RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 QRICH2Q9H0J4 1663 aa12.72□□□□□ -0.37
TPTE-201ENST00000427445 CFAP70Q5T0N1 1121 aa12.72□□□□□ -0.37
TPTE-201ENST00000427445 CARD14Q9BXL6 1004 aa12.72□□□□□ -0.37
TPTE-201ENST00000427445 ZNF518AQ6AHZ1 1483 aa12.71□□□□□ -0.37
TPTE-201ENST00000427445 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
TPTE-201ENST00000427445 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.37
TPTE-201ENST00000427445 BCAR3O75815 825 aa12.71□□□□□ -0.38
TPTE-201ENST00000427445 CFAP53Q96M91 514 aa12.71□□□□□ -0.38
TPTE-201ENST00000427445 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.38
TPTE-201ENST00000427445 NSD3Q9BZ95 1437 aa12.7□□□□□ -0.38
TPTE-201ENST00000427445 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
TPTE-201ENST00000427445 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
TPTE-201ENST00000427445 RGS3P49796 1198 aa12.7□□□□□ -0.38
TPTE-201ENST00000427445 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
TPTE-201ENST00000427445 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
TPTE-201ENST00000427445 C14orf93Q9H972 538 aaKnown RBP12.69□□□□□ -0.38
TPTE-201ENST00000427445 UPF2Q9HAU5 1272 aaKnown RBP12.69□□□□□ -0.38
TPTE-201ENST00000427445 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
TPTE-201ENST00000427445 UGGT1Q9NYU2 1555 aa12.69□□□□□ -0.38
TPTE-201ENST00000427445 NOS1P29475 1434 aa12.68□□□□□ -0.38
TPTE-201ENST00000427445 MYH16Q9H6N6 1097 aa12.68□□□□□ -0.38
TPTE-201ENST00000427445 RARSP54136 660 aaKnown RBP12.67□□□□□ -0.38
TPTE-201ENST00000427445 IGHDP01880 384 aa12.67□□□□□ -0.38
TPTE-201ENST00000427445 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
TPTE-201ENST00000427445 MLH3Q9UHC1 1453 aa12.66□□□□□ -0.38
TPTE-201ENST00000427445 USP19O94966 1318 aa12.66□□□□□ -0.38
TPTE-201ENST00000427445 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
TPTE-201ENST00000427445 ANKRD36BQ8N2N9 1353 aa12.66□□□□□ -0.38
TPTE-201ENST00000427445 RWDD1Q9H446 243 aaPredicted RBP12.66□□□□□ -0.38
TPTE-201ENST00000427445 TCP11L2Q8N4U5 519 aa12.64□□□□□ -0.39
TPTE-201ENST00000427445 PIK3C2BO00750 1634 aa12.64□□□□□ -0.39
TPTE-201ENST00000427445 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
TPTE-201ENST00000427445 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
TPTE-201ENST00000427445 COG6Q9Y2V7 657 aa12.64□□□□□ -0.39
TPTE-201ENST00000427445 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 GLI2P10070 1586 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 NPATQ14207 1427 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 MED14O60244 1454 aa12.63□□□□□ -0.39
TPTE-201ENST00000427445 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
TPTE-201ENST00000427445 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
TPTE-201ENST00000427445 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
TPTE-201ENST00000427445 PANK1Q8TE04 598 aa12.62□□□□□ -0.39
TPTE-201ENST00000427445 TBC1D32Q96NH3 1257 aa12.62□□□□□ -0.39
TPTE-201ENST00000427445 IL16Q14005 1332 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 ASXL2Q76L83 1435 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 POGZQ7Z3K3 1410 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 ABCC3O15438 1527 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 ANKRD26Q9UPS8 1709 aa12.61□□□□□ -0.39
TPTE-201ENST00000427445 FRAT2O75474 233 aaPredicted RBP12.61□□□□□ -0.39
TPTE-201ENST00000427445 FRMPD1Q5SYB0 1578 aa12.6□□□□□ -0.39
TPTE-201ENST00000427445 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
TPTE-201ENST00000427445 L1TD1Q5T7N2 865 aaKnown RBP12.6□□□□□ -0.39
TPTE-201ENST00000427445 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
TPTE-201ENST00000427445 ARHGAP31Q2M1Z3 1444 aa12.6□□□□□ -0.39
TPTE-201ENST00000427445 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
TPTE-201ENST00000427445 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
TPTE-201ENST00000427445 VGFO15240 615 aaPredicted RBP12.59□□□□□ -0.39
TPTE-201ENST00000427445 MTHFSP49914 203 aa12.59□□□□□ -0.39
TPTE-201ENST00000427445 NEXMIFQ5QGS0 1516 aa12.58□□□□□ -0.4
TPTE-201ENST00000427445 HDAC1Q13547 482 aaPredicted RBP12.58□□□□□ -0.4
TPTE-201ENST00000427445 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
TPTE-201ENST00000427445 PDZRN3Q9UPQ7 1066 aa12.58□□□□□ -0.4
TPTE-201ENST00000427445 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
TPTE-201ENST00000427445 FAM43AQ8N2R8 423 aa12.57□□□□□ -0.4
TPTE-201ENST00000427445 CLTCQ00610 1675 aaKnown RBP12.57□□□□□ -0.4
TPTE-201ENST00000427445 DZIP1LQ8IYY4 767 aaKnown RBP12.57□□□□□ -0.4
TPTE-201ENST00000427445 ANTXR1Q9H6X2 564 aa12.57□□□□□ -0.4
TPTE-201ENST00000427445 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
TPTE-201ENST00000427445 ATAD2Q6PL18 1390 aa12.56□□□□□ -0.4
TPTE-201ENST00000427445 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
TPTE-201ENST00000427445 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
TPTE-201ENST00000427445 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
TPTE-201ENST00000427445 RLBP1P12271 317 aa12.55□□□□□ -0.4
TPTE-201ENST00000427445 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
TPTE-201ENST00000427445 CHMP4BQ9H444 224 aaKnown RBP12.55□□□□□ -0.4
TPTE-201ENST00000427445 BRPF3Q9ULD4 1205 aa12.55□□□□□ -0.4
TPTE-201ENST00000427445 NEO1Q92859 1461 aa12.55□□□□□ -0.4
TPTE-201ENST00000427445 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
TPTE-201ENST00000427445 SEC24BO95487 1268 aa12.54□□□□□ -0.4
TPTE-201ENST00000427445 U2AF1L5P0DN76 240 aaPredicted RBP12.54□□□□□ -0.4
TPTE-201ENST00000427445 U2AF1Q01081 240 aaKnown RBP eCLIP12.54□□□□□ -0.4
TPTE-201ENST00000427445 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
TPTE-201ENST00000427445 IPO8O15397 1037 aaKnown RBP12.53□□□□□ -0.4
TPTE-201ENST00000427445 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
TPTE-201ENST00000427445 CHGAP10645 457 aaKnown RBP12.53□□□□□ -0.4
TPTE-201ENST00000427445 NEUROD2Q15784 382 aa12.52□□□□□ -0.4
TPTE-201ENST00000427445 REREQ9P2R6 1566 aa12.52□□□□□ -0.4
TPTE-201ENST00000427445 RRP7AQ9Y3A4 280 aaKnown RBP12.52□□□□□ -0.4
TPTE-201ENST00000427445 CD109Q6YHK3 1445 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 BRPF1P55201 1214 aaPredicted RBP12.52□□□□□ -0.41
TPTE-201ENST00000427445 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 SMC5Q8IY18 1101 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
TPTE-201ENST00000427445 ISY1Q9ULR0 285 aaKnown RBP12.52□□□□□ -0.41
TPTE-201ENST00000427445 TERF2IPQ9NYB0 399 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms