RNA–Protein interactions for RNA: ENST00000428895.1

BX088651.4-202, humanhuman

TSL 1 (best) BASIC

Gene BX088651.4, Length 1,479 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BX088651.4-202ENST00000428895 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
BX088651.4-202ENST00000428895 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
BX088651.4-202ENST00000428895 TECPR2O15040 1411 aa18.42■□□□□ 0.54
BX088651.4-202ENST00000428895 ARHGEF28Q8N1W1 1705 aaKnown RBP18.41■□□□□ 0.54
BX088651.4-202ENST00000428895 ATF3P18847 181 aa18.41■□□□□ 0.54
BX088651.4-202ENST00000428895 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
BX088651.4-202ENST00000428895 WAPLQ7Z5K2 1190 aa18.4■□□□□ 0.54
BX088651.4-202ENST00000428895 MST1RQ04912 1400 aa18.4■□□□□ 0.54
BX088651.4-202ENST00000428895 AHDC1Q5TGY3 1603 aaPredicted RBP18.39■□□□□ 0.54
BX088651.4-202ENST00000428895 COL16A1Q07092 1604 aaPredicted RBP18.39■□□□□ 0.53
BX088651.4-202ENST00000428895 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
BX088651.4-202ENST00000428895 DLC1Q96QB1 1528 aa18.38■□□□□ 0.53
BX088651.4-202ENST00000428895 ILDR2Q71H61 639 aa18.38■□□□□ 0.53
BX088651.4-202ENST00000428895 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
BX088651.4-202ENST00000428895 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
BX088651.4-202ENST00000428895 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
BX088651.4-202ENST00000428895 POGKQ9P215 609 aa18.36■□□□□ 0.53
BX088651.4-202ENST00000428895 BRINP3Q76B58 766 aa18.35■□□□□ 0.53
BX088651.4-202ENST00000428895 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
BX088651.4-202ENST00000428895 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
BX088651.4-202ENST00000428895 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.53
BX088651.4-202ENST00000428895 GPRASP1Q5JY77 1395 aa18.33■□□□□ 0.53
BX088651.4-202ENST00000428895 CDC42BPGQ6DT37 1551 aa18.32■□□□□ 0.52
BX088651.4-202ENST00000428895 JCADQ9P266 1359 aa18.32■□□□□ 0.52
BX088651.4-202ENST00000428895 C1orf167Q5SNV9 1468 aa18.31■□□□□ 0.52
BX088651.4-202ENST00000428895 SHPRHQ149N8 1683 aa18.31■□□□□ 0.52
BX088651.4-202ENST00000428895 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
BX088651.4-202ENST00000428895 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
BX088651.4-202ENST00000428895 MINK1Q8N4C8 1332 aaPredicted RBP18.29■□□□□ 0.52
BX088651.4-202ENST00000428895 HIRIP3Q9BW71 556 aaPredicted RBP18.28■□□□□ 0.52
BX088651.4-202ENST00000428895 CENPJQ9HC77 1338 aaPredicted RBP18.27■□□□□ 0.52
BX088651.4-202ENST00000428895 RGPD8O14715 1765 aaPredicted RBP18.27■□□□□ 0.51
BX088651.4-202ENST00000428895 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.51
BX088651.4-202ENST00000428895 FMN2Q9NZ56 1722 aa18.26■□□□□ 0.51
BX088651.4-202ENST00000428895 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
BX088651.4-202ENST00000428895 NUTM2FA1L443 756 aa18.24■□□□□ 0.51
BX088651.4-202ENST00000428895 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
BX088651.4-202ENST00000428895 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
BX088651.4-202ENST00000428895 LRP6O75581 1613 aa18.22■□□□□ 0.51
BX088651.4-202ENST00000428895 SOCS7O14512 581 aa18.21■□□□□ 0.51
BX088651.4-202ENST00000428895 ORAI2Q96SN7 254 aa18.21■□□□□ 0.51
BX088651.4-202ENST00000428895 USP47Q96K76 1375 aa18.21■□□□□ 0.51
BX088651.4-202ENST00000428895 WASLO00401 505 aaPredicted RBP18.2■□□□□ 0.5
BX088651.4-202ENST00000428895 USP32Q8NFA0 1604 aa18.19■□□□□ 0.5
BX088651.4-202ENST00000428895 ST20-MTHFSA0A0A6YYL1 179 aa18.19■□□□□ 0.5
BX088651.4-202ENST00000428895 DDX17Q92841 729 aaKnown RBP18.19■□□□□ 0.5
BX088651.4-202ENST00000428895 SOS2Q07890 1332 aaPredicted RBP18.18■□□□□ 0.5
BX088651.4-202ENST00000428895 LRRC59Q96AG4 307 aaKnown RBP18.18■□□□□ 0.5
BX088651.4-202ENST00000428895 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
BX088651.4-202ENST00000428895 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
BX088651.4-202ENST00000428895 TULP4Q9NRJ4 1543 aa18.16■□□□□ 0.5
BX088651.4-202ENST00000428895 ESCO1Q5FWF5 840 aa18.16■□□□□ 0.5
BX088651.4-202ENST00000428895 KIF1AQ12756 1690 aa18.16■□□□□ 0.5
BX088651.4-202ENST00000428895 ITSN1Q15811 1721 aa18.16■□□□□ 0.5
BX088651.4-202ENST00000428895 PXDNQ92626 1479 aa18.15■□□□□ 0.5
BX088651.4-202ENST00000428895 SRPK2P78362 688 aaKnown RBP18.14■□□□□ 0.5
BX088651.4-202ENST00000428895 EVC2Q86UK5 1308 aa18.14■□□□□ 0.49
BX088651.4-202ENST00000428895 SBNO2Q9Y2G9 1366 aa18.14■□□□□ 0.49
BX088651.4-202ENST00000428895 CABP2Q9NPB3 220 aa18.14■□□□□ 0.49
BX088651.4-202ENST00000428895 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
BX088651.4-202ENST00000428895 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
BX088651.4-202ENST00000428895 NPHP3Q7Z494 1330 aa18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 COL22A1Q8NFW1 1626 aaPredicted RBP18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 ATP7BP35670 1465 aa18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 NUDT16Q96DE0 195 aaKnown RBP18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 TESK2Q96S53 571 aa18.12■□□□□ 0.49
BX088651.4-202ENST00000428895 TOPAZ1Q8N9V7 1692 aa18.11■□□□□ 0.49
BX088651.4-202ENST00000428895 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
BX088651.4-202ENST00000428895 POTEAQ6S8J7 498 aa18.11■□□□□ 0.49
BX088651.4-202ENST00000428895 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
BX088651.4-202ENST00000428895 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
BX088651.4-202ENST00000428895 FOXO3O43524 673 aa18.08■□□□□ 0.49
BX088651.4-202ENST00000428895 PHF8Q9UPP1 1060 aa18.08■□□□□ 0.49
BX088651.4-202ENST00000428895 ZEB1P37275 1124 aaPredicted RBP18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 NUTM2BA6NNL0 878 aaPredicted RBP18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 NUTM2EB1AL46 878 aaPredicted RBP18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 NUTM2AQ8IVF1 878 aaPredicted RBP18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
BX088651.4-202ENST00000428895 MARF1Q9Y4F3 1742 aaKnown RBP18.06■□□□□ 0.48
BX088651.4-202ENST00000428895 TMF1P82094 1093 aa18.06■□□□□ 0.48
BX088651.4-202ENST00000428895 PPIP5K1Q6PFW1 1433 aa18.05■□□□□ 0.48
BX088651.4-202ENST00000428895 XPCQ01831 940 aaPredicted RBP18.04■□□□□ 0.48
BX088651.4-202ENST00000428895 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
BX088651.4-202ENST00000428895 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
BX088651.4-202ENST00000428895 ATAD2Q6PL18 1390 aa18.03■□□□□ 0.48
BX088651.4-202ENST00000428895 CABP1Q9NZU7 370 aa18.02■□□□□ 0.48
BX088651.4-202ENST00000428895 SPATA31A3Q5VYP0 1347 aa18.02■□□□□ 0.47
BX088651.4-202ENST00000428895 PSME1Q06323 249 aa18.01■□□□□ 0.47
BX088651.4-202ENST00000428895 ACEP12821 1306 aa18.01■□□□□ 0.47
BX088651.4-202ENST00000428895 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
BX088651.4-202ENST00000428895 TMC1Q8TDI8 760 aa18.01■□□□□ 0.47
BX088651.4-202ENST00000428895 AKAP12Q02952 1782 aa18■□□□□ 0.47
BX088651.4-202ENST00000428895 AFF2P51816 1311 aa18■□□□□ 0.47
BX088651.4-202ENST00000428895 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
BX088651.4-202ENST00000428895 SBNO1A3KN83 1393 aa17.99■□□□□ 0.47
BX088651.4-202ENST00000428895 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
BX088651.4-202ENST00000428895 CDCA8Q53HL2 280 aa17.99■□□□□ 0.47
BX088651.4-202ENST00000428895 PUS7Q96PZ0 661 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms