RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
VRK2-204ENST00000428021 PRAM1Q96QH2 718 aa24.15■■□□□ 1.46
VRK2-204ENST00000428021 COL16A1Q07092 1604 aaPredicted RBP24.14■■□□□ 1.46
VRK2-204ENST00000428021 KIAA1210Q9ULL0 1709 aa24.14■■□□□ 1.45
VRK2-204ENST00000428021 TRAK1Q9UPV9 953 aa24.14■■□□□ 1.45
VRK2-204ENST00000428021 MED1Q15648 1581 aaPredicted RBP24.12■■□□□ 1.45
VRK2-204ENST00000428021 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
VRK2-204ENST00000428021 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
VRK2-204ENST00000428021 NHSL1Q5SYE7 1610 aa24.1■■□□□ 1.45
VRK2-204ENST00000428021 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
VRK2-204ENST00000428021 NBPF1Q3BBV0 1214 aa24.1■■□□□ 1.45
VRK2-204ENST00000428021 PCGF6Q9BYE7 350 aa24.09■■□□□ 1.45
VRK2-204ENST00000428021 POGKQ9P215 609 aa24.09■■□□□ 1.45
VRK2-204ENST00000428021 DDX17Q92841 729 aaKnown RBP24.08■■□□□ 1.45
VRK2-204ENST00000428021 FMN2Q9NZ56 1722 aa24.07■■□□□ 1.44
VRK2-204ENST00000428021 ARHGEF28Q8N1W1 1705 aaKnown RBP24.06■■□□□ 1.44
VRK2-204ENST00000428021 JCADQ9P266 1359 aa24.05■■□□□ 1.44
VRK2-204ENST00000428021 NUTM2FA1L443 756 aa24.05■■□□□ 1.44
VRK2-204ENST00000428021 ESCO1Q5FWF5 840 aa24.03■■□□□ 1.44
VRK2-204ENST00000428021 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
VRK2-204ENST00000428021 TRPM1Q7Z4N2 1603 aa24.01■■□□□ 1.43
VRK2-204ENST00000428021 MINK1Q8N4C8 1332 aaPredicted RBP24.01■■□□□ 1.43
VRK2-204ENST00000428021 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
VRK2-204ENST00000428021 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
VRK2-204ENST00000428021 RGPD8O14715 1765 aaPredicted RBP24■■□□□ 1.43
VRK2-204ENST00000428021 SHPRHQ149N8 1683 aa23.99■■□□□ 1.43
VRK2-204ENST00000428021 SOS2Q07890 1332 aaPredicted RBP23.99■■□□□ 1.43
VRK2-204ENST00000428021 LRRC59Q96AG4 307 aaKnown RBP23.97■■□□□ 1.43
VRK2-204ENST00000428021 USP32Q8NFA0 1604 aa23.96■■□□□ 1.43
VRK2-204ENST00000428021 TONSLQ96HA7 1378 aa23.96■■□□□ 1.43
VRK2-204ENST00000428021 FOXO3O43524 673 aa23.95■■□□□ 1.42
VRK2-204ENST00000428021 ANKARQ7Z5J8 1434 aa23.94■■□□□ 1.42
VRK2-204ENST00000428021 SPATA31A6Q5VVP1 1343 aa23.94■■□□□ 1.42
VRK2-204ENST00000428021 NPHP3Q7Z494 1330 aa23.94■■□□□ 1.42
VRK2-204ENST00000428021 WASLO00401 505 aaPredicted RBP23.94■■□□□ 1.42
VRK2-204ENST00000428021 ILDR2Q71H61 639 aa23.93■■□□□ 1.42
VRK2-204ENST00000428021 PXDNQ92626 1479 aa23.93■■□□□ 1.42
VRK2-204ENST00000428021 KIF1AQ12756 1690 aa23.92■■□□□ 1.42
VRK2-204ENST00000428021 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
VRK2-204ENST00000428021 LRP6O75581 1613 aa23.92■■□□□ 1.42
VRK2-204ENST00000428021 PRR36Q9H6K5 1346 aa23.92■■□□□ 1.42
VRK2-204ENST00000428021 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
VRK2-204ENST00000428021 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
VRK2-204ENST00000428021 TULP4Q9NRJ4 1543 aa23.9■■□□□ 1.42
VRK2-204ENST00000428021 XPCQ01831 940 aaPredicted RBP23.9■■□□□ 1.42
VRK2-204ENST00000428021 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
VRK2-204ENST00000428021 RGS17Q9UGC6 210 aaPredicted RBP23.9■■□□□ 1.42
VRK2-204ENST00000428021 GPRASP1Q5JY77 1395 aa23.9■■□□□ 1.42
VRK2-204ENST00000428021 CENPJQ9HC77 1338 aaPredicted RBP23.88■■□□□ 1.41
VRK2-204ENST00000428021 EIF3AQ14152 1382 aaKnown RBP23.88■■□□□ 1.41
VRK2-204ENST00000428021 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
VRK2-204ENST00000428021 CDK19Q9BWU1 502 aa23.86■■□□□ 1.41
VRK2-204ENST00000428021 NUTM2BA6NNL0 878 aaPredicted RBP23.85■■□□□ 1.41
VRK2-204ENST00000428021 NUTM2EB1AL46 878 aaPredicted RBP23.85■■□□□ 1.41
VRK2-204ENST00000428021 NUTM2AQ8IVF1 878 aaPredicted RBP23.85■■□□□ 1.41
VRK2-204ENST00000428021 PMFBP1Q8TBY8 1022 aa23.85■■□□□ 1.41
VRK2-204ENST00000428021 RALGAPBQ86X10 1494 aa23.85■■□□□ 1.41
VRK2-204ENST00000428021 QRICH2Q9H0J4 1663 aa23.85■■□□□ 1.41
VRK2-204ENST00000428021 ATP7BP35670 1465 aa23.84■■□□□ 1.41
VRK2-204ENST00000428021 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
VRK2-204ENST00000428021 NUDT16Q96DE0 195 aaKnown RBP23.83■■□□□ 1.41
VRK2-204ENST00000428021 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
VRK2-204ENST00000428021 SPATA31A3Q5VYP0 1347 aa23.81■■□□□ 1.4
VRK2-204ENST00000428021 CARD11Q9BXL7 1154 aa23.8■■□□□ 1.4
VRK2-204ENST00000428021 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
VRK2-204ENST00000428021 PSME1Q06323 249 aa23.78■■□□□ 1.4
VRK2-204ENST00000428021 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
VRK2-204ENST00000428021 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
VRK2-204ENST00000428021 TOPAZ1Q8N9V7 1692 aa23.77■■□□□ 1.4
VRK2-204ENST00000428021 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
VRK2-204ENST00000428021 CCDC61Q9Y6R9 512 aa23.76■■□□□ 1.39
VRK2-204ENST00000428021 TNS3Q68CZ2 1445 aa23.76■■□□□ 1.39
VRK2-204ENST00000428021 CABP2Q9NPB3 220 aa23.75■■□□□ 1.39
VRK2-204ENST00000428021 TIMELESSQ9UNS1 1208 aa23.75■■□□□ 1.39
VRK2-204ENST00000428021 TRPM3Q9HCF6 1732 aaPredicted RBP23.75■■□□□ 1.39
VRK2-204ENST00000428021 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
VRK2-204ENST00000428021 NGDNQ8NEJ9 315 aaKnown RBP23.74■■□□□ 1.39
VRK2-204ENST00000428021 CCER1Q8TC90 406 aaPredicted RBP23.74■■□□□ 1.39
VRK2-204ENST00000428021 PLEKHG3A1L390 1219 aa23.73■■□□□ 1.39
VRK2-204ENST00000428021 ADAMTS2O95450 1211 aa23.73■■□□□ 1.39
VRK2-204ENST00000428021 POLR3AO14802 1390 aaPredicted RBP23.71■■□□□ 1.39
VRK2-204ENST00000428021 EVC2Q86UK5 1308 aa23.71■■□□□ 1.39
VRK2-204ENST00000428021 C8orf37Q96NL8 207 aa23.7■■□□□ 1.38
VRK2-204ENST00000428021 SBNO2Q9Y2G9 1366 aa23.69■■□□□ 1.38
VRK2-204ENST00000428021 ACEP12821 1306 aa23.69■■□□□ 1.38
VRK2-204ENST00000428021 AFF2P51816 1311 aa23.69■■□□□ 1.38
VRK2-204ENST00000428021 ALS2Q96Q42 1657 aa23.69■■□□□ 1.38
VRK2-204ENST00000428021 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
VRK2-204ENST00000428021 ARHGEF10O15013 1369 aa23.67■■□□□ 1.38
VRK2-204ENST00000428021 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
VRK2-204ENST00000428021 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
VRK2-204ENST00000428021 CABLES1Q8TDN4 633 aa23.66■■□□□ 1.38
VRK2-204ENST00000428021 MARF1Q9Y4F3 1742 aaKnown RBP23.66■■□□□ 1.38
VRK2-204ENST00000428021 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
VRK2-204ENST00000428021 CABP1Q9NZU7 370 aa23.65■■□□□ 1.38
VRK2-204ENST00000428021 ABCA3Q99758 1704 aa23.63■■□□□ 1.37
VRK2-204ENST00000428021 ST20-MTHFSA0A0A6YYL1 179 aa23.62■■□□□ 1.37
VRK2-204ENST00000428021 SOCS7O14512 581 aa23.62■■□□□ 1.37
VRK2-204ENST00000428021 PAK3O75914 559 aaPredicted RBP23.62■■□□□ 1.37
VRK2-204ENST00000428021 FNBP4Q8N3X1 1017 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms