RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SAFB2Q14151 953 aaKnown RBP eCLIP9.67□□□□□ -0.86
CNOT4-206ENST00000428680 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
CNOT4-206ENST00000428680 ADGRL3Q9HAR2 1447 aa9.66□□□□□ -0.86
CNOT4-206ENST00000428680 BRD4O60885 1362 aaPredicted RBP9.66□□□□□ -0.86
CNOT4-206ENST00000428680 SRPK2P78362 688 aaKnown RBP9.66□□□□□ -0.86
CNOT4-206ENST00000428680 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
CNOT4-206ENST00000428680 KIF1AQ12756 1690 aa9.66□□□□□ -0.86
CNOT4-206ENST00000428680 HRCP23327 699 aa9.65□□□□□ -0.86
CNOT4-206ENST00000428680 IDI1Q13907 227 aa9.65□□□□□ -0.86
CNOT4-206ENST00000428680 PSME1Q06323 249 aa9.65□□□□□ -0.86
CNOT4-206ENST00000428680 SLAIN2Q9P270 581 aa9.65□□□□□ -0.86
CNOT4-206ENST00000428680 MSH5O43196 834 aa9.64□□□□□ -0.87
CNOT4-206ENST00000428680 SF3B2Q13435 895 aaKnown RBP9.64□□□□□ -0.87
CNOT4-206ENST00000428680 ROBO1Q9Y6N7 1651 aa9.63□□□□□ -0.87
CNOT4-206ENST00000428680 XRN1Q8IZH2 1706 aaKnown RBP9.63□□□□□ -0.87
CNOT4-206ENST00000428680 SALL2Q9Y467 1007 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-206ENST00000428680 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 NPHP3Q7Z494 1330 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 E9PCH4 1651 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 ATAD2Q6PL18 1390 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 CDC42BPGQ6DT37 1551 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 GOLGA2Q08379 1002 aa9.62□□□□□ -0.87
CNOT4-206ENST00000428680 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
CNOT4-206ENST00000428680 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-206ENST00000428680 ZNF330Q9Y3S2 320 aaPredicted RBP9.6□□□□□ -0.87
CNOT4-206ENST00000428680 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
CNOT4-206ENST00000428680 CCDC144AA2RUR9 1427 aa9.6□□□□□ -0.87
CNOT4-206ENST00000428680 EVA1CP58658 441 aa9.6□□□□□ -0.87
CNOT4-206ENST00000428680 NUDCQ9Y266 331 aa9.6□□□□□ -0.87
CNOT4-206ENST00000428680 ANKARQ7Z5J8 1434 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 NHSL1Q5SYE7 1610 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 LTKP29376 864 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
CNOT4-206ENST00000428680 RXRBP28702 533 aa9.59□□□□□ -0.87
CNOT4-206ENST00000428680 TECPR2O15040 1411 aa9.58□□□□□ -0.88
CNOT4-206ENST00000428680 MYOM2P54296 1465 aa9.58□□□□□ -0.88
CNOT4-206ENST00000428680 RBM6P78332 1123 aaKnown RBP9.58□□□□□ -0.88
CNOT4-206ENST00000428680 DLC1Q96QB1 1528 aa9.58□□□□□ -0.88
CNOT4-206ENST00000428680 ADAMTS13Q76LX8 1427 aa9.58□□□□□ -0.88
CNOT4-206ENST00000428680 ASXL1Q8IXJ9 1541 aa9.57□□□□□ -0.88
CNOT4-206ENST00000428680 MYH16Q9H6N6 1097 aa9.57□□□□□ -0.88
CNOT4-206ENST00000428680 COL16A1Q07092 1604 aaPredicted RBP9.57□□□□□ -0.88
CNOT4-206ENST00000428680 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
CNOT4-206ENST00000428680 TRPC5Q9UL62 973 aaPredicted RBP9.57□□□□□ -0.88
CNOT4-206ENST00000428680 AMOTL2Q9Y2J4 779 aa9.57□□□□□ -0.88
CNOT4-206ENST00000428680 CARD11Q9BXL7 1154 aa9.56□□□□□ -0.88
CNOT4-206ENST00000428680 MAPK8IP3Q9UPT6 1336 aa9.56□□□□□ -0.88
CNOT4-206ENST00000428680 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
CNOT4-206ENST00000428680 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-206ENST00000428680 G3V3G9 751 aa9.55□□□□□ -0.88
CNOT4-206ENST00000428680 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
CNOT4-206ENST00000428680 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-206ENST00000428680 TNNT2P45379 298 aaPredicted RBP9.55□□□□□ -0.88
CNOT4-206ENST00000428680 NEXMIFQ5QGS0 1516 aa9.54□□□□□ -0.88
CNOT4-206ENST00000428680 HDGFL2Q7Z4V5 671 aaPredicted RBP9.54□□□□□ -0.88
CNOT4-206ENST00000428680 ABCC11Q96J66 1382 aa9.54□□□□□ -0.88
CNOT4-206ENST00000428680 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
CNOT4-206ENST00000428680 STRCP1A6NGW2 1772 aa9.54□□□□□ -0.88
CNOT4-206ENST00000428680 XIRP1Q702N8 1843 aaKnown RBP9.53□□□□□ -0.88
CNOT4-206ENST00000428680 MST1RQ04912 1400 aa9.53□□□□□ -0.88
CNOT4-206ENST00000428680 U2SURPO15042 1029 aaKnown RBP9.53□□□□□ -0.88
CNOT4-206ENST00000428680 LAS1LQ9Y4W2 734 aaKnown RBP9.53□□□□□ -0.88
CNOT4-206ENST00000428680 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
CNOT4-206ENST00000428680 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.52□□□□□ -0.89
CNOT4-206ENST00000428680 GPRASP1Q5JY77 1395 aa9.52□□□□□ -0.89
CNOT4-206ENST00000428680 DIEXFQ68CQ4 756 aaKnown RBP9.51□□□□□ -0.89
CNOT4-206ENST00000428680 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
CNOT4-206ENST00000428680 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.51□□□□□ -0.89
CNOT4-206ENST00000428680 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
CNOT4-206ENST00000428680 SLC26A8Q96RN1 970 aa9.51□□□□□ -0.89
CNOT4-206ENST00000428680 NAIPQ13075 1403 aa9.51□□□□□ -0.89
CNOT4-206ENST00000428680 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
CNOT4-206ENST00000428680 ATP7BP35670 1465 aa9.5□□□□□ -0.89
CNOT4-206ENST00000428680 RTF1Q92541 710 aaKnown RBP9.5□□□□□ -0.89
CNOT4-206ENST00000428680 PPLO60437 1756 aa9.5□□□□□ -0.89
CNOT4-206ENST00000428680 C1orf167Q5SNV9 1468 aa9.5□□□□□ -0.89
CNOT4-206ENST00000428680 ISY1Q9ULR0 285 aaKnown RBP9.49□□□□□ -0.89
CNOT4-206ENST00000428680 CLTCL1P53675 1640 aa9.49□□□□□ -0.89
CNOT4-206ENST00000428680 PNPLA6Q8IY17 1366 aa9.49□□□□□ -0.89
CNOT4-206ENST00000428680 ADGRB2O60241 1585 aa9.49□□□□□ -0.89
CNOT4-206ENST00000428680 HSP90AA1P07900 732 aaKnown RBP9.49□□□□□ -0.89
CNOT4-206ENST00000428680 SOS2Q07890 1332 aaPredicted RBP9.48□□□□□ -0.89
CNOT4-206ENST00000428680 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
CNOT4-206ENST00000428680 ZRANB1Q9UGI0 708 aa9.47□□□□□ -0.89
CNOT4-206ENST00000428680 NRXN1Q9ULB1 1477 aa9.47□□□□□ -0.89
CNOT4-206ENST00000428680 PNNQ9H307 717 aaKnown RBP9.47□□□□□ -0.89
CNOT4-206ENST00000428680 CDK11BP21127 795 aaKnown RBP9.47□□□□□ -0.89
CNOT4-206ENST00000428680 BRINP3Q76B58 766 aa9.47□□□□□ -0.89
CNOT4-206ENST00000428680 NUTM2BA6NNL0 878 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-206ENST00000428680 NUTM2EB1AL46 878 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-206ENST00000428680 ITSN1Q15811 1721 aa9.47□□□□□ -0.89
CNOT4-206ENST00000428680 NUTM2AQ8IVF1 878 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-206ENST00000428680 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-206ENST00000428680 AMPHP49418 695 aa9.46□□□□□ -0.89
CNOT4-206ENST00000428680 ILDR2Q71H61 639 aa9.46□□□□□ -0.89
CNOT4-206ENST00000428680 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-206ENST00000428680 PPP1R1BQ9UD71 204 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-206ENST00000428680 NWD2Q9ULI1 1742 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms