35■■□□□ 1.81
CASC4-203ENST00000429162 UBR1Q8IWV7 1749 aa26.35■■□□□ 1.81
CASC4-203ENST00000429162 CABP2Q9NPB3 220 aa26.34■■□□□ 1.81
CASC4-203ENST00000429162 PPP4R2Q9NY27 417 aa26.33■■□□□ 1.81
CASC4-203ENST00000429162 SRPK2P78362 688 aaKnown RBP26.32■■□□□ 1.8
CASC4-203ENST00000429162 MORC1Q86VD1 984 aa26.32■■□□□ 1.8
CASC4-203ENST00000429162 SALL2Q9Y467 1007 aaPredicted RBP26.32■■□□□ 1.8
CASC4-203ENST00000429162 POLR3AO14802 1390 aaPredicted RBP26.32■■□□□ 1.8
CASC4-203ENST00000429162 HDGFP51858 240 aaKnown RBP26.31■■□□□ 1.8
CASC4-203ENST00000429162 MINK1Q8N4C8 1332 aaPredicted RBP26.31■■□□□ 1.8
CASC4-203ENST00000429162 TRHP20396 242 aaPredicted RBP26.3■■□□□ 1.8
CASC4-203ENST00000429162 KNDC1Q76NI1 1749 aa26.29■■□□□ 1.8
CASC4-203ENST00000429162 ABCC11Q96J66 1382 aa26.29■■□□□ 1.8
CASC4-203ENST00000429162 NLRP1Q9C000 1473 aa26.28■■□□□ 1.8
CASC4-203ENST00000429162 A0A1W2PP64 1363 aa26.27■■□□□ 1.8
CASC4-203ENST00000429162 TMEM2Q9UHN6 1383 aa26.26■■□□□ 1.79
CASC4-203ENST00000429162 FER1L4A9Z1Z3 1794 aa26.24■■□□□ 1.79
CASC4-203ENST00000429162 SHPRHQ149N8 1683 aa26.24■■□□□ 1.79
CASC4-203ENST00000429162 TERF2IPQ9NYB0 399 aa26.24■■□□□ 1.79
CASC4-203ENST00000429162 C3P01024 1663 aa26.23■■□□□ 1.79
CASC4-203ENST00000429162 ANKRD26Q9UPS8 1709 aa26.23■■□□□ 1.79
CASC4-203ENST00000429162 RCAN3Q9UKA8 241 aa26.22■■□□□ 1.79
CASC4-203ENST00000429162 TECPR2O15040 1411 aa26.21■■□□□ 1.79
CASC4-203ENST00000429162 CD163L1Q9NR16 1453 aa26.21■■□□□ 1.79
CASC4-203ENST00000429162 CPS1P31327 1500 aa26.21■■□□□ 1.79
CASC4-203ENST00000429162 CDK19Q9BWU1 502 aa26.21■■□□□ 1.79
CASC4-203ENST00000429162 METP08581 1390 aa26.2■■□□□ 1.78
CASC4-203ENST00000429162 PLEKHH1Q9ULM0 1364 aa26.2■■□□□ 1.78
CASC4-203ENST00000429162 CDCA7LQ96GN5 454 aa26.2■■□□□ 1.78
CASC4-203ENST00000429162 MED14O60244 1454 aa26.19■■□□□ 1.78
CASC4-203ENST00000429162 FAM135BQ49AJ0 1406 aa26.19■■□□□ 1.78
CASC4-203ENST00000429162 ZNF521Q96K83 1311 aa26.18■■□□□ 1.78
CASC4-203ENST00000429162 TSHZ2Q9NRE2 1034 aa26.18■■□□□ 1.78
CASC4-203ENST00000429162 ATP7BP35670 1465 aa26.17■■□□□ 1.78
CASC4-203ENST00000429162 RRP1P56182 461 aaKnown RBP26.17■■□□□ 1.78
CASC4-203ENST00000429162 HDGFL2Q7Z4V5 671 aaPredicted RBP26.17■■□□□ 1.78
CASC4-203ENST00000429162 NGEFQ8N5V2 710 aa26.17■■□□□ 1.78
CASC4-203ENST00000429162 CFAP53Q96M91 514 aa26.16■■□□□ 1.78
CASC4-203ENST00000429162 TNNT2P45379 298 aaPredicted RBP26.16■■□□□ 1.78
CASC4-203ENST00000429162 WAPLQ7Z5K2 1190 aa26.16■■□□□ 1.78
CASC4-203ENST00000429162 SIRT1Q96EB6 747 aa26.16■■□□□ 1.78
CASC4-203ENST00000429162 KIF20BQ96Q89 1820 aa26.15■■□□□ 1.78
CASC4-203ENST00000429162 PLEKHG1Q9ULL1 1385 aa26.15■■□□□ 1.78
CASC4-203ENST00000429162 CCDC146Q8IYE0 955 aa26.14■■□□□ 1.78
CASC4-203ENST00000429162 ADAMTS13Q76LX8 1427 aa26.12■■□□□ 1.77
CASC4-203ENST00000429162 GOLGA2Q08379 1002 aa26.12■■□□□ 1.77
CASC4-203ENST00000429162 SLIT1O75093 1534 aa26.11■■□□□ 1.77
CASC4-203ENST00000429162 MTHFSP49914 203 aa26.11■■□□□ 1.77
CASC4-203ENST00000429162 ARHGAP23Q9P227 1491 aa26.09■■□□□ 1.77
CASC4-203ENST00000429162 APAF1O14727 1248 aa26.09■■□□□ 1.77
CASC4-203ENST00000429162 CEBPAP49715 358 aaPredicted RBP26.09■■□□□ 1.77
CASC4-203ENST00000429162 CABP1Q9NZU7 370 aa26.09■■□□□ 1.77
CASC4-203ENST00000429162 B4GALNT3Q6L9W6 998 aa26.08■■□□□ 1.77
CASC4-203ENST00000429162 WASLO00401 505 aaPredicted RBP26.08■■□□□ 1.76
CASC4-203ENST00000429162 TXNDC2Q86VQ3 553 aa26.07■■□□□ 1.76
CASC4-203ENST00000429162 ADGRB2O60241 1585 aa26.06■■□□□ 1.76
CASC4-203ENST00000429162 GGNBP2Q9H3C7 697 aa26.06■■□□□ 1.76
CASC4-203ENST00000429162 IQSEC2Q5JU85 1478 aa26.06■■□□□ 1.76
CASC4-203ENST00000429162 FYB1O15117 783 aa26.05■■□□□ 1.76
CASC4-203ENST00000429162 DUSP27Q5VZP5 1158 aa26.05■■□□□ 1.76
CASC4-203ENST00000429162 EID1Q9Y6B2 187 aa26.05■■□□□ 1.76
CASC4-203ENST00000429162 RUNDC1Q96C34 613 aa26.04■■□□□ 1.76
CASC4-203ENST00000429162 PPIP5K1Q6PFW1 1433 aa26.03■■□□□ 1.76
CASC4-203ENST00000429162 LTKP29376 864 aa26.03■■□□□ 1.76
CASC4-203ENST00000429162 SLFN5Q08AF3 891 aa26.03■■□□□ 1.76
CASC4-203ENST00000429162 CDC42BPGQ6DT37 1551 aa26.03■■□□□ 1.76
CASC4-203ENST00000429162 DIP2AQ14689 1571 aa26.02■■□□□ 1.76
CASC4-203ENST00000429162 COL3A1P02461 1466 aaPredicted RBP26.01■■□□□ 1.75
CASC4-203ENST00000429162 CPSF1Q10570 1443 aaKnown RBP26.01■■□□□ 1.75
CASC4-203ENST00000429162 EDC4Q6P2E9 1401 aaKnown RBP26■■□□□ 1.75
CASC4-203ENST00000429162 ROBO2Q9HCK4 1378 aa26■■□□□ 1.75
CASC4-203ENST00000429162 TRMT2AQ8IZ69 625 aaKnown RBP26■■□□□ 1.75
CASC4-203ENST00000429162 CCDC136Q96JN2 1154 aa26■■□□□ 1.75
CASC4-203ENST00000429162 MON2Q7Z3U7 1717 aa26■■□□□ 1.75
CASC4-203ENST00000429162 E9PSI1 815 aa25.99■■□□□ 1.75
CASC4-203ENST00000429162 ITSN1Q15811 1721 aa25.99■■□□□ 1.75
CASC4-203ENST00000429162 NKTRP30414 1462 aaKnown RBP25.98■■□□□ 1.75
CASC4-203ENST00000429162 AKAP12Q02952 1782 aa25.97■■□□□ 1.75
CASC4-203ENST00000429162 THEMISQ8N1K5 641 aaPredicted RBP25.96■■□□□ 1.75
CASC4-203ENST00000429162 NUDT16Q96DE0 195 aaKnown RBP25.96■■□□□ 1.75
CASC4-203ENST00000429162 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.95■■□□□ 1.74
CASC4-203ENST00000429162 NCBP3Q53F19 620 aaKnown RBP25.94■■□□□ 1.74
CASC4-203ENST00000429162 RIMS1Q86UR5 1692 aaKnown RBP25.94■■□□□ 1.74
CASC4-203ENST00000429162 PLPPR3Q6T4P5 718 aa25.94■■□□□ 1.74
CASC4-203ENST00000429162 CCDC61Q9Y6R9 512 aa25.94■■□□□ 1.74
CASC4-203ENST00000429162 CEP170BQ9Y4F5 1589 aaPredicted RBP25.93■■□□□ 1.74
CASC4-203ENST00000429162 TOPAZ1Q8N9V7 1692 aa25.93■■□□□ 1.74
CASC4-203ENST00000429162 U2AF1L5P0DN76 240 aaPredicted RBP25.93■■□□□ 1.74
CASC4-203ENST00000429162 U2AF1Q01081 240 aaKnown RBP eCLIP25.93■■□□□ 1.74
CASC4-203ENST00000429162 WWC1Q8IX03 1113 aa25.92■■□□□ 1.74
CASC4-203ENST00000429162 TCP11L2Q8N4U5 519 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms