RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 AMOTL2Q9Y2J4 779 aa17.52■□□□□ 0.4
HMGB3P4-201ENST00000428776 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
HMGB3P4-201ENST00000428776 PTCH1Q13635 1447 aa17.51■□□□□ 0.39
HMGB3P4-201ENST00000428776 WAPLQ7Z5K2 1190 aa17.51■□□□□ 0.39
HMGB3P4-201ENST00000428776 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.51■□□□□ 0.39
HMGB3P4-201ENST00000428776 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
HMGB3P4-201ENST00000428776 MINK1Q8N4C8 1332 aaPredicted RBP17.5■□□□□ 0.39
HMGB3P4-201ENST00000428776 STRCQ7RTU9 1775 aa17.5■□□□□ 0.39
HMGB3P4-201ENST00000428776 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
HMGB3P4-201ENST00000428776 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
HMGB3P4-201ENST00000428776 PANK3Q9H999 370 aa17.47■□□□□ 0.39
HMGB3P4-201ENST00000428776 NWD1Q149M9 1564 aa17.46■□□□□ 0.39
HMGB3P4-201ENST00000428776 ATAD2Q6PL18 1390 aa17.45■□□□□ 0.38
HMGB3P4-201ENST00000428776 NINLQ9Y2I6 1382 aa17.45■□□□□ 0.38
HMGB3P4-201ENST00000428776 HSPA2P54652 639 aa17.45■□□□□ 0.38
HMGB3P4-201ENST00000428776 SRPK2P78362 688 aaKnown RBP17.45■□□□□ 0.38
HMGB3P4-201ENST00000428776 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
HMGB3P4-201ENST00000428776 PER1O15534 1290 aaPredicted RBP17.44■□□□□ 0.38
HMGB3P4-201ENST00000428776 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
HMGB3P4-201ENST00000428776 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
HMGB3P4-201ENST00000428776 KCNA6P17658 529 aa17.43■□□□□ 0.38
HMGB3P4-201ENST00000428776 KTN1Q86UP2 1357 aaKnown RBP17.41■□□□□ 0.38
HMGB3P4-201ENST00000428776 TMC1Q8TDI8 760 aa17.41■□□□□ 0.38
HMGB3P4-201ENST00000428776 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
HMGB3P4-201ENST00000428776 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
HMGB3P4-201ENST00000428776 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
HMGB3P4-201ENST00000428776 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
HMGB3P4-201ENST00000428776 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
HMGB3P4-201ENST00000428776 USP32Q8NFA0 1604 aa17.39■□□□□ 0.38
HMGB3P4-201ENST00000428776 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
HMGB3P4-201ENST00000428776 STRCP1A6NGW2 1772 aa17.39■□□□□ 0.37
HMGB3P4-201ENST00000428776 RGPD8O14715 1765 aaPredicted RBP17.39■□□□□ 0.37
HMGB3P4-201ENST00000428776 KNSTRNQ9Y448 316 aa17.39■□□□□ 0.37
HMGB3P4-201ENST00000428776 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
HMGB3P4-201ENST00000428776 NKTRP30414 1462 aaKnown RBP17.38■□□□□ 0.37
HMGB3P4-201ENST00000428776 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
HMGB3P4-201ENST00000428776 ANKRD36BQ8N2N9 1353 aa17.37■□□□□ 0.37
HMGB3P4-201ENST00000428776 RALBP1Q15311 655 aa17.36■□□□□ 0.37
HMGB3P4-201ENST00000428776 NPC1L1Q9UHC9 1359 aa17.36■□□□□ 0.37
HMGB3P4-201ENST00000428776 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
HMGB3P4-201ENST00000428776 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
HMGB3P4-201ENST00000428776 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
HMGB3P4-201ENST00000428776 ATP7BP35670 1465 aa17.35■□□□□ 0.37
HMGB3P4-201ENST00000428776 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
HMGB3P4-201ENST00000428776 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.37
HMGB3P4-201ENST00000428776 CD163L1Q9NR16 1453 aa17.33■□□□□ 0.37
HMGB3P4-201ENST00000428776 PPIP5K1Q6PFW1 1433 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 PARD3Q8TEW0 1356 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 CABP1Q9NZU7 370 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 KIF20BQ96Q89 1820 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 ANKRD26Q9UPS8 1709 aa17.33■□□□□ 0.36
HMGB3P4-201ENST00000428776 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
HMGB3P4-201ENST00000428776 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
HMGB3P4-201ENST00000428776 HDGFL2Q7Z4V5 671 aaPredicted RBP17.32■□□□□ 0.36
HMGB3P4-201ENST00000428776 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
HMGB3P4-201ENST00000428776 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
HMGB3P4-201ENST00000428776 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
HMGB3P4-201ENST00000428776 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
HMGB3P4-201ENST00000428776 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
HMGB3P4-201ENST00000428776 PRR36Q9H6K5 1346 aa17.3■□□□□ 0.36
HMGB3P4-201ENST00000428776 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
HMGB3P4-201ENST00000428776 XIRP1Q702N8 1843 aaKnown RBP17.3■□□□□ 0.36
HMGB3P4-201ENST00000428776 NCOA3Q9Y6Q9 1424 aa17.3■□□□□ 0.36
HMGB3P4-201ENST00000428776 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
HMGB3P4-201ENST00000428776 CPSF1Q10570 1443 aaKnown RBP17.29■□□□□ 0.36
HMGB3P4-201ENST00000428776 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
HMGB3P4-201ENST00000428776 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
HMGB3P4-201ENST00000428776 PLEKHG3A1L390 1219 aa17.27■□□□□ 0.36
HMGB3P4-201ENST00000428776 NSD2O96028 1365 aa17.27■□□□□ 0.35
HMGB3P4-201ENST00000428776 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
HMGB3P4-201ENST00000428776 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P4-201ENST00000428776 NRKQ7Z2Y5 1582 aa17.24■□□□□ 0.35
HMGB3P4-201ENST00000428776 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
HMGB3P4-201ENST00000428776 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
HMGB3P4-201ENST00000428776 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
HMGB3P4-201ENST00000428776 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
HMGB3P4-201ENST00000428776 NLRP13Q86W25 1043 aa17.23■□□□□ 0.35
HMGB3P4-201ENST00000428776 C19orf44Q9H6X5 657 aa17.23■□□□□ 0.35
HMGB3P4-201ENST00000428776 MRS2Q9HD23 443 aa17.23■□□□□ 0.35
HMGB3P4-201ENST00000428776 TMEM94Q12767 1356 aa17.22■□□□□ 0.35
HMGB3P4-201ENST00000428776 ACEP12821 1306 aa17.21■□□□□ 0.35
HMGB3P4-201ENST00000428776 DCCP43146 1447 aa17.21■□□□□ 0.35
HMGB3P4-201ENST00000428776 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
HMGB3P4-201ENST00000428776 CCDC184Q52MB2 194 aa17.21■□□□□ 0.35
HMGB3P4-201ENST00000428776 MORC1Q86VD1 984 aa17.2■□□□□ 0.34
HMGB3P4-201ENST00000428776 FYB1O15117 783 aa17.19■□□□□ 0.34
HMGB3P4-201ENST00000428776 PPP2R1AP30153 589 aa17.19■□□□□ 0.34
HMGB3P4-201ENST00000428776 LRRC7Q96NW7 1537 aa17.19■□□□□ 0.34
HMGB3P4-201ENST00000428776 KIF1AQ12756 1690 aa17.19■□□□□ 0.34
HMGB3P4-201ENST00000428776 ZNF335Q9H4Z2 1342 aaPredicted RBP17.19■□□□□ 0.34
HMGB3P4-201ENST00000428776 USP6P35125 1406 aa17.18■□□□□ 0.34
HMGB3P4-201ENST00000428776 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
HMGB3P4-201ENST00000428776 NGDNQ8NEJ9 315 aaKnown RBP17.17■□□□□ 0.34
HMGB3P4-201ENST00000428776 MSH6P52701 1360 aa17.16■□□□□ 0.34
HMGB3P4-201ENST00000428776 ATF3P18847 181 aa17.16■□□□□ 0.34
HMGB3P4-201ENST00000428776 PMFBP1Q8TBY8 1022 aa17.16■□□□□ 0.34
HMGB3P4-201ENST00000428776 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
HMGB3P4-201ENST00000428776 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
HMGB3P4-201ENST00000428776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms