RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 PPARGC1BQ86YN6 1023 aaKnown RBP19.61■□□□□ 0.73
PCCA-206ENST00000428969 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
PCCA-206ENST00000428969 NPHP3Q7Z494 1330 aa19.59■□□□□ 0.73
PCCA-206ENST00000428969 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
PCCA-206ENST00000428969 MYOM2P54296 1465 aa19.58■□□□□ 0.72
PCCA-206ENST00000428969 ATRNO75882 1429 aa19.58■□□□□ 0.72
PCCA-206ENST00000428969 SRCAPQ6ZRS2 3230 aa19.57■□□□□ 0.72
PCCA-206ENST00000428969 FOXD1Q16676 465 aa19.57■□□□□ 0.72
PCCA-206ENST00000428969 LRPPRCP42704 1394 aaKnown RBP19.56■□□□□ 0.72
PCCA-206ENST00000428969 ESCO1Q5FWF5 840 aa19.55■□□□□ 0.72
PCCA-206ENST00000428969 PXDNQ92626 1479 aa19.54■□□□□ 0.72
PCCA-206ENST00000428969 TECPR2O15040 1411 aa19.53■□□□□ 0.72
PCCA-206ENST00000428969 MARF1Q9Y4F3 1742 aaKnown RBP19.53■□□□□ 0.72
PCCA-206ENST00000428969 EP400Q96L91 3159 aa19.51■□□□□ 0.71
PCCA-206ENST00000428969 CCDC125Q86Z20 511 aa19.51■□□□□ 0.71
PCCA-206ENST00000428969 BCL9LQ86UU0 1499 aa19.51■□□□□ 0.71
PCCA-206ENST00000428969 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
PCCA-206ENST00000428969 ANKRD30BQ9BXX2 1392 aa19.5■□□□□ 0.71
PCCA-206ENST00000428969 ABCC11Q96J66 1382 aa19.49■□□□□ 0.71
PCCA-206ENST00000428969 FOXO3O43524 673 aa19.49■□□□□ 0.71
PCCA-206ENST00000428969 ADGRF5Q8IZF2 1346 aa19.49■□□□□ 0.71
PCCA-206ENST00000428969 KNDC1Q76NI1 1749 aa19.48■□□□□ 0.71
PCCA-206ENST00000428969 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.48■□□□□ 0.71
PCCA-206ENST00000428969 GJD4Q96KN9 370 aaPredicted RBP19.47■□□□□ 0.71
PCCA-206ENST00000428969 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
PCCA-206ENST00000428969 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
PCCA-206ENST00000428969 KIF1AQ12756 1690 aa19.46■□□□□ 0.71
PCCA-206ENST00000428969 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
PCCA-206ENST00000428969 PIK3C2GO75747 1445 aa19.44■□□□□ 0.7
PCCA-206ENST00000428969 XPCQ01831 940 aaPredicted RBP19.44■□□□□ 0.7
PCCA-206ENST00000428969 WAPLQ7Z5K2 1190 aa19.44■□□□□ 0.7
PCCA-206ENST00000428969 STK26Q9P289 416 aa19.44■□□□□ 0.7
PCCA-206ENST00000428969 FMN2Q9NZ56 1722 aa19.44■□□□□ 0.7
PCCA-206ENST00000428969 SLIT2O94813 1529 aa19.43■□□□□ 0.7
PCCA-206ENST00000428969 SPATA31A3Q5VYP0 1347 aa19.43■□□□□ 0.7
PCCA-206ENST00000428969 RGL3Q3MIN7 710 aa19.42■□□□□ 0.7
PCCA-206ENST00000428969 UNC5CLQ8IV45 518 aa19.42■□□□□ 0.7
PCCA-206ENST00000428969 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
PCCA-206ENST00000428969 YTHDC2Q9H6S0 1430 aaKnown RBP19.41■□□□□ 0.7
PCCA-206ENST00000428969 NUTM2FA1L443 756 aa19.4■□□□□ 0.7
PCCA-206ENST00000428969 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
PCCA-206ENST00000428969 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
PCCA-206ENST00000428969 TMEM132EQ6IEE7 984 aa19.39■□□□□ 0.69
PCCA-206ENST00000428969 RALGAPBQ86X10 1494 aa19.39■□□□□ 0.69
PCCA-206ENST00000428969 GLI3P10071 1580 aa19.39■□□□□ 0.69
PCCA-206ENST00000428969 BLMP54132 1417 aaPredicted RBP19.38■□□□□ 0.69
PCCA-206ENST00000428969 MPHOSPH9Q99550 1183 aa19.38■□□□□ 0.69
PCCA-206ENST00000428969 ACIN1Q9UKV3 1341 aaKnown RBP19.37■□□□□ 0.69
PCCA-206ENST00000428969 KRT28Q7Z3Y7 464 aa19.37■□□□□ 0.69
PCCA-206ENST00000428969 TNS3Q68CZ2 1445 aa19.36■□□□□ 0.69
PCCA-206ENST00000428969 PSME1Q06323 249 aa19.36■□□□□ 0.69
PCCA-206ENST00000428969 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
PCCA-206ENST00000428969 SBNO1A3KN83 1393 aa19.34■□□□□ 0.69
PCCA-206ENST00000428969 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
PCCA-206ENST00000428969 NRXN1Q9ULB1 1477 aa19.34■□□□□ 0.69
PCCA-206ENST00000428969 NWD2Q9ULI1 1742 aa19.34■□□□□ 0.69
PCCA-206ENST00000428969 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
PCCA-206ENST00000428969 HAP1P54257 671 aaPredicted RBP19.33■□□□□ 0.68
PCCA-206ENST00000428969 VPS72Q15906 364 aa19.33■□□□□ 0.68
PCCA-206ENST00000428969 ARHGEF10O15013 1369 aa19.32■□□□□ 0.68
PCCA-206ENST00000428969 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
PCCA-206ENST00000428969 BRWD3Q6RI45 1802 aa19.31■□□□□ 0.68
PCCA-206ENST00000428969 ONECUT3O60422 494 aaPredicted RBP19.3■□□□□ 0.68
PCCA-206ENST00000428969 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
PCCA-206ENST00000428969 SEPT12Q8IYM1 358 aa19.3■□□□□ 0.68
PCCA-206ENST00000428969 ANKARQ7Z5J8 1434 aa19.3■□□□□ 0.68
PCCA-206ENST00000428969 PLCH1Q4KWH8 1693 aa19.3■□□□□ 0.68
PCCA-206ENST00000428969 ABCA3Q99758 1704 aa19.29■□□□□ 0.68
PCCA-206ENST00000428969 DLC1Q96QB1 1528 aa19.29■□□□□ 0.68
PCCA-206ENST00000428969 ADGRB2O60241 1585 aa19.27■□□□□ 0.67
PCCA-206ENST00000428969 CFAP70Q5T0N1 1121 aa19.26■□□□□ 0.67
PCCA-206ENST00000428969 CABLES1Q8TDN4 633 aa19.26■□□□□ 0.67
PCCA-206ENST00000428969 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
PCCA-206ENST00000428969 KRT27Q7Z3Y8 459 aa19.25■□□□□ 0.67
PCCA-206ENST00000428969 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
PCCA-206ENST00000428969 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
PCCA-206ENST00000428969 LMOD2Q6P5Q4 547 aa19.24■□□□□ 0.67
PCCA-206ENST00000428969 DEFB132Q7Z7B7 95 aa19.24■□□□□ 0.67
PCCA-206ENST00000428969 POGKQ9P215 609 aa19.23■□□□□ 0.67
PCCA-206ENST00000428969 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
PCCA-206ENST00000428969 FAM83GA6ND36 823 aa19.21■□□□□ 0.67
PCCA-206ENST00000428969 LRP5O75197 1615 aa19.21■□□□□ 0.67
PCCA-206ENST00000428969 GPRASP1Q5JY77 1395 aa19.2■□□□□ 0.66
PCCA-206ENST00000428969 NRAPQ86VF7 1730 aa19.2■□□□□ 0.66
PCCA-206ENST00000428969 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
PCCA-206ENST00000428969 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
PCCA-206ENST00000428969 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
PCCA-206ENST00000428969 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
PCCA-206ENST00000428969 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
PCCA-206ENST00000428969 BAG6P46379 1132 aa19.18■□□□□ 0.66
PCCA-206ENST00000428969 TULP4Q9NRJ4 1543 aa19.17■□□□□ 0.66
PCCA-206ENST00000428969 PLEKHG5O94827 1062 aa19.17■□□□□ 0.66
PCCA-206ENST00000428969 BTG4Q9NY30 223 aa19.17■□□□□ 0.66
PCCA-206ENST00000428969 A0A0G2JS52 829 aa19.16■□□□□ 0.66
PCCA-206ENST00000428969 MYT1Q01538 1121 aa19.16■□□□□ 0.66
PCCA-206ENST00000428969 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
PCCA-206ENST00000428969 STAC3Q96MF2 364 aa19.15■□□□□ 0.66
PCCA-206ENST00000428969 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.65
PCCA-206ENST00000428969 TRAK1Q9UPV9 953 aa19.13■□□□□ 0.65
PCCA-206ENST00000428969 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms