RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRPM4-202ENST00000427978 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-202ENST00000427978 TRMT2AQ8IZ69 625 aaKnown RBP17.07■□□□□ 0.32
TRPM4-202ENST00000427978 EXOSC9Q06265 439 aaKnown RBP17.06■□□□□ 0.32
TRPM4-202ENST00000427978 PMFBP1Q8TBY8 1022 aa17.06■□□□□ 0.32
TRPM4-202ENST00000427978 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
TRPM4-202ENST00000427978 RWDD1Q9H446 243 aaPredicted RBP17.06■□□□□ 0.32
TRPM4-202ENST00000427978 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
TRPM4-202ENST00000427978 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
TRPM4-202ENST00000427978 EVC2Q86UK5 1308 aa17.04■□□□□ 0.32
TRPM4-202ENST00000427978 ABCC1P33527 1531 aa17.04■□□□□ 0.32
TRPM4-202ENST00000427978 PLXNC1O60486 1568 aa17.04■□□□□ 0.32
TRPM4-202ENST00000427978 MADDQ8WXG6 1647 aa17.04■□□□□ 0.32
TRPM4-202ENST00000427978 ZKSCAN2Q63HK3 967 aa17.03■□□□□ 0.32
TRPM4-202ENST00000427978 DZIP1LQ8IYY4 767 aaKnown RBP17.03■□□□□ 0.32
TRPM4-202ENST00000427978 INSRP06213 1382 aa17.01■□□□□ 0.31
TRPM4-202ENST00000427978 ZCCHC11Q5TAX3 1644 aaKnown RBP17.01■□□□□ 0.31
TRPM4-202ENST00000427978 RIPK4P57078 832 aa17.01■□□□□ 0.31
TRPM4-202ENST00000427978 MLECQ14165 292 aa17.01■□□□□ 0.31
TRPM4-202ENST00000427978 C14orf93Q9H972 538 aaKnown RBP17.01■□□□□ 0.31
TRPM4-202ENST00000427978 TRPM2O94759 1503 aa17■□□□□ 0.31
TRPM4-202ENST00000427978 PTPRTO14522 1441 aa16.99■□□□□ 0.31
TRPM4-202ENST00000427978 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
TRPM4-202ENST00000427978 HMOX1P09601 288 aa16.99■□□□□ 0.31
TRPM4-202ENST00000427978 SYNMO15061 1565 aa16.99■□□□□ 0.31
TRPM4-202ENST00000427978 FOXD4L1Q9NU39 408 aa16.99■□□□□ 0.31
TRPM4-202ENST00000427978 ATP7AQ04656 1500 aa16.98■□□□□ 0.31
TRPM4-202ENST00000427978 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
TRPM4-202ENST00000427978 THUMPD2Q9BTF0 503 aaKnown RBP16.98■□□□□ 0.31
TRPM4-202ENST00000427978 NOB1Q9ULX3 412 aaKnown RBP16.98■□□□□ 0.31
TRPM4-202ENST00000427978 SSH1Q8WYL5 1049 aa16.98■□□□□ 0.31
TRPM4-202ENST00000427978 LNPKQ9C0E8 428 aa16.98■□□□□ 0.31
TRPM4-202ENST00000427978 POLR3AO14802 1390 aaPredicted RBP16.97■□□□□ 0.31
TRPM4-202ENST00000427978 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
TRPM4-202ENST00000427978 ZFYVE16Q7Z3T8 1539 aa16.97■□□□□ 0.31
TRPM4-202ENST00000427978 MVPQ14764 893 aaKnown RBP16.97■□□□□ 0.31
TRPM4-202ENST00000427978 WDR63Q8IWG1 891 aa16.97■□□□□ 0.31
TRPM4-202ENST00000427978 C1orf115Q9H7X2 142 aa16.97■□□□□ 0.31
TRPM4-202ENST00000427978 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.31
TRPM4-202ENST00000427978 IDI1Q13907 227 aa16.96■□□□□ 0.31
TRPM4-202ENST00000427978 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
TRPM4-202ENST00000427978 SOX12O15370 315 aa16.96■□□□□ 0.31
TRPM4-202ENST00000427978 HSP90AA1P07900 732 aaKnown RBP16.96■□□□□ 0.31
TRPM4-202ENST00000427978 LAMC1P11047 1609 aa16.96■□□□□ 0.3
TRPM4-202ENST00000427978 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
TRPM4-202ENST00000427978 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
TRPM4-202ENST00000427978 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
TRPM4-202ENST00000427978 TRIM27P14373 513 aa16.95■□□□□ 0.3
TRPM4-202ENST00000427978 USP19O94966 1318 aa16.94■□□□□ 0.3
TRPM4-202ENST00000427978 ASXL2Q76L83 1435 aa16.94■□□□□ 0.3
TRPM4-202ENST00000427978 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
TRPM4-202ENST00000427978 TBC1D2Q9BYX2 928 aa16.93■□□□□ 0.3
TRPM4-202ENST00000427978 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
TRPM4-202ENST00000427978 SPHKAPQ2M3C7 1700 aa16.93■□□□□ 0.3
TRPM4-202ENST00000427978 APBB1O00213 710 aa16.93■□□□□ 0.3
TRPM4-202ENST00000427978 RNF17Q9BXT8 1623 aaKnown RBP16.92■□□□□ 0.3
TRPM4-202ENST00000427978 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
TRPM4-202ENST00000427978 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
TRPM4-202ENST00000427978 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
TRPM4-202ENST00000427978 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
TRPM4-202ENST00000427978 C22orf23Q9BZE7 217 aa16.92■□□□□ 0.3
TRPM4-202ENST00000427978 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
TRPM4-202ENST00000427978 FBXO31Q5XUX0 539 aaPredicted RBP16.91■□□□□ 0.3
TRPM4-202ENST00000427978 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
TRPM4-202ENST00000427978 PRKAR2BP31323 418 aa16.9■□□□□ 0.3
TRPM4-202ENST00000427978 ATF7IPQ6VMQ6 1270 aa16.9■□□□□ 0.3
TRPM4-202ENST00000427978 ANKRD45Q5TZF3 282 aa16.89■□□□□ 0.29
TRPM4-202ENST00000427978 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
TRPM4-202ENST00000427978 NPATQ14207 1427 aa16.89■□□□□ 0.29
TRPM4-202ENST00000427978 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
TRPM4-202ENST00000427978 ABCA6Q8N139 1617 aa16.89■□□□□ 0.29
TRPM4-202ENST00000427978 FYB1O15117 783 aa16.88■□□□□ 0.29
TRPM4-202ENST00000427978 HSCBQ8IWL3 235 aa16.87■□□□□ 0.29
TRPM4-202ENST00000427978 TBC1D32Q96NH3 1257 aa16.87■□□□□ 0.29
TRPM4-202ENST00000427978 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
TRPM4-202ENST00000427978 CDK19Q9BWU1 502 aa16.87■□□□□ 0.29
TRPM4-202ENST00000427978 A0A1W2PP64 1363 aa16.86■□□□□ 0.29
TRPM4-202ENST00000427978 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
TRPM4-202ENST00000427978 IPO8O15397 1037 aaKnown RBP16.86■□□□□ 0.29
TRPM4-202ENST00000427978 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
TRPM4-202ENST00000427978 TET3O43151 1660 aa16.85■□□□□ 0.29
TRPM4-202ENST00000427978 HSP90AB1P08238 724 aaKnown RBP16.85■□□□□ 0.29
TRPM4-202ENST00000427978 NINLQ9Y2I6 1382 aa16.85■□□□□ 0.29
TRPM4-202ENST00000427978 CEP152O94986 1710 aa16.84■□□□□ 0.29
TRPM4-202ENST00000427978 MYOM1P52179 1685 aa16.84■□□□□ 0.29
TRPM4-202ENST00000427978 ANKRD36BQ8N2N9 1353 aa16.83■□□□□ 0.28
TRPM4-202ENST00000427978 DCTN1Q14203 1278 aa16.83■□□□□ 0.28
TRPM4-202ENST00000427978 ZRANB1Q9UGI0 708 aa16.83■□□□□ 0.28
TRPM4-202ENST00000427978 SHROOM2Q13796 1616 aa16.83■□□□□ 0.28
TRPM4-202ENST00000427978 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
TRPM4-202ENST00000427978 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
TRPM4-202ENST00000427978 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
TRPM4-202ENST00000427978 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
TRPM4-202ENST00000427978 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
TRPM4-202ENST00000427978 MYOM2P54296 1465 aa16.81■□□□□ 0.28
TRPM4-202ENST00000427978 KIF1BO60333 1816 aa16.81■□□□□ 0.28
TRPM4-202ENST00000427978 CCDC27Q2M243 656 aa16.8■□□□□ 0.28
TRPM4-202ENST00000427978 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
TRPM4-202ENST00000427978 NCKAP5LQ9HCH0 1330 aa16.8■□□□□ 0.28
TRPM4-202ENST00000427978 TSPYL6Q8N831 410 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms