RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 ORAI2Q96SN7 254 aa22.15■■□□□ 1.14
PHF1-204ENST00000427826 DCAF11Q8TEB1 546 aa22.14■■□□□ 1.13
PHF1-204ENST00000427826 NHSL1Q5SYE7 1610 aa22.13■■□□□ 1.13
PHF1-204ENST00000427826 DDX17Q92841 729 aaKnown RBP22.13■■□□□ 1.13
PHF1-204ENST00000427826 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
PHF1-204ENST00000427826 SHPRHQ149N8 1683 aa22.13■■□□□ 1.13
PHF1-204ENST00000427826 LAMC1P11047 1609 aa22.13■■□□□ 1.13
PHF1-204ENST00000427826 CDC42BPGQ6DT37 1551 aa22.12■■□□□ 1.13
PHF1-204ENST00000427826 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
PHF1-204ENST00000427826 ESCO1Q5FWF5 840 aa22.11■■□□□ 1.13
PHF1-204ENST00000427826 POTEAQ6S8J7 498 aa22.11■■□□□ 1.13
PHF1-204ENST00000427826 PLEKHH1Q9ULM0 1364 aa22.11■■□□□ 1.13
PHF1-204ENST00000427826 SOS2Q07890 1332 aaPredicted RBP22.09■■□□□ 1.13
PHF1-204ENST00000427826 NUTM2BA6NNL0 878 aaPredicted RBP22.09■■□□□ 1.13
PHF1-204ENST00000427826 NUTM2EB1AL46 878 aaPredicted RBP22.09■■□□□ 1.13
PHF1-204ENST00000427826 NUTM2AQ8IVF1 878 aaPredicted RBP22.09■■□□□ 1.13
PHF1-204ENST00000427826 LRP6O75581 1613 aa22.09■■□□□ 1.13
PHF1-204ENST00000427826 ZNF772Q68DY9 489 aaPredicted RBP22.08■■□□□ 1.13
PHF1-204ENST00000427826 NPHP3Q7Z494 1330 aa22.07■■□□□ 1.12
PHF1-204ENST00000427826 PNPLA6Q8IY17 1366 aa22.07■■□□□ 1.12
PHF1-204ENST00000427826 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
PHF1-204ENST00000427826 POGKQ9P215 609 aa22.06■■□□□ 1.12
PHF1-204ENST00000427826 NUTM2FA1L443 756 aa22.04■■□□□ 1.12
PHF1-204ENST00000427826 DLC1Q96QB1 1528 aa22.03■■□□□ 1.12
PHF1-204ENST00000427826 FOXO3O43524 673 aa22.02■■□□□ 1.12
PHF1-204ENST00000427826 TRAK1Q9UPV9 953 aa22.02■■□□□ 1.12
PHF1-204ENST00000427826 ADGRB1O14514 1584 aa22.01■■□□□ 1.11
PHF1-204ENST00000427826 SAFB2Q14151 953 aaKnown RBP eCLIP22.01■■□□□ 1.11
PHF1-204ENST00000427826 C8orf37Q96NL8 207 aa21.97■■□□□ 1.11
PHF1-204ENST00000427826 AFF2P51816 1311 aa21.97■■□□□ 1.11
PHF1-204ENST00000427826 FMN2Q9NZ56 1722 aa21.97■■□□□ 1.11
PHF1-204ENST00000427826 PHF8Q9UPP1 1060 aa21.96■■□□□ 1.11
PHF1-204ENST00000427826 PXDNQ92626 1479 aa21.96■■□□□ 1.11
PHF1-204ENST00000427826 XPCQ01831 940 aaPredicted RBP21.95■■□□□ 1.1
PHF1-204ENST00000427826 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
PHF1-204ENST00000427826 RXRBP28702 533 aa21.94■■□□□ 1.1
PHF1-204ENST00000427826 PSME1Q06323 249 aa21.94■■□□□ 1.1
PHF1-204ENST00000427826 NGLY1Q96IV0 654 aa21.94■■□□□ 1.1
PHF1-204ENST00000427826 EIF3AQ14152 1382 aaKnown RBP21.93■■□□□ 1.1
PHF1-204ENST00000427826 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
PHF1-204ENST00000427826 KIF1AQ12756 1690 aa21.92■■□□□ 1.1
PHF1-204ENST00000427826 ANKARQ7Z5J8 1434 aa21.92■■□□□ 1.1
PHF1-204ENST00000427826 MINK1Q8N4C8 1332 aaPredicted RBP21.91■■□□□ 1.1
PHF1-204ENST00000427826 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
PHF1-204ENST00000427826 SPATA31A3Q5VYP0 1347 aa21.9■■□□□ 1.1
PHF1-204ENST00000427826 WASLO00401 505 aaPredicted RBP21.9■■□□□ 1.1
PHF1-204ENST00000427826 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
PHF1-204ENST00000427826 COL22A1Q8NFW1 1626 aaPredicted RBP21.89■■□□□ 1.09
PHF1-204ENST00000427826 QTRT2Q9H974 415 aaKnown RBP21.89■■□□□ 1.09
PHF1-204ENST00000427826 FNBP4Q8N3X1 1017 aaPredicted RBP21.86■■□□□ 1.09
PHF1-204ENST00000427826 USP21Q9UK80 565 aa21.86■■□□□ 1.09
PHF1-204ENST00000427826 SBNO1A3KN83 1393 aa21.86■■□□□ 1.09
PHF1-204ENST00000427826 RBM6P78332 1123 aaKnown RBP21.85■■□□□ 1.09
PHF1-204ENST00000427826 PMFBP1Q8TBY8 1022 aa21.85■■□□□ 1.09
PHF1-204ENST00000427826 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
PHF1-204ENST00000427826 KIAA1210Q9ULL0 1709 aa21.85■■□□□ 1.09
PHF1-204ENST00000427826 CDK12Q9NYV4 1490 aaPredicted RBP21.84■■□□□ 1.09
PHF1-204ENST00000427826 NBPF1Q3BBV0 1214 aa21.83■■□□□ 1.09
PHF1-204ENST00000427826 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
PHF1-204ENST00000427826 TRPC5Q9UL62 973 aaPredicted RBP21.83■■□□□ 1.09
PHF1-204ENST00000427826 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.09
PHF1-204ENST00000427826 TNS3Q68CZ2 1445 aa21.82■■□□□ 1.08
PHF1-204ENST00000427826 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
PHF1-204ENST00000427826 ARHGEF10O15013 1369 aa21.82■■□□□ 1.08
PHF1-204ENST00000427826 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
PHF1-204ENST00000427826 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
PHF1-204ENST00000427826 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
PHF1-204ENST00000427826 HAP1P54257 671 aaPredicted RBP21.8■■□□□ 1.08
PHF1-204ENST00000427826 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
PHF1-204ENST00000427826 LMOD2Q6P5Q4 547 aa21.8■■□□□ 1.08
PHF1-204ENST00000427826 NGDNQ8NEJ9 315 aaKnown RBP21.8■■□□□ 1.08
PHF1-204ENST00000427826 ARHGEF28Q8N1W1 1705 aaKnown RBP21.8■■□□□ 1.08
PHF1-204ENST00000427826 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
PHF1-204ENST00000427826 NUDT16Q96DE0 195 aaKnown RBP21.79■■□□□ 1.08
PHF1-204ENST00000427826 CDK19Q9BWU1 502 aa21.79■■□□□ 1.08
PHF1-204ENST00000427826 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
PHF1-204ENST00000427826 CCDC61Q9Y6R9 512 aa21.74■■□□□ 1.07
PHF1-204ENST00000427826 ATRNO75882 1429 aa21.73■■□□□ 1.07
PHF1-204ENST00000427826 BCL9LQ86UU0 1499 aa21.73■■□□□ 1.07
PHF1-204ENST00000427826 CABLES1Q8TDN4 633 aa21.73■■□□□ 1.07
PHF1-204ENST00000427826 ATP7BP35670 1465 aa21.72■■□□□ 1.07
PHF1-204ENST00000427826 UNC5CLQ8IV45 518 aa21.72■■□□□ 1.07
PHF1-204ENST00000427826 PAK3O75914 559 aaPredicted RBP21.71■■□□□ 1.07
PHF1-204ENST00000427826 RGS12O14924 1447 aa21.71■■□□□ 1.07
PHF1-204ENST00000427826 MARF1Q9Y4F3 1742 aaKnown RBP21.7■■□□□ 1.06
PHF1-204ENST00000427826 PLEKHG5O94827 1062 aa21.7■■□□□ 1.06
PHF1-204ENST00000427826 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
PHF1-204ENST00000427826 UPF1Q92900 1129 aaKnown RBP eCLIP21.7■■□□□ 1.061e-7■■□□□ 12.8
PHF1-204ENST00000427826 PLEKHG3A1L390 1219 aa21.69■■□□□ 1.06
PHF1-204ENST00000427826 GJD4Q96KN9 370 aaPredicted RBP21.69■■□□□ 1.06
PHF1-204ENST00000427826 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
PHF1-204ENST00000427826 SLIT2O94813 1529 aa21.69■■□□□ 1.06
PHF1-204ENST00000427826 ITSN1Q15811 1721 aa21.68■■□□□ 1.06
PHF1-204ENST00000427826 POLR3AO14802 1390 aaPredicted RBP21.67■■□□□ 1.06
PHF1-204ENST00000427826 NBPF8Q3BBV2 869 aa21.67■■□□□ 1.06
PHF1-204ENST00000427826 TRPM3Q9HCF6 1732 aaPredicted RBP21.66■■□□□ 1.06
PHF1-204ENST00000427826 ACEP12821 1306 aa21.66■■□□□ 1.06
PHF1-204ENST00000427826 TONSLQ96HA7 1378 aa21.64■■□□□ 1.06
PHF1-204ENST00000427826 FAM83GA6ND36 823 aa21.64■■□□□ 1.05
PHF1-204ENST00000427826 CABP2Q9NPB3 220 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms