RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PLEKHH1Q9ULM0 1364 aa27.07■■□□□ 1.92
PSPC1-202ENST00000427943 ORAI2Q96SN7 254 aa27.06■■□□□ 1.92
PSPC1-202ENST00000427943 FMN2Q9NZ56 1722 aa27.06■■□□□ 1.92
PSPC1-202ENST00000427943 POTEAQ6S8J7 498 aa27.05■■□□□ 1.92
PSPC1-202ENST00000427943 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
PSPC1-202ENST00000427943 MEX3CQ5U5Q3 659 aaKnown RBP27.03■■□□□ 1.92
PSPC1-202ENST00000427943 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
PSPC1-202ENST00000427943 NUTM2BA6NNL0 878 aaPredicted RBP27.01■■□□□ 1.91
PSPC1-202ENST00000427943 NUTM2EB1AL46 878 aaPredicted RBP27.01■■□□□ 1.91
PSPC1-202ENST00000427943 NUTM2AQ8IVF1 878 aaPredicted RBP27.01■■□□□ 1.91
PSPC1-202ENST00000427943 RGPD8O14715 1765 aaPredicted RBP27■■□□□ 1.91
PSPC1-202ENST00000427943 LRRC59Q96AG4 307 aaKnown RBP27■■□□□ 1.91
PSPC1-202ENST00000427943 PNPLA6Q8IY17 1366 aa26.99■■□□□ 1.91
PSPC1-202ENST00000427943 DHX57Q6P158 1386 aaKnown RBP26.98■■□□□ 1.91
PSPC1-202ENST00000427943 ADGRB1O14514 1584 aa26.98■■□□□ 1.91
PSPC1-202ENST00000427943 NUTM2FA1L443 756 aa26.97■■□□□ 1.91
PSPC1-202ENST00000427943 KDM2AQ9Y2K7 1162 aa26.97■■□□□ 1.91
PSPC1-202ENST00000427943 ESCO1Q5FWF5 840 aa26.95■■□□□ 1.9
PSPC1-202ENST00000427943 DCAF11Q8TEB1 546 aa26.95■■□□□ 1.9
PSPC1-202ENST00000427943 DLC1Q96QB1 1528 aa26.95■■□□□ 1.9
PSPC1-202ENST00000427943 KIF1AQ12756 1690 aa26.94■■□□□ 1.9
PSPC1-202ENST00000427943 SOS2Q07890 1332 aaPredicted RBP26.93■■□□□ 1.9
PSPC1-202ENST00000427943 COL22A1Q8NFW1 1626 aaPredicted RBP26.91■■□□□ 1.9
PSPC1-202ENST00000427943 PXDNQ92626 1479 aa26.91■■□□□ 1.9
PSPC1-202ENST00000427943 SAFB2Q14151 953 aaKnown RBP eCLIP26.9■■□□□ 1.9
PSPC1-202ENST00000427943 SIRT1Q96EB6 747 aa26.9■■□□□ 1.9
PSPC1-202ENST00000427943 PRAM1Q96QH2 718 aa26.89■■□□□ 1.9
PSPC1-202ENST00000427943 NPHP3Q7Z494 1330 aa26.89■■□□□ 1.89
PSPC1-202ENST00000427943 ADGRB2O60241 1585 aa26.88■■□□□ 1.89
PSPC1-202ENST00000427943 ARHGEF28Q8N1W1 1705 aaKnown RBP26.87■■□□□ 1.89
PSPC1-202ENST00000427943 XPCQ01831 940 aaPredicted RBP26.87■■□□□ 1.89
PSPC1-202ENST00000427943 ZNF772Q68DY9 489 aaPredicted RBP26.87■■□□□ 1.89
PSPC1-202ENST00000427943 FOXO3O43524 673 aa26.86■■□□□ 1.89
PSPC1-202ENST00000427943 USP32Q8NFA0 1604 aa26.86■■□□□ 1.89
PSPC1-202ENST00000427943 TRAK1Q9UPV9 953 aa26.85■■□□□ 1.89
PSPC1-202ENST00000427943 AFF2P51816 1311 aa26.85■■□□□ 1.89
PSPC1-202ENST00000427943 MARF1Q9Y4F3 1742 aaKnown RBP26.85■■□□□ 1.89
PSPC1-202ENST00000427943 C8orf37Q96NL8 207 aa26.84■■□□□ 1.89
PSPC1-202ENST00000427943 POGKQ9P215 609 aa26.84■■□□□ 1.89
PSPC1-202ENST00000427943 KIAA1210Q9ULL0 1709 aa26.82■■□□□ 1.88
PSPC1-202ENST00000427943 ADAMTS2O95450 1211 aa26.81■■□□□ 1.88
PSPC1-202ENST00000427943 STAC3Q96MF2 364 aa26.81■■□□□ 1.88
PSPC1-202ENST00000427943 HIRIP3Q9BW71 556 aaPredicted RBP26.77■■□□□ 1.88
PSPC1-202ENST00000427943 MINK1Q8N4C8 1332 aaPredicted RBP26.76■■□□□ 1.87
PSPC1-202ENST00000427943 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
PSPC1-202ENST00000427943 PHF8Q9UPP1 1060 aa26.74■■□□□ 1.87
PSPC1-202ENST00000427943 NGLY1Q96IV0 654 aa26.73■■□□□ 1.87
PSPC1-202ENST00000427943 TULP4Q9NRJ4 1543 aa26.73■■□□□ 1.87
PSPC1-202ENST00000427943 RXRBP28702 533 aa26.72■■□□□ 1.87
PSPC1-202ENST00000427943 ABCA3Q99758 1704 aa26.72■■□□□ 1.87
PSPC1-202ENST00000427943 ITSN1Q15811 1721 aa26.71■■□□□ 1.87
PSPC1-202ENST00000427943 KRT28Q7Z3Y7 464 aa26.71■■□□□ 1.87
PSPC1-202ENST00000427943 SPATA31A3Q5VYP0 1347 aa26.7■■□□□ 1.87
PSPC1-202ENST00000427943 TNS3Q68CZ2 1445 aa26.69■■□□□ 1.86
PSPC1-202ENST00000427943 TRPM3Q9HCF6 1732 aaPredicted RBP26.69■■□□□ 1.86
PSPC1-202ENST00000427943 CDK12Q9NYV4 1490 aaPredicted RBP26.68■■□□□ 1.86
PSPC1-202ENST00000427943 PMFBP1Q8TBY8 1022 aa26.68■■□□□ 1.86
PSPC1-202ENST00000427943 QTRT2Q9H974 415 aaKnown RBP26.67■■□□□ 1.86
PSPC1-202ENST00000427943 EIF3AQ14152 1382 aaKnown RBP26.67■■□□□ 1.86
PSPC1-202ENST00000427943 PRR36Q9H6K5 1346 aa26.66■■□□□ 1.86
PSPC1-202ENST00000427943 RGS12O14924 1447 aa26.65■■□□□ 1.86
PSPC1-202ENST00000427943 WASLO00401 505 aaPredicted RBP26.65■■□□□ 1.86
PSPC1-202ENST00000427943 USP21Q9UK80 565 aa26.65■■□□□ 1.86
PSPC1-202ENST00000427943 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.63■■□□□ 1.85
PSPC1-202ENST00000427943 PSME1Q06323 249 aa26.63■■□□□ 1.85
PSPC1-202ENST00000427943 NBPF1Q3BBV0 1214 aa26.63■■□□□ 1.85
PSPC1-202ENST00000427943 SIN3AQ96ST3 1273 aa26.63■■□□□ 1.85
PSPC1-202ENST00000427943 ALS2Q96Q42 1657 aa26.63■■□□□ 1.85
PSPC1-202ENST00000427943 ATP7BP35670 1465 aa26.62■■□□□ 1.85
PSPC1-202ENST00000427943 SBNO1A3KN83 1393 aa26.62■■□□□ 1.85
PSPC1-202ENST00000427943 PLEKHG5O94827 1062 aa26.62■■□□□ 1.85
PSPC1-202ENST00000427943 TOPAZ1Q8N9V7 1692 aa26.62■■□□□ 1.85
PSPC1-202ENST00000427943 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
PSPC1-202ENST00000427943 QRICH2Q9H0J4 1663 aa26.61■■□□□ 1.85
PSPC1-202ENST00000427943 RBM6P78332 1123 aaKnown RBP26.61■■□□□ 1.85
PSPC1-202ENST00000427943 FNBP4Q8N3X1 1017 aaPredicted RBP26.61■■□□□ 1.85
PSPC1-202ENST00000427943 PLCH1Q4KWH8 1693 aa26.6■■□□□ 1.85
PSPC1-202ENST00000427943 ATRNO75882 1429 aa26.59■■□□□ 1.85
PSPC1-202ENST00000427943 LMOD2Q6P5Q4 547 aa26.59■■□□□ 1.85
PSPC1-202ENST00000427943 L3MBTL2Q969R5 705 aa26.59■■□□□ 1.85
PSPC1-202ENST00000427943 BCL9LQ86UU0 1499 aa26.57■■□□□ 1.84
PSPC1-202ENST00000427943 NEUROD1Q13562 356 aa26.57■■□□□ 1.84
PSPC1-202ENST00000427943 CABLES1Q8TDN4 633 aa26.57■■□□□ 1.84
PSPC1-202ENST00000427943 TRPC5Q9UL62 973 aaPredicted RBP26.57■■□□□ 1.84
PSPC1-202ENST00000427943 ARHGEF10O15013 1369 aa26.57■■□□□ 1.84
PSPC1-202ENST00000427943 HAP1P54257 671 aaPredicted RBP26.56■■□□□ 1.84
PSPC1-202ENST00000427943 CRYBG1Q9Y4K1 1723 aa26.56■■□□□ 1.84
PSPC1-202ENST00000427943 GPRASP1Q5JY77 1395 aa26.55■■□□□ 1.84
PSPC1-202ENST00000427943 NWD2Q9ULI1 1742 aa26.53■■□□□ 1.84
PSPC1-202ENST00000427943 SLIT2O94813 1529 aa26.53■■□□□ 1.84
PSPC1-202ENST00000427943 NGDNQ8NEJ9 315 aaKnown RBP26.52■■□□□ 1.84
PSPC1-202ENST00000427943 NUDT16Q96DE0 195 aaKnown RBP26.52■■□□□ 1.84
PSPC1-202ENST00000427943 CDK19Q9BWU1 502 aa26.52■■□□□ 1.84
PSPC1-202ENST00000427943 UPF1Q92900 1129 aaKnown RBP eCLIP26.51■■□□□ 1.83
PSPC1-202ENST00000427943 GLI3P10071 1580 aa26.5■■□□□ 1.83
PSPC1-202ENST00000427943 CENPJQ9HC77 1338 aaPredicted RBP26.49■■□□□ 1.83
PSPC1-202ENST00000427943 PHRF1Q9P1Y6 1649 aaKnown RBP26.47■■□□□ 1.83
PSPC1-202ENST00000427943 NRAPQ86VF7 1730 aa26.47■■□□□ 1.83
PSPC1-202ENST00000427943 PAK3O75914 559 aaPredicted RBP26.46■■□□□ 1.83
PSPC1-202ENST00000427943 UNC5CLQ8IV45 518 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms