RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TESK2Q96S53 571 aa11.05□□□□□ -0.64
HMGA1P4-201ENST00000428643 ZNF335Q9H4Z2 1342 aaPredicted RBP11.05□□□□□ -0.64
HMGA1P4-201ENST00000428643 TMF1P82094 1093 aa11.04□□□□□ -0.64
HMGA1P4-201ENST00000428643 C14orf37Q86TY3 774 aa11.04□□□□□ -0.64
HMGA1P4-201ENST00000428643 POLR3GLQ9BT43 218 aa11.04□□□□□ -0.64
HMGA1P4-201ENST00000428643 DISP3Q9P2K9 1392 aa11.03□□□□□ -0.64
HMGA1P4-201ENST00000428643 PROSER2Q86WR7 435 aaPredicted RBP11.03□□□□□ -0.64
HMGA1P4-201ENST00000428643 SLC24A1O60721 1099 aa11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 EVC2Q86UK5 1308 aa11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 TMEM94Q12767 1356 aa11.02□□□□□ -0.65
HMGA1P4-201ENST00000428643 CDCA8Q53HL2 280 aa11.01□□□□□ -0.65
HMGA1P4-201ENST00000428643 KIF7Q2M1P5 1343 aa11.01□□□□□ -0.65
HMGA1P4-201ENST00000428643 CCDC7Q96M83 1385 aa11.01□□□□□ -0.65
HMGA1P4-201ENST00000428643 ADGRL3Q9HAR2 1447 aa11.01□□□□□ -0.65
HMGA1P4-201ENST00000428643 ADGRB2O60241 1585 aa11□□□□□ -0.65
HMGA1P4-201ENST00000428643 SRPK2P78362 688 aaKnown RBP11□□□□□ -0.65
HMGA1P4-201ENST00000428643 WASHC2AQ641Q2 1341 aa11□□□□□ -0.65
HMGA1P4-201ENST00000428643 C11orf95C9JLR9 678 aaPredicted RBP10.99□□□□□ -0.65
HMGA1P4-201ENST00000428643 WASLO00401 505 aaPredicted RBP10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 LRRC7Q96NW7 1537 aa10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
HMGA1P4-201ENST00000428643 CERKQ8TCT0 537 aa10.97□□□□□ -0.65
HMGA1P4-201ENST00000428643 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
HMGA1P4-201ENST00000428643 MSH6P52701 1360 aa10.97□□□□□ -0.65
HMGA1P4-201ENST00000428643 ATAD2Q6PL18 1390 aa10.97□□□□□ -0.65
HMGA1P4-201ENST00000428643 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
HMGA1P4-201ENST00000428643 NCOA3Q9Y6Q9 1424 aa10.96□□□□□ -0.65
HMGA1P4-201ENST00000428643 NUTM2FA1L443 756 aa10.95□□□□□ -0.66
HMGA1P4-201ENST00000428643 TMC1Q8TDI8 760 aa10.95□□□□□ -0.66
HMGA1P4-201ENST00000428643 ATP7BP35670 1465 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 DCCP43146 1447 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 ANKARQ7Z5J8 1434 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 ATF3P18847 181 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 C19orf44Q9H6X5 657 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
HMGA1P4-201ENST00000428643 PRR36Q9H6K5 1346 aa10.93□□□□□ -0.66
HMGA1P4-201ENST00000428643 DDX10Q13206 875 aaKnown RBP10.93□□□□□ -0.66
HMGA1P4-201ENST00000428643 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
HMGA1P4-201ENST00000428643 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
HMGA1P4-201ENST00000428643 NINLQ9Y2I6 1382 aa10.92□□□□□ -0.66
HMGA1P4-201ENST00000428643 CADPS2Q86UW7 1296 aa10.92□□□□□ -0.66
HMGA1P4-201ENST00000428643 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
HMGA1P4-201ENST00000428643 PPIP5K1Q6PFW1 1433 aa10.92□□□□□ -0.66
HMGA1P4-201ENST00000428643 CCDC61Q9Y6R9 512 aa10.91□□□□□ -0.66
HMGA1P4-201ENST00000428643 MYOM1P52179 1685 aa10.9□□□□□ -0.66
HMGA1P4-201ENST00000428643 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
HMGA1P4-201ENST00000428643 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
HMGA1P4-201ENST00000428643 MST1RQ04912 1400 aa10.9□□□□□ -0.66
HMGA1P4-201ENST00000428643 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
HMGA1P4-201ENST00000428643 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
HMGA1P4-201ENST00000428643 TERF2IPQ9NYB0 399 aa10.89□□□□□ -0.67
HMGA1P4-201ENST00000428643 ANKRD36BQ8N2N9 1353 aa10.89□□□□□ -0.67
HMGA1P4-201ENST00000428643 ESCO1Q5FWF5 840 aa10.88□□□□□ -0.67
HMGA1P4-201ENST00000428643 HDGFL2Q7Z4V5 671 aaPredicted RBP10.88□□□□□ -0.67
HMGA1P4-201ENST00000428643 PANK3Q9H999 370 aa10.88□□□□□ -0.67
HMGA1P4-201ENST00000428643 TOPAZ1Q8N9V7 1692 aa10.88□□□□□ -0.67
HMGA1P4-201ENST00000428643 A0A1W2PP64 1363 aa10.88□□□□□ -0.67
HMGA1P4-201ENST00000428643 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
HMGA1P4-201ENST00000428643 PMFBP1Q8TBY8 1022 aa10.87□□□□□ -0.67
HMGA1P4-201ENST00000428643 PHF8Q9UPP1 1060 aa10.87□□□□□ -0.67
HMGA1P4-201ENST00000428643 XIRP1Q702N8 1843 aaKnown RBP10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 NSD3Q9BZ95 1437 aa10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 NGDNQ8NEJ9 315 aaKnown RBP10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 KTN1Q86UP2 1357 aaKnown RBP10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 ITSN1Q15811 1721 aa10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 CD163L1Q9NR16 1453 aa10.86□□□□□ -0.67
HMGA1P4-201ENST00000428643 ACEP12821 1306 aa10.85□□□□□ -0.67
HMGA1P4-201ENST00000428643 PLEKHG3A1L390 1219 aa10.85□□□□□ -0.67
HMGA1P4-201ENST00000428643 ORAI2Q96SN7 254 aa10.85□□□□□ -0.67
HMGA1P4-201ENST00000428643 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
HMGA1P4-201ENST00000428643 KNSTRNQ9Y448 316 aa10.85□□□□□ -0.67
HMGA1P4-201ENST00000428643 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
HMGA1P4-201ENST00000428643 POLR3AO14802 1390 aaPredicted RBP10.84□□□□□ -0.67
HMGA1P4-201ENST00000428643 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
HMGA1P4-201ENST00000428643 CPSF1Q10570 1443 aaKnown RBP10.84□□□□□ -0.67
HMGA1P4-201ENST00000428643 EDC4Q6P2E9 1401 aaKnown RBP10.84□□□□□ -0.67
HMGA1P4-201ENST00000428643 KIF1AQ12756 1690 aa10.83□□□□□ -0.68
HMGA1P4-201ENST00000428643 CARD14Q9BXL6 1004 aa10.83□□□□□ -0.68
HMGA1P4-201ENST00000428643 USP6P35125 1406 aa10.83□□□□□ -0.68
HMGA1P4-201ENST00000428643 CGNL1Q0VF96 1302 aa10.83□□□□□ -0.68
HMGA1P4-201ENST00000428643 UBAP1LF5GYI3 381 aa10.82□□□□□ -0.68
HMGA1P4-201ENST00000428643 BRINP3Q76B58 766 aa10.82□□□□□ -0.68
HMGA1P4-201ENST00000428643 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.82□□□□□ -0.68
HMGA1P4-201ENST00000428643 ZNF692Q9BU19 519 aaPredicted RBP10.82□□□□□ -0.68
HMGA1P4-201ENST00000428643 SCAF1Q9H7N4 1312 aaKnown RBP10.82□□□□□ -0.68
HMGA1P4-201ENST00000428643 FOXO3O43524 673 aa10.81□□□□□ -0.68
HMGA1P4-201ENST00000428643 TOM1O60784 492 aa10.81□□□□□ -0.68
HMGA1P4-201ENST00000428643 XPCQ01831 940 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P4-201ENST00000428643 PSME1Q06323 249 aa10.81□□□□□ -0.68
HMGA1P4-201ENST00000428643 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
HMGA1P4-201ENST00000428643 ANP32CO43423 234 aa10.8□□□□□ -0.68
HMGA1P4-201ENST00000428643 PAK3O75914 559 aaPredicted RBP10.8□□□□□ -0.68
HMGA1P4-201ENST00000428643 CC2D1BQ5T0F9 858 aaKnown RBP10.8□□□□□ -0.68
HMGA1P4-201ENST00000428643 MON2Q7Z3U7 1717 aa10.79□□□□□ -0.68
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