RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 COL16A1Q07092 1604 aaPredicted RBP22.57■■□□□ 1.2
CLK3P2-201ENST00000427566 TONSLQ96HA7 1378 aa22.57■■□□□ 1.2
CLK3P2-201ENST00000427566 ADGRB1O14514 1584 aa22.57■■□□□ 1.2
CLK3P2-201ENST00000427566 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
CLK3P2-201ENST00000427566 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
CLK3P2-201ENST00000427566 AHDC1Q5TGY3 1603 aaPredicted RBP22.56■■□□□ 1.2
CLK3P2-201ENST00000427566 NUTM2FA1L443 756 aa22.55■■□□□ 1.2
CLK3P2-201ENST00000427566 POGKQ9P215 609 aa22.55■■□□□ 1.2
CLK3P2-201ENST00000427566 NHSL1Q5SYE7 1610 aa22.55■■□□□ 1.2
CLK3P2-201ENST00000427566 C1orf167Q5SNV9 1468 aa22.55■■□□□ 1.2
CLK3P2-201ENST00000427566 PRAM1Q96QH2 718 aa22.54■■□□□ 1.2
CLK3P2-201ENST00000427566 CLSPNQ9HAW4 1339 aa22.54■■□□□ 1.2
CLK3P2-201ENST00000427566 NBPF1Q3BBV0 1214 aa22.54■■□□□ 1.2
CLK3P2-201ENST00000427566 NBPF8Q3BBV2 869 aa22.54■■□□□ 1.2
CLK3P2-201ENST00000427566 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
CLK3P2-201ENST00000427566 RGPD8O14715 1765 aaPredicted RBP22.53■■□□□ 1.2
CLK3P2-201ENST00000427566 FMN2Q9NZ56 1722 aa22.53■■□□□ 1.2
CLK3P2-201ENST00000427566 DLC1Q96QB1 1528 aa22.52■■□□□ 1.2
CLK3P2-201ENST00000427566 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
CLK3P2-201ENST00000427566 ORAI2Q96SN7 254 aa22.52■■□□□ 1.2
CLK3P2-201ENST00000427566 SIRT1Q96EB6 747 aa22.51■■□□□ 1.19
CLK3P2-201ENST00000427566 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
CLK3P2-201ENST00000427566 ARHGEF28Q8N1W1 1705 aaKnown RBP22.51■■□□□ 1.19
CLK3P2-201ENST00000427566 ESCO1Q5FWF5 840 aa22.49■■□□□ 1.19
CLK3P2-201ENST00000427566 JCADQ9P266 1359 aa22.49■■□□□ 1.19
CLK3P2-201ENST00000427566 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
CLK3P2-201ENST00000427566 TRPM1Q7Z4N2 1603 aa22.47■■□□□ 1.19
CLK3P2-201ENST00000427566 MINK1Q8N4C8 1332 aaPredicted RBP22.45■■□□□ 1.18
CLK3P2-201ENST00000427566 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
CLK3P2-201ENST00000427566 LRRC59Q96AG4 307 aaKnown RBP22.41■■□□□ 1.18
CLK3P2-201ENST00000427566 ADGRB2O60241 1585 aa22.41■■□□□ 1.18
CLK3P2-201ENST00000427566 KIF1AQ12756 1690 aa22.4■■□□□ 1.18
CLK3P2-201ENST00000427566 ILDR2Q71H61 639 aa22.4■■□□□ 1.18
CLK3P2-201ENST00000427566 NUTM2BA6NNL0 878 aaPredicted RBP22.39■■□□□ 1.17
CLK3P2-201ENST00000427566 NUTM2EB1AL46 878 aaPredicted RBP22.39■■□□□ 1.17
CLK3P2-201ENST00000427566 FOXO3O43524 673 aa22.39■■□□□ 1.17
CLK3P2-201ENST00000427566 NUTM2AQ8IVF1 878 aaPredicted RBP22.39■■□□□ 1.17
CLK3P2-201ENST00000427566 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.17
CLK3P2-201ENST00000427566 XPCQ01831 940 aaPredicted RBP22.38■■□□□ 1.17
CLK3P2-201ENST00000427566 MEX3CQ5U5Q3 659 aaKnown RBP22.38■■□□□ 1.17
CLK3P2-201ENST00000427566 SPATA31A6Q5VVP1 1343 aa22.38■■□□□ 1.17
CLK3P2-201ENST00000427566 USP32Q8NFA0 1604 aa22.37■■□□□ 1.17
CLK3P2-201ENST00000427566 NPHP3Q7Z494 1330 aa22.37■■□□□ 1.17
CLK3P2-201ENST00000427566 TIMELESSQ9UNS1 1208 aa22.36■■□□□ 1.17
CLK3P2-201ENST00000427566 SOS2Q07890 1332 aaPredicted RBP22.35■■□□□ 1.17
CLK3P2-201ENST00000427566 RALGAPBQ86X10 1494 aa22.35■■□□□ 1.17
CLK3P2-201ENST00000427566 LRP6O75581 1613 aa22.35■■□□□ 1.17
CLK3P2-201ENST00000427566 QRICH2Q9H0J4 1663 aa22.35■■□□□ 1.17
CLK3P2-201ENST00000427566 PHF8Q9UPP1 1060 aa22.34■■□□□ 1.17
CLK3P2-201ENST00000427566 GPRASP1Q5JY77 1395 aa22.33■■□□□ 1.17
CLK3P2-201ENST00000427566 WASLO00401 505 aaPredicted RBP22.33■■□□□ 1.16
CLK3P2-201ENST00000427566 ITSN1Q15811 1721 aa22.32■■□□□ 1.16
CLK3P2-201ENST00000427566 PNPLA6Q8IY17 1366 aa22.32■■□□□ 1.16
CLK3P2-201ENST00000427566 PMFBP1Q8TBY8 1022 aa22.32■■□□□ 1.16
CLK3P2-201ENST00000427566 EIF3AQ14152 1382 aaKnown RBP22.31■■□□□ 1.16
CLK3P2-201ENST00000427566 PXDNQ92626 1479 aa22.31■■□□□ 1.16
CLK3P2-201ENST00000427566 TULP4Q9NRJ4 1543 aa22.31■■□□□ 1.16
CLK3P2-201ENST00000427566 ANKARQ7Z5J8 1434 aa22.31■■□□□ 1.16
CLK3P2-201ENST00000427566 CARD11Q9BXL7 1154 aa22.3■■□□□ 1.16
CLK3P2-201ENST00000427566 CENPJQ9HC77 1338 aaPredicted RBP22.29■■□□□ 1.16
CLK3P2-201ENST00000427566 KRT28Q7Z3Y7 464 aa22.28■■□□□ 1.16
CLK3P2-201ENST00000427566 CDK19Q9BWU1 502 aa22.28■■□□□ 1.16
CLK3P2-201ENST00000427566 RGS17Q9UGC6 210 aaPredicted RBP22.28■■□□□ 1.16
CLK3P2-201ENST00000427566 PRR36Q9H6K5 1346 aa22.28■■□□□ 1.16
CLK3P2-201ENST00000427566 PSME1Q06323 249 aa22.27■■□□□ 1.16
CLK3P2-201ENST00000427566 COL22A1Q8NFW1 1626 aaPredicted RBP22.25■■□□□ 1.15
CLK3P2-201ENST00000427566 PLEKHG5O94827 1062 aa22.25■■□□□ 1.15
CLK3P2-201ENST00000427566 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
CLK3P2-201ENST00000427566 ADAMTS2O95450 1211 aa22.24■■□□□ 1.15
CLK3P2-201ENST00000427566 NUDT16Q96DE0 195 aaKnown RBP22.24■■□□□ 1.15
CLK3P2-201ENST00000427566 LMOD2Q6P5Q4 547 aa22.23■■□□□ 1.15
CLK3P2-201ENST00000427566 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
CLK3P2-201ENST00000427566 NGDNQ8NEJ9 315 aaKnown RBP22.22■■□□□ 1.15
CLK3P2-201ENST00000427566 ATP7BP35670 1465 aa22.22■■□□□ 1.15
CLK3P2-201ENST00000427566 C8orf37Q96NL8 207 aa22.22■■□□□ 1.15
CLK3P2-201ENST00000427566 MARF1Q9Y4F3 1742 aaKnown RBP22.21■■□□□ 1.15
CLK3P2-201ENST00000427566 SPATA31A3Q5VYP0 1347 aa22.21■■□□□ 1.15
CLK3P2-201ENST00000427566 TOPAZ1Q8N9V7 1692 aa22.21■■□□□ 1.15
CLK3P2-201ENST00000427566 POTEAQ6S8J7 498 aa22.2■■□□□ 1.14
CLK3P2-201ENST00000427566 TNS3Q68CZ2 1445 aa22.19■■□□□ 1.14
CLK3P2-201ENST00000427566 TRPM3Q9HCF6 1732 aaPredicted RBP22.19■■□□□ 1.14
CLK3P2-201ENST00000427566 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
CLK3P2-201ENST00000427566 AFF2P51816 1311 aa22.18■■□□□ 1.14
CLK3P2-201ENST00000427566 HAP1P54257 671 aaPredicted RBP22.17■■□□□ 1.14
CLK3P2-201ENST00000427566 NGLY1Q96IV0 654 aa22.17■■□□□ 1.14
CLK3P2-201ENST00000427566 PAK3O75914 559 aaPredicted RBP22.16■■□□□ 1.14
CLK3P2-201ENST00000427566 ZNF772Q68DY9 489 aaPredicted RBP22.16■■□□□ 1.14
CLK3P2-201ENST00000427566 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
CLK3P2-201ENST00000427566 CCDC61Q9Y6R9 512 aa22.15■■□□□ 1.14
CLK3P2-201ENST00000427566 SBNO1A3KN83 1393 aa22.15■■□□□ 1.14
CLK3P2-201ENST00000427566 EVC2Q86UK5 1308 aa22.14■■□□□ 1.14
CLK3P2-201ENST00000427566 USP47Q96K76 1375 aa22.14■■□□□ 1.13
CLK3P2-201ENST00000427566 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
CLK3P2-201ENST00000427566 ALS2Q96Q42 1657 aa22.13■■□□□ 1.13
CLK3P2-201ENST00000427566 SOCS7O14512 581 aa22.13■■□□□ 1.13
CLK3P2-201ENST00000427566 CABLES1Q8TDN4 633 aa22.13■■□□□ 1.13
CLK3P2-201ENST00000427566 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
CLK3P2-201ENST00000427566 ACEP12821 1306 aa22.12■■□□□ 1.13
CLK3P2-201ENST00000427566 ARHGEF10O15013 1369 aa22.11■■□□□ 1.13
CLK3P2-201ENST00000427566 TESK2Q96S53 571 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms