RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 DLC1Q96QB1 1528 aa33.51■■■□□ 2.95
GLI3-202ENST00000428534 RGS17Q9UGC6 210 aaPredicted RBP33.5■■■□□ 2.95
GLI3-202ENST00000428534 POGKQ9P215 609 aa33.48■■■□□ 2.95
GLI3-202ENST00000428534 TRAK1Q9UPV9 953 aa33.48■■■□□ 2.95
GLI3-202ENST00000428534 WAPLQ7Z5K2 1190 aa33.46■■■□□ 2.95
GLI3-202ENST00000428534 SLAIN2Q9P270 581 aa33.45■■■□□ 2.95
GLI3-202ENST00000428534 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.45■■■□□ 2.94
GLI3-202ENST00000428534 NBPF1Q3BBV0 1214 aa33.44■■■□□ 2.94
GLI3-202ENST00000428534 PRAM1Q96QH2 718 aa33.44■■■□□ 2.94
GLI3-202ENST00000428534 PHLPP1O60346 1717 aa33.44■■■□□ 2.94
GLI3-202ENST00000428534 ROCK2O75116 1388 aaKnown RBP33.42■■■□□ 2.94
GLI3-202ENST00000428534 TRPM1Q7Z4N2 1603 aa33.4■■■□□ 2.94
GLI3-202ENST00000428534 NBPF8Q3BBV2 869 aa33.4■■■□□ 2.94
GLI3-202ENST00000428534 PLEKHH1Q9ULM0 1364 aa33.37■■■□□ 2.93
GLI3-202ENST00000428534 NALCNQ8IZF0 1738 aa33.37■■■□□ 2.93
GLI3-202ENST00000428534 GPRASP1Q5JY77 1395 aa33.34■■■□□ 2.93
GLI3-202ENST00000428534 COL16A1Q07092 1604 aaPredicted RBP33.33■■■□□ 2.93
GLI3-202ENST00000428534 CDC42BPGQ6DT37 1551 aa33.33■■■□□ 2.93
GLI3-202ENST00000428534 RALGAPBQ86X10 1494 aa33.32■■■□□ 2.92
GLI3-202ENST00000428534 EIF3AQ14152 1382 aaKnown RBP33.32■■■□□ 2.92
GLI3-202ENST00000428534 SAFB2Q14151 953 aaKnown RBP eCLIP33.31■■■□□ 2.92
GLI3-202ENST00000428534 CARD11Q9BXL7 1154 aa33.3■■■□□ 2.92
GLI3-202ENST00000428534 MST1RQ04912 1400 aa33.29■■■□□ 2.92
GLI3-202ENST00000428534 ARHGEF28Q8N1W1 1705 aaKnown RBP33.28■■■□□ 2.92
GLI3-202ENST00000428534 POTEAQ6S8J7 498 aa33.28■■■□□ 2.92
GLI3-202ENST00000428534 CENPJQ9HC77 1338 aaPredicted RBP33.27■■■□□ 2.92
GLI3-202ENST00000428534 JCADQ9P266 1359 aa33.25■■■□□ 2.91
GLI3-202ENST00000428534 C1orf167Q5SNV9 1468 aa33.24■■■□□ 2.91
GLI3-202ENST00000428534 MINK1Q8N4C8 1332 aaPredicted RBP33.23■■■□□ 2.91
GLI3-202ENST00000428534 ADGRB2O60241 1585 aa33.22■■■□□ 2.91
GLI3-202ENST00000428534 AHDC1Q5TGY3 1603 aaPredicted RBP33.21■■■□□ 2.91
GLI3-202ENST00000428534 WASLO00401 505 aaPredicted RBP33.2■■■□□ 2.91
GLI3-202ENST00000428534 BRINP3Q76B58 766 aa33.2■■■□□ 2.91
GLI3-202ENST00000428534 HIRIP3Q9BW71 556 aaPredicted RBP33.17■■■□□ 2.9
GLI3-202ENST00000428534 SLC24A1O60721 1099 aa33.16■■■□□ 2.9
GLI3-202ENST00000428534 LRP6O75581 1613 aa33.16■■■□□ 2.9
GLI3-202ENST00000428534 ESCO1Q5FWF5 840 aa33.15■■■□□ 2.9
GLI3-202ENST00000428534 ANKARQ7Z5J8 1434 aa33.15■■■□□ 2.9
GLI3-202ENST00000428534 FMN2Q9NZ56 1722 aa33.15■■■□□ 2.9
GLI3-202ENST00000428534 SHPRHQ149N8 1683 aa33.14■■■□□ 2.9
GLI3-202ENST00000428534 NUTM2FA1L443 756 aa33.11■■■□□ 2.89
GLI3-202ENST00000428534 ORAI2Q96SN7 254 aa33.11■■■□□ 2.89
GLI3-202ENST00000428534 CDK19Q9BWU1 502 aa33.09■■■□□ 2.89
GLI3-202ENST00000428534 SBNO2Q9Y2G9 1366 aa33.08■■■□□ 2.89
GLI3-202ENST00000428534 TULP4Q9NRJ4 1543 aa33.07■■■□□ 2.89
GLI3-202ENST00000428534 EVC2Q86UK5 1308 aa33.07■■■□□ 2.88
GLI3-202ENST00000428534 QRICH2Q9H0J4 1663 aa33.07■■■□□ 2.88
GLI3-202ENST00000428534 SPATA31A6Q5VVP1 1343 aa33.06■■■□□ 2.88
GLI3-202ENST00000428534 NPHP3Q7Z494 1330 aa33.06■■■□□ 2.88
GLI3-202ENST00000428534 PHF8Q9UPP1 1060 aa33.04■■■□□ 2.88
GLI3-202ENST00000428534 NHSL1Q5SYE7 1610 aa33.03■■■□□ 2.88
GLI3-202ENST00000428534 SRPK2P78362 688 aaKnown RBP33.03■■■□□ 2.88
GLI3-202ENST00000428534 NUDT16Q96DE0 195 aaKnown RBP33.02■■■□□ 2.88
GLI3-202ENST00000428534 KIF1AQ12756 1690 aa33.01■■■□□ 2.88
GLI3-202ENST00000428534 LRRC59Q96AG4 307 aaKnown RBP33.01■■■□□ 2.87
GLI3-202ENST00000428534 USP47Q96K76 1375 aa33■■■□□ 2.87
GLI3-202ENST00000428534 CCDC61Q9Y6R9 512 aa33■■■□□ 2.87
GLI3-202ENST00000428534 MEX3CQ5U5Q3 659 aaKnown RBP32.99■■■□□ 2.87
GLI3-202ENST00000428534 ST20-MTHFSA0A0A6YYL1 179 aa32.97■■■□□ 2.87
GLI3-202ENST00000428534 FOXO3O43524 673 aa32.97■■■□□ 2.87
GLI3-202ENST00000428534 SOS2Q07890 1332 aaPredicted RBP32.97■■■□□ 2.87
GLI3-202ENST00000428534 PRR36Q9H6K5 1346 aa32.96■■■□□ 2.87
GLI3-202ENST00000428534 PSME1Q06323 249 aa32.95■■■□□ 2.87
GLI3-202ENST00000428534 USP32Q8NFA0 1604 aa32.95■■■□□ 2.86
GLI3-202ENST00000428534 ATP7BP35670 1465 aa32.94■■■□□ 2.86
GLI3-202ENST00000428534 PUS7Q96PZ0 661 aaKnown RBP32.93■■■□□ 2.86
GLI3-202ENST00000428534 CABP2Q9NPB3 220 aa32.93■■■□□ 2.86
GLI3-202ENST00000428534 ITSN1Q15811 1721 aa32.93■■■□□ 2.86
GLI3-202ENST00000428534 NGDNQ8NEJ9 315 aaKnown RBP32.91■■■□□ 2.86
GLI3-202ENST00000428534 PMFBP1Q8TBY8 1022 aa32.91■■■□□ 2.86
GLI3-202ENST00000428534 RGPD8O14715 1765 aaPredicted RBP32.91■■■□□ 2.86
GLI3-202ENST00000428534 EIF4G2P78344 907 aaKnown RBP eCLIP32.9■■■□□ 2.86
GLI3-202ENST00000428534 DDX17Q92841 729 aaKnown RBP32.9■■■□□ 2.86
GLI3-202ENST00000428534 ATAD2Q6PL18 1390 aa32.9■■■□□ 2.86
GLI3-202ENST00000428534 PLEKHG3A1L390 1219 aa32.89■■■□□ 2.86
GLI3-202ENST00000428534 NUTM2BA6NNL0 878 aaPredicted RBP32.89■■■□□ 2.86
GLI3-202ENST00000428534 NUTM2EB1AL46 878 aaPredicted RBP32.89■■■□□ 2.86
GLI3-202ENST00000428534 ZNF772Q68DY9 489 aaPredicted RBP32.89■■■□□ 2.86
GLI3-202ENST00000428534 KRT28Q7Z3Y7 464 aa32.89■■■□□ 2.86
GLI3-202ENST00000428534 NUTM2AQ8IVF1 878 aaPredicted RBP32.89■■■□□ 2.86
GLI3-202ENST00000428534 TESK2Q96S53 571 aa32.88■■■□□ 2.85
GLI3-202ENST00000428534 TMF1P82094 1093 aa32.87■■■□□ 2.85
GLI3-202ENST00000428534 CDCA8Q53HL2 280 aa32.86■■■□□ 2.85
GLI3-202ENST00000428534 PXDNQ92626 1479 aa32.85■■■□□ 2.85
GLI3-202ENST00000428534 PPIP5K1Q6PFW1 1433 aa32.84■■■□□ 2.85
GLI3-202ENST00000428534 SBNO1A3KN83 1393 aa32.82■■■□□ 2.84
GLI3-202ENST00000428534 POLR3AO14802 1390 aaPredicted RBP32.82■■■□□ 2.84
GLI3-202ENST00000428534 TOPAZ1Q8N9V7 1692 aa32.81■■■□□ 2.84
GLI3-202ENST00000428534 CABP1Q9NZU7 370 aa32.8■■■□□ 2.84
GLI3-202ENST00000428534 PNPLA6Q8IY17 1366 aa32.8■■■□□ 2.84
GLI3-202ENST00000428534 ACEP12821 1306 aa32.79■■■□□ 2.84
GLI3-202ENST00000428534 XPCQ01831 940 aaPredicted RBP32.79■■■□□ 2.84
GLI3-202ENST00000428534 ZNF692Q9BU19 519 aaPredicted RBP32.78■■■□□ 2.84
GLI3-202ENST00000428534 BRD4O60885 1362 aaPredicted RBP32.78■■■□□ 2.84
GLI3-202ENST00000428534 AFF2P51816 1311 aa32.77■■■□□ 2.84
GLI3-202ENST00000428534 SPATA31A3Q5VYP0 1347 aa32.77■■■□□ 2.84
GLI3-202ENST00000428534 ARHGEF10O15013 1369 aa32.74■■■□□ 2.83
GLI3-202ENST00000428534 NINLQ9Y2I6 1382 aa32.74■■■□□ 2.83
GLI3-202ENST00000428534 TNS3Q68CZ2 1445 aa32.74■■■□□ 2.83
GLI3-202ENST00000428534 HSPA5P11021 654 aaKnown RBP32.73■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms