RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 DLC1Q96QB1 1528 aa15.58■□□□□ 0.09
CECR3-201ENST00000428828 PIK3R4Q99570 1358 aa15.58■□□□□ 0.08
CECR3-201ENST00000428828 UBE2Q2Q8WVN8 375 aa15.57■□□□□ 0.08
CECR3-201ENST00000428828 KCNA6P17658 529 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 PRAM1Q96QH2 718 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 POGKQ9P215 609 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 ABCC11Q96J66 1382 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 ROBO2Q9HCK4 1378 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 PLEKHH1Q9ULM0 1364 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 TECPR2O15040 1411 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 WAPLQ7Z5K2 1190 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 DMRT2Q9Y5R5 561 aa15.56■□□□□ 0.08
CECR3-201ENST00000428828 CENPJQ9HC77 1338 aaPredicted RBP15.56■□□□□ 0.08
CECR3-201ENST00000428828 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
CECR3-201ENST00000428828 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.55■□□□□ 0.08
CECR3-201ENST00000428828 PTCH1Q13635 1447 aa15.54■□□□□ 0.08
CECR3-201ENST00000428828 NALCNQ8IZF0 1738 aa15.54■□□□□ 0.08
CECR3-201ENST00000428828 ZNF335Q9H4Z2 1342 aaPredicted RBP15.54■□□□□ 0.08
CECR3-201ENST00000428828 XIRP1Q702N8 1843 aaKnown RBP15.53■□□□□ 0.08
CECR3-201ENST00000428828 RBM33Q96EV2 1170 aaKnown RBP15.53■□□□□ 0.08
CECR3-201ENST00000428828 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
CECR3-201ENST00000428828 FAM135BQ49AJ0 1406 aa15.52■□□□□ 0.08
CECR3-201ENST00000428828 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.07
CECR3-201ENST00000428828 POLR3GLQ9BT43 218 aa15.5■□□□□ 0.07
CECR3-201ENST00000428828 TESK2Q96S53 571 aa15.49■□□□□ 0.07
CECR3-201ENST00000428828 DISP3Q9P2K9 1392 aa15.49■□□□□ 0.07
CECR3-201ENST00000428828 TULP4Q9NRJ4 1543 aa15.49■□□□□ 0.07
CECR3-201ENST00000428828 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
CECR3-201ENST00000428828 C14orf37Q86TY3 774 aa15.48■□□□□ 0.07
CECR3-201ENST00000428828 RGPD8O14715 1765 aaPredicted RBP15.48■□□□□ 0.07
CECR3-201ENST00000428828 ADGRB2O60241 1585 aa15.47■□□□□ 0.07
CECR3-201ENST00000428828 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
CECR3-201ENST00000428828 SIRT1Q96EB6 747 aa15.47■□□□□ 0.07
CECR3-201ENST00000428828 SBNO2Q9Y2G9 1366 aa15.46■□□□□ 0.07
CECR3-201ENST00000428828 TMF1P82094 1093 aa15.46■□□□□ 0.07
CECR3-201ENST00000428828 LRRC7Q96NW7 1537 aa15.45■□□□□ 0.06
CECR3-201ENST00000428828 TMEM94Q12767 1356 aa15.45■□□□□ 0.06
CECR3-201ENST00000428828 CCER2I3L3R5 266 aa15.45■□□□□ 0.06
CECR3-201ENST00000428828 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
CECR3-201ENST00000428828 MYOM1P52179 1685 aa15.44■□□□□ 0.06
CECR3-201ENST00000428828 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 WASHC2AQ641Q2 1341 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 EVC2Q86UK5 1308 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 LTBP4Q8N2S1 1624 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
CECR3-201ENST00000428828 CDC42BPGQ6DT37 1551 aa15.43■□□□□ 0.06
CECR3-201ENST00000428828 NUTM2FA1L443 756 aa15.42■□□□□ 0.06
CECR3-201ENST00000428828 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
CECR3-201ENST00000428828 CCDC7Q96M83 1385 aa15.42■□□□□ 0.06
CECR3-201ENST00000428828 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
CECR3-201ENST00000428828 ITSN1Q15811 1721 aa15.41■□□□□ 0.06
CECR3-201ENST00000428828 USP32Q8NFA0 1604 aa15.41■□□□□ 0.06
CECR3-201ENST00000428828 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
CECR3-201ENST00000428828 TOPAZ1Q8N9V7 1692 aa15.39■□□□□ 0.05
CECR3-201ENST00000428828 SLC24A1O60721 1099 aa15.39■□□□□ 0.05
CECR3-201ENST00000428828 CDCA8Q53HL2 280 aa15.38■□□□□ 0.05
CECR3-201ENST00000428828 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
CECR3-201ENST00000428828 MSH6P52701 1360 aa15.37■□□□□ 0.05
CECR3-201ENST00000428828 ATP7BP35670 1465 aa15.37■□□□□ 0.05
CECR3-201ENST00000428828 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
CECR3-201ENST00000428828 NCOA3Q9Y6Q9 1424 aa15.35■□□□□ 0.05
CECR3-201ENST00000428828 C19orf44Q9H6X5 657 aa15.35■□□□□ 0.05
CECR3-201ENST00000428828 PRR36Q9H6K5 1346 aa15.35■□□□□ 0.05
CECR3-201ENST00000428828 DDX10Q13206 875 aaKnown RBP15.35■□□□□ 0.05
CECR3-201ENST00000428828 ATF3P18847 181 aa15.34■□□□□ 0.05
CECR3-201ENST00000428828 ATAD2Q6PL18 1390 aa15.34■□□□□ 0.05
CECR3-201ENST00000428828 NUDT16Q96DE0 195 aaKnown RBP15.33■□□□□ 0.05
CECR3-201ENST00000428828 PPIP5K1Q6PFW1 1433 aa15.33■□□□□ 0.04
CECR3-201ENST00000428828 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
CECR3-201ENST00000428828 DCCP43146 1447 aa15.33■□□□□ 0.04
CECR3-201ENST00000428828 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
CECR3-201ENST00000428828 SLC12A5Q9H2X9 1139 aa15.31■□□□□ 0.04
CECR3-201ENST00000428828 ANKARQ7Z5J8 1434 aa15.31■□□□□ 0.04
CECR3-201ENST00000428828 MST1RQ04912 1400 aa15.3■□□□□ 0.04
CECR3-201ENST00000428828 CADPS2Q86UW7 1296 aa15.3■□□□□ 0.04
CECR3-201ENST00000428828 CABP1Q9NZU7 370 aa15.3■□□□□ 0.04
CECR3-201ENST00000428828 MON2Q7Z3U7 1717 aa15.29■□□□□ 0.04
CECR3-201ENST00000428828 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
CECR3-201ENST00000428828 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
CECR3-201ENST00000428828 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
CECR3-201ENST00000428828 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
CECR3-201ENST00000428828 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
CECR3-201ENST00000428828 ESCO1Q5FWF5 840 aa15.28■□□□□ 0.04
CECR3-201ENST00000428828 ORAI2Q96SN7 254 aa15.27■□□□□ 0.03
CECR3-201ENST00000428828 PANK3Q9H999 370 aa15.27■□□□□ 0.03
CECR3-201ENST00000428828 CD163L1Q9NR16 1453 aa15.26■□□□□ 0.03
CECR3-201ENST00000428828 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
CECR3-201ENST00000428828 NINLQ9Y2I6 1382 aa15.26■□□□□ 0.03
CECR3-201ENST00000428828 KIF20BQ96Q89 1820 aa15.26■□□□□ 0.03
CECR3-201ENST00000428828 ROBO1Q9Y6N7 1651 aa15.26■□□□□ 0.03
CECR3-201ENST00000428828 CNGB1Q14028 1251 aaPredicted RBP15.25■□□□□ 0.03
CECR3-201ENST00000428828 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
CECR3-201ENST00000428828 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
CECR3-201ENST00000428828 NGDNQ8NEJ9 315 aaKnown RBP15.24■□□□□ 0.03
CECR3-201ENST00000428828 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
CECR3-201ENST00000428828 PHF8Q9UPP1 1060 aa15.24■□□□□ 0.03
CECR3-201ENST00000428828 ACEP12821 1306 aa15.24■□□□□ 0.03
CECR3-201ENST00000428828 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
CECR3-201ENST00000428828 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms