RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 PLEKHH1Q9ULM0 1364 aa22.38■■□□□ 1.17
MDM2-215ENST00000428863 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
MDM2-215ENST00000428863 C14orf93Q9H972 538 aaKnown RBP22.37■■□□□ 1.17
MDM2-215ENST00000428863 KNDC1Q76NI1 1749 aa22.37■■□□□ 1.17
MDM2-215ENST00000428863 MEX3CQ5U5Q3 659 aaKnown RBP22.36■■□□□ 1.17
MDM2-215ENST00000428863 CFAP70Q5T0N1 1121 aa22.35■■□□□ 1.17
MDM2-215ENST00000428863 PNPLA6Q8IY17 1366 aa22.35■■□□□ 1.17
MDM2-215ENST00000428863 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
MDM2-215ENST00000428863 CDC42BPGQ6DT37 1551 aa22.33■■□□□ 1.17
MDM2-215ENST00000428863 SOS2Q07890 1332 aaPredicted RBP22.33■■□□□ 1.17
MDM2-215ENST00000428863 MYOM2P54296 1465 aa22.33■■□□□ 1.16
MDM2-215ENST00000428863 HRCP23327 699 aa22.32■■□□□ 1.16
MDM2-215ENST00000428863 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
MDM2-215ENST00000428863 ESCO1Q5FWF5 840 aa22.29■■□□□ 1.16
MDM2-215ENST00000428863 ZNF772Q68DY9 489 aaPredicted RBP22.29■■□□□ 1.16
MDM2-215ENST00000428863 SIRT1Q96EB6 747 aa22.29■■□□□ 1.16
MDM2-215ENST00000428863 FMN2Q9NZ56 1722 aa22.26■■□□□ 1.15
MDM2-215ENST00000428863 AFF2P51816 1311 aa22.26■■□□□ 1.15
MDM2-215ENST00000428863 DHX57Q6P158 1386 aaKnown RBP22.25■■□□□ 1.15
MDM2-215ENST00000428863 RGPD8O14715 1765 aaPredicted RBP22.25■■□□□ 1.15
MDM2-215ENST00000428863 PXDNQ92626 1479 aa22.24■■□□□ 1.15
MDM2-215ENST00000428863 FOXO3O43524 673 aa22.24■■□□□ 1.15
MDM2-215ENST00000428863 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
MDM2-215ENST00000428863 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
MDM2-215ENST00000428863 C8orf37Q96NL8 207 aa22.23■■□□□ 1.15
MDM2-215ENST00000428863 ADGRB1O14514 1584 aa22.22■■□□□ 1.15
MDM2-215ENST00000428863 DCAF11Q8TEB1 546 aa22.22■■□□□ 1.15
MDM2-215ENST00000428863 NPHP3Q7Z494 1330 aa22.22■■□□□ 1.15
MDM2-215ENST00000428863 ADAMTS2O95450 1211 aa22.21■■□□□ 1.15
MDM2-215ENST00000428863 SAFB2Q14151 953 aaKnown RBP eCLIP22.21■■□□□ 1.15
MDM2-215ENST00000428863 PRAM1Q96QH2 718 aa22.21■■□□□ 1.15
MDM2-215ENST00000428863 COL22A1Q8NFW1 1626 aaPredicted RBP22.2■■□□□ 1.15
MDM2-215ENST00000428863 RXRBP28702 533 aa22.19■■□□□ 1.14
MDM2-215ENST00000428863 DLC1Q96QB1 1528 aa22.18■■□□□ 1.14
MDM2-215ENST00000428863 NGLY1Q96IV0 654 aa22.16■■□□□ 1.14
MDM2-215ENST00000428863 QTRT2Q9H974 415 aaKnown RBP22.16■■□□□ 1.14
MDM2-215ENST00000428863 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
MDM2-215ENST00000428863 KIF1AQ12756 1690 aa22.14■■□□□ 1.14
MDM2-215ENST00000428863 POGKQ9P215 609 aa22.14■■□□□ 1.13
MDM2-215ENST00000428863 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
MDM2-215ENST00000428863 KRT28Q7Z3Y7 464 aa22.12■■□□□ 1.13
MDM2-215ENST00000428863 STAC3Q96MF2 364 aa22.12■■□□□ 1.13
MDM2-215ENST00000428863 PHF8Q9UPP1 1060 aa22.12■■□□□ 1.13
MDM2-215ENST00000428863 MARF1Q9Y4F3 1742 aaKnown RBP22.11■■□□□ 1.13
MDM2-215ENST00000428863 CDK12Q9NYV4 1490 aaPredicted RBP22.11■■□□□ 1.13
MDM2-215ENST00000428863 FNBP4Q8N3X1 1017 aaPredicted RBP22.11■■□□□ 1.13
MDM2-215ENST00000428863 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
MDM2-215ENST00000428863 RBM6P78332 1123 aaKnown RBP22.1■■□□□ 1.13
MDM2-215ENST00000428863 HIRIP3Q9BW71 556 aaPredicted RBP22.1■■□□□ 1.13
MDM2-215ENST00000428863 ADGRB2O60241 1585 aa22.09■■□□□ 1.13
MDM2-215ENST00000428863 USP21Q9UK80 565 aa22.09■■□□□ 1.13
MDM2-215ENST00000428863 UPF1Q92900 1129 aaKnown RBP eCLIP22.08■■□□□ 1.13
MDM2-215ENST00000428863 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
MDM2-215ENST00000428863 RGS12O14924 1447 aa22.07■■□□□ 1.12
MDM2-215ENST00000428863 PMFBP1Q8TBY8 1022 aa22.06■■□□□ 1.12
MDM2-215ENST00000428863 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
MDM2-215ENST00000428863 PRR36Q9H6K5 1346 aa22.06■■□□□ 1.12
MDM2-215ENST00000428863 ANKARQ7Z5J8 1434 aa22.05■■□□□ 1.12
MDM2-215ENST00000428863 BCL9LQ86UU0 1499 aa22.04■■□□□ 1.12
MDM2-215ENST00000428863 ATRNO75882 1429 aa22.04■■□□□ 1.12
MDM2-215ENST00000428863 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
MDM2-215ENST00000428863 TRPC5Q9UL62 973 aaPredicted RBP22.02■■□□□ 1.12
MDM2-215ENST00000428863 TNS3Q68CZ2 1445 aa22.02■■□□□ 1.12
MDM2-215ENST00000428863 PSME1Q06323 249 aa22.01■■□□□ 1.11
MDM2-215ENST00000428863 NBPF1Q3BBV0 1214 aa22.01■■□□□ 1.11
MDM2-215ENST00000428863 CABLES1Q8TDN4 633 aa22.01■■□□□ 1.11
MDM2-215ENST00000428863 SBNO1A3KN83 1393 aa22■■□□□ 1.11
MDM2-215ENST00000428863 KIAA1210Q9ULL0 1709 aa22■■□□□ 1.11
MDM2-215ENST00000428863 TULP4Q9NRJ4 1543 aa22■■□□□ 1.11
MDM2-215ENST00000428863 TRPM3Q9HCF6 1732 aaPredicted RBP21.99■■□□□ 1.11
MDM2-215ENST00000428863 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
MDM2-215ENST00000428863 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
MDM2-215ENST00000428863 SLIT2O94813 1529 aa21.97■■□□□ 1.11
MDM2-215ENST00000428863 LMOD2Q6P5Q4 547 aa21.96■■□□□ 1.11
MDM2-215ENST00000428863 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.95■■□□□ 1.1
MDM2-215ENST00000428863 SIN3AQ96ST3 1273 aa21.95■■□□□ 1.1
MDM2-215ENST00000428863 UNC5CLQ8IV45 518 aa21.94■■□□□ 1.1
MDM2-215ENST00000428863 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
MDM2-215ENST00000428863 ALS2Q96Q42 1657 aa21.94■■□□□ 1.1
MDM2-215ENST00000428863 L3MBTL2Q969R5 705 aa21.93■■□□□ 1.1
MDM2-215ENST00000428863 NUDT16Q96DE0 195 aaKnown RBP21.93■■□□□ 1.1
MDM2-215ENST00000428863 GJD4Q96KN9 370 aaPredicted RBP21.93■■□□□ 1.1
MDM2-215ENST00000428863 CDK19Q9BWU1 502 aa21.93■■□□□ 1.1
MDM2-215ENST00000428863 ATP7BP35670 1465 aa21.92■■□□□ 1.1
MDM2-215ENST00000428863 ARHGEF10O15013 1369 aa21.92■■□□□ 1.1
MDM2-215ENST00000428863 GLI3P10071 1580 aa21.91■■□□□ 1.1
MDM2-215ENST00000428863 HAP1P54257 671 aaPredicted RBP21.9■■□□□ 1.1
MDM2-215ENST00000428863 NGDNQ8NEJ9 315 aaKnown RBP21.9■■□□□ 1.1
MDM2-215ENST00000428863 ITSN1Q15811 1721 aa21.89■■□□□ 1.1
MDM2-215ENST00000428863 GPRASP1Q5JY77 1395 aa21.89■■□□□ 1.1
MDM2-215ENST00000428863 PLCH1Q4KWH8 1693 aa21.89■■□□□ 1.1
MDM2-215ENST00000428863 FAM83GA6ND36 823 aa21.89■■□□□ 1.09
MDM2-215ENST00000428863 RALGAPBQ86X10 1494 aa21.88■■□□□ 1.09
MDM2-215ENST00000428863 NWD2Q9ULI1 1742 aa21.87■■□□□ 1.09
MDM2-215ENST00000428863 CRYBG1Q9Y4K1 1723 aa21.87■■□□□ 1.09
MDM2-215ENST00000428863 TOPAZ1Q8N9V7 1692 aa21.86■■□□□ 1.09
MDM2-215ENST00000428863 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
MDM2-215ENST00000428863 BRWD3Q6RI45 1802 aa21.85■■□□□ 1.09
MDM2-215ENST00000428863 PAK3O75914 559 aaPredicted RBP21.84■■□□□ 1.09
MDM2-215ENST00000428863 ATAD2Q6PL18 1390 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms