RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-208ENST00000428555 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
TRIM39-208ENST00000428555 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
TRIM39-208ENST00000428555 TECPR2O15040 1411 aa13.78□□□□□ -0.2
TRIM39-208ENST00000428555 MYOM2P54296 1465 aa13.77□□□□□ -0.21
TRIM39-208ENST00000428555 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
TRIM39-208ENST00000428555 POTEAQ6S8J7 498 aa13.77□□□□□ -0.21
TRIM39-208ENST00000428555 POGKQ9P215 609 aa13.77□□□□□ -0.21
TRIM39-208ENST00000428555 PHLPP1O60346 1717 aa13.76□□□□□ -0.21
TRIM39-208ENST00000428555 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
TRIM39-208ENST00000428555 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
TRIM39-208ENST00000428555 SIN3AQ96ST3 1273 aa13.76□□□□□ -0.21
TRIM39-208ENST00000428555 FOXO3O43524 673 aa13.75□□□□□ -0.21
TRIM39-208ENST00000428555 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
TRIM39-208ENST00000428555 COL16A1Q07092 1604 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-208ENST00000428555 AHDC1Q5TGY3 1603 aaPredicted RBP13.75□□□□□ -0.21
TRIM39-208ENST00000428555 SOS2Q07890 1332 aaPredicted RBP13.74□□□□□ -0.21
TRIM39-208ENST00000428555 NALCNQ8IZF0 1738 aa13.74□□□□□ -0.21
TRIM39-208ENST00000428555 XPCQ01831 940 aaPredicted RBP13.73□□□□□ -0.21
TRIM39-208ENST00000428555 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
TRIM39-208ENST00000428555 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-208ENST00000428555 HIRIP3Q9BW71 556 aaPredicted RBP13.72□□□□□ -0.21
TRIM39-208ENST00000428555 NBPF1Q3BBV0 1214 aa13.71□□□□□ -0.21
TRIM39-208ENST00000428555 L3MBTL2Q969R5 705 aa13.71□□□□□ -0.21
TRIM39-208ENST00000428555 NPHP3Q7Z494 1330 aa13.7□□□□□ -0.22
TRIM39-208ENST00000428555 MINK1Q8N4C8 1332 aaPredicted RBP13.7□□□□□ -0.22
TRIM39-208ENST00000428555 LRP6O75581 1613 aa13.7□□□□□ -0.22
TRIM39-208ENST00000428555 PNPLA6Q8IY17 1366 aa13.7□□□□□ -0.22
TRIM39-208ENST00000428555 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
TRIM39-208ENST00000428555 KRT28Q7Z3Y7 464 aa13.69□□□□□ -0.22
TRIM39-208ENST00000428555 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
TRIM39-208ENST00000428555 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
TRIM39-208ENST00000428555 ZNF772Q68DY9 489 aaPredicted RBP13.68□□□□□ -0.22
TRIM39-208ENST00000428555 PMFBP1Q8TBY8 1022 aa13.67□□□□□ -0.22
TRIM39-208ENST00000428555 C8orf37Q96NL8 207 aa13.67□□□□□ -0.22
TRIM39-208ENST00000428555 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
TRIM39-208ENST00000428555 WASLO00401 505 aaPredicted RBP13.66□□□□□ -0.22
TRIM39-208ENST00000428555 NGLY1Q96IV0 654 aa13.66□□□□□ -0.22
TRIM39-208ENST00000428555 AFF2P51816 1311 aa13.65□□□□□ -0.22
TRIM39-208ENST00000428555 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
TRIM39-208ENST00000428555 PSME1Q06323 249 aa13.65□□□□□ -0.22
TRIM39-208ENST00000428555 DLC1Q96QB1 1528 aa13.64□□□□□ -0.23
TRIM39-208ENST00000428555 LAMC1P11047 1609 aa13.64□□□□□ -0.23
TRIM39-208ENST00000428555 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
TRIM39-208ENST00000428555 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
TRIM39-208ENST00000428555 CDK19Q9BWU1 502 aa13.63□□□□□ -0.23
TRIM39-208ENST00000428555 QTRT2Q9H974 415 aaKnown RBP13.63□□□□□ -0.23
TRIM39-208ENST00000428555 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
TRIM39-208ENST00000428555 SHPRHQ149N8 1683 aa13.63□□□□□ -0.23
TRIM39-208ENST00000428555 PXDNQ92626 1479 aa13.62□□□□□ -0.23
TRIM39-208ENST00000428555 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
TRIM39-208ENST00000428555 RXRBP28702 533 aa13.62□□□□□ -0.23
TRIM39-208ENST00000428555 NUDT16Q96DE0 195 aaKnown RBP13.62□□□□□ -0.23
TRIM39-208ENST00000428555 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
TRIM39-208ENST00000428555 NGDNQ8NEJ9 315 aaKnown RBP13.6□□□□□ -0.23
TRIM39-208ENST00000428555 CABLES1Q8TDN4 633 aa13.6□□□□□ -0.23
TRIM39-208ENST00000428555 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
TRIM39-208ENST00000428555 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
TRIM39-208ENST00000428555 FNBP4Q8N3X1 1017 aaPredicted RBP13.59□□□□□ -0.23
TRIM39-208ENST00000428555 USP21Q9UK80 565 aa13.59□□□□□ -0.23
TRIM39-208ENST00000428555 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
TRIM39-208ENST00000428555 RBM6P78332 1123 aaKnown RBP13.57□□□□□ -0.24
TRIM39-208ENST00000428555 CENPJQ9HC77 1338 aaPredicted RBP13.57□□□□□ -0.24
TRIM39-208ENST00000428555 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
TRIM39-208ENST00000428555 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-208ENST00000428555 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
TRIM39-208ENST00000428555 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
TRIM39-208ENST00000428555 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
TRIM39-208ENST00000428555 PAK3O75914 559 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-208ENST00000428555 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
TRIM39-208ENST00000428555 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
TRIM39-208ENST00000428555 TRPC5Q9UL62 973 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-208ENST00000428555 TNS3Q68CZ2 1445 aa13.54□□□□□ -0.24
TRIM39-208ENST00000428555 PLEKHG3A1L390 1219 aa13.53□□□□□ -0.24
TRIM39-208ENST00000428555 ACEP12821 1306 aa13.53□□□□□ -0.24
TRIM39-208ENST00000428555 ROCK2O75116 1388 aaKnown RBP13.53□□□□□ -0.24
TRIM39-208ENST00000428555 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
TRIM39-208ENST00000428555 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
TRIM39-208ENST00000428555 ARHGEF10O15013 1369 aa13.52□□□□□ -0.25
TRIM39-208ENST00000428555 USP32Q8NFA0 1604 aa13.52□□□□□ -0.25
TRIM39-208ENST00000428555 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.25
TRIM39-208ENST00000428555 KIF1AQ12756 1690 aa13.51□□□□□ -0.25
TRIM39-208ENST00000428555 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
TRIM39-208ENST00000428555 FAM83GA6ND36 823 aa13.51□□□□□ -0.25
TRIM39-208ENST00000428555 UNC5CLQ8IV45 518 aa13.51□□□□□ -0.25
TRIM39-208ENST00000428555 CABP1Q9NZU7 370 aa13.51□□□□□ -0.25
TRIM39-208ENST00000428555 KIAA1210Q9ULL0 1709 aa13.5□□□□□ -0.25
TRIM39-208ENST00000428555 BCL9LQ86UU0 1499 aa13.5□□□□□ -0.25
TRIM39-208ENST00000428555 NUTM2GQ5VZR2 741 aa13.5□□□□□ -0.25
TRIM39-208ENST00000428555 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
TRIM39-208ENST00000428555 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
TRIM39-208ENST00000428555 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
TRIM39-208ENST00000428555 ATP7BP35670 1465 aa13.49□□□□□ -0.25
TRIM39-208ENST00000428555 GJD4Q96KN9 370 aaPredicted RBP13.49□□□□□ -0.25
TRIM39-208ENST00000428555 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
TRIM39-208ENST00000428555 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
TRIM39-208ENST00000428555 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRIM39-208ENST00000428555 ATRNO75882 1429 aa13.47□□□□□ -0.25
TRIM39-208ENST00000428555 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
TRIM39-208ENST00000428555 ABTB2Q8N961 1025 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms