RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
GHDC-203ENST00000428494 FANCAO15360 1455 aa20.19■□□□□ 0.82
GHDC-203ENST00000428494 NOS1P29475 1434 aa20.19■□□□□ 0.82
GHDC-203ENST00000428494 MYOM2P54296 1465 aa20.18■□□□□ 0.82
GHDC-203ENST00000428494 UHRF1BP1LA0JNW5 1464 aa20.18■□□□□ 0.82
GHDC-203ENST00000428494 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
GHDC-203ENST00000428494 PDZRN3Q9UPQ7 1066 aa20.17■□□□□ 0.82
GHDC-203ENST00000428494 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
GHDC-203ENST00000428494 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
GHDC-203ENST00000428494 KIF1BO60333 1816 aa20.16■□□□□ 0.82
GHDC-203ENST00000428494 VIRMAQ69YN4 1812 aaKnown RBP20.16■□□□□ 0.82
GHDC-203ENST00000428494 MROH2AA6NES4 1674 aa20.16■□□□□ 0.82
GHDC-203ENST00000428494 MROH1Q8NDA8 1641 aa20.15■□□□□ 0.82
GHDC-203ENST00000428494 NUTM2DQ5VT03 806 aaPredicted RBP20.15■□□□□ 0.82
GHDC-203ENST00000428494 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
GHDC-203ENST00000428494 POGKQ9P215 609 aa20.15■□□□□ 0.82
GHDC-203ENST00000428494 NINLQ9Y2I6 1382 aa20.15■□□□□ 0.82
GHDC-203ENST00000428494 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.82
GHDC-203ENST00000428494 PMFBP1Q8TBY8 1022 aa20.14■□□□□ 0.82
GHDC-203ENST00000428494 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
GHDC-203ENST00000428494 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
GHDC-203ENST00000428494 ADGRL1O94910 1474 aa20.13■□□□□ 0.81
GHDC-203ENST00000428494 SBNO2Q9Y2G9 1366 aa20.13■□□□□ 0.81
GHDC-203ENST00000428494 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
GHDC-203ENST00000428494 BECN1Q14457 450 aa20.12■□□□□ 0.81
GHDC-203ENST00000428494 U2AF1L5P0DN76 240 aaPredicted RBP20.11■□□□□ 0.81
GHDC-203ENST00000428494 U2AF1Q01081 240 aaKnown RBP eCLIP20.11■□□□□ 0.81
GHDC-203ENST00000428494 C14orf93Q9H972 538 aaKnown RBP20.11■□□□□ 0.81
GHDC-203ENST00000428494 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
GHDC-203ENST00000428494 ARAP3Q8WWN8 1544 aa20.11■□□□□ 0.81
GHDC-203ENST00000428494 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
GHDC-203ENST00000428494 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
GHDC-203ENST00000428494 TSR2Q969E8 191 aaKnown RBP20.1■□□□□ 0.81
GHDC-203ENST00000428494 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
GHDC-203ENST00000428494 NEURL4Q96JN8 1562 aa20.1■□□□□ 0.81
GHDC-203ENST00000428494 GGT6Q6P531 493 aa20.1■□□□□ 0.81
GHDC-203ENST00000428494 EFCAB6Q5THR3 1501 aa20.1■□□□□ 0.81
GHDC-203ENST00000428494 PPRC1Q5VV67 1664 aaKnown RBP20.09■□□□□ 0.81
GHDC-203ENST00000428494 MYO3AQ8NEV4 1616 aa20.08■□□□□ 0.81
GHDC-203ENST00000428494 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
GHDC-203ENST00000428494 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.81
GHDC-203ENST00000428494 TBC1D2Q9BYX2 928 aa20.08■□□□□ 0.81
GHDC-203ENST00000428494 ANTXR1Q9H6X2 564 aa20.08■□□□□ 0.81
GHDC-203ENST00000428494 CFAP53Q96M91 514 aa20.08■□□□□ 0.8
GHDC-203ENST00000428494 RWDD1Q9H446 243 aaPredicted RBP20.08■□□□□ 0.8
GHDC-203ENST00000428494 ZNF518AQ6AHZ1 1483 aa20.07■□□□□ 0.8
GHDC-203ENST00000428494 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
GHDC-203ENST00000428494 UPF2Q9HAU5 1272 aaKnown RBP20.07■□□□□ 0.8
GHDC-203ENST00000428494 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
GHDC-203ENST00000428494 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
GHDC-203ENST00000428494 CABP2Q9NPB3 220 aa20.06■□□□□ 0.8
GHDC-203ENST00000428494 MYH16Q9H6N6 1097 aa20.05■□□□□ 0.8
GHDC-203ENST00000428494 QRICH2Q9H0J4 1663 aa20.04■□□□□ 0.8
GHDC-203ENST00000428494 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
GHDC-203ENST00000428494 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
GHDC-203ENST00000428494 ADGRB3O60242 1522 aa20.03■□□□□ 0.8
GHDC-203ENST00000428494 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
GHDC-203ENST00000428494 AAMPQ13685 434 aa20.03■□□□□ 0.8
GHDC-203ENST00000428494 DZIP1LQ8IYY4 767 aaKnown RBP20.03■□□□□ 0.8
GHDC-203ENST00000428494 ADGRB1O14514 1584 aa20.02■□□□□ 0.8
GHDC-203ENST00000428494 U2SURPO15042 1029 aaKnown RBP20.02■□□□□ 0.8
GHDC-203ENST00000428494 NPATQ14207 1427 aa20.02■□□□□ 0.8
GHDC-203ENST00000428494 KIDINS220Q9ULH0 1771 aa20.02■□□□□ 0.8
GHDC-203ENST00000428494 SETBP1Q9Y6X0 1596 aa20.01■□□□□ 0.79
GHDC-203ENST00000428494 ARXQ96QS3 562 aa20.01■□□□□ 0.79
GHDC-203ENST00000428494 SMC4Q9NTJ3 1288 aa20.01■□□□□ 0.79
GHDC-203ENST00000428494 TRIM27P14373 513 aa20■□□□□ 0.79
GHDC-203ENST00000428494 ZC3H13Q5T200 1668 aaKnown RBP19.99■□□□□ 0.79
GHDC-203ENST00000428494 MFAP1P55081 439 aaKnown RBP19.99■□□□□ 0.79
GHDC-203ENST00000428494 SSH1Q8WYL5 1049 aa19.99■□□□□ 0.79
GHDC-203ENST00000428494 GGNBP2Q9H3C7 697 aa19.99■□□□□ 0.79
GHDC-203ENST00000428494 EVC2Q86UK5 1308 aa19.98■□□□□ 0.79
GHDC-203ENST00000428494 ITPRIPQ8IWB1 547 aa19.98■□□□□ 0.79
GHDC-203ENST00000428494 STK26Q9P289 416 aa19.98■□□□□ 0.79
GHDC-203ENST00000428494 PPLO60437 1756 aa19.97■□□□□ 0.79
GHDC-203ENST00000428494 TRIM35Q9UPQ4 493 aa19.97■□□□□ 0.79
GHDC-203ENST00000428494 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
GHDC-203ENST00000428494 PLEKHF1Q96S99 279 aa19.96■□□□□ 0.79
GHDC-203ENST00000428494 C22orf23Q9BZE7 217 aa19.96■□□□□ 0.79
GHDC-203ENST00000428494 ANKRD36BQ8N2N9 1353 aa19.96■□□□□ 0.79
GHDC-203ENST00000428494 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
GHDC-203ENST00000428494 NOB1Q9ULX3 412 aaKnown RBP19.96■□□□□ 0.79
GHDC-203ENST00000428494 CD109Q6YHK3 1445 aa19.95■□□□□ 0.78
GHDC-203ENST00000428494 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
GHDC-203ENST00000428494 GZF1Q9H116 711 aaPredicted RBP19.95■□□□□ 0.78
GHDC-203ENST00000428494 TULP4Q9NRJ4 1543 aa19.94■□□□□ 0.78
GHDC-203ENST00000428494 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
GHDC-203ENST00000428494 ZMYM3Q14202 1370 aa19.93■□□□□ 0.78
GHDC-203ENST00000428494 ATF7IPQ6VMQ6 1270 aa19.93■□□□□ 0.78
GHDC-203ENST00000428494 FAM43AQ8N2R8 423 aa19.92■□□□□ 0.78
GHDC-203ENST00000428494 TMEM57Q8N5G2 664 aa19.92■□□□□ 0.78
GHDC-203ENST00000428494 USP32Q8NFA0 1604 aa19.92■□□□□ 0.78
GHDC-203ENST00000428494 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
GHDC-203ENST00000428494 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
GHDC-203ENST00000428494 RPGRIP1LQ68CZ1 1315 aa19.91■□□□□ 0.78
GHDC-203ENST00000428494 RIPK4P57078 832 aa19.91■□□□□ 0.78
GHDC-203ENST00000428494 DDX19BQ9UMR2 479 aa19.91■□□□□ 0.78
GHDC-203ENST00000428494 GLI2P10070 1586 aa19.9■□□□□ 0.78
GHDC-203ENST00000428494 HDAC1Q13547 482 aaPredicted RBP19.9■□□□□ 0.78
GHDC-203ENST00000428494 VGFO15240 615 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms