RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 WAPLQ7Z5K2 1190 aa14.92□□□□□ -0.02
COMMD1-202ENST00000427417 LRRC59Q96AG4 307 aaKnown RBP14.92□□□□□ -0.02
COMMD1-202ENST00000427417 PLEKHH1Q9ULM0 1364 aa14.92□□□□□ -0.02
COMMD1-202ENST00000427417 NRXN1Q9ULB1 1477 aa14.91□□□□□ -0.02
COMMD1-202ENST00000427417 C14orf93Q9H972 538 aaKnown RBP14.91□□□□□ -0.02
COMMD1-202ENST00000427417 PNPLA6Q8IY17 1366 aa14.9□□□□□ -0.02
COMMD1-202ENST00000427417 NUTM2FA1L443 756 aa14.9□□□□□ -0.02
COMMD1-202ENST00000427417 STAC3Q96MF2 364 aa14.9□□□□□ -0.02
COMMD1-202ENST00000427417 LAMC1P11047 1609 aa14.9□□□□□ -0.02
COMMD1-202ENST00000427417 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
COMMD1-202ENST00000427417 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
COMMD1-202ENST00000427417 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
COMMD1-202ENST00000427417 DHX57Q6P158 1386 aaKnown RBP14.89□□□□□ -0.03
COMMD1-202ENST00000427417 SIRT1Q96EB6 747 aa14.89□□□□□ -0.03
COMMD1-202ENST00000427417 CFAP70Q5T0N1 1121 aa14.87□□□□□ -0.03
COMMD1-202ENST00000427417 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
COMMD1-202ENST00000427417 AFF2P51816 1311 aa14.86□□□□□ -0.03
COMMD1-202ENST00000427417 XPCQ01831 940 aaPredicted RBP14.85□□□□□ -0.03
COMMD1-202ENST00000427417 ZNF772Q68DY9 489 aaPredicted RBP14.85□□□□□ -0.03
COMMD1-202ENST00000427417 DCAF11Q8TEB1 546 aa14.85□□□□□ -0.03
COMMD1-202ENST00000427417 SOS2Q07890 1332 aaPredicted RBP14.85□□□□□ -0.03
COMMD1-202ENST00000427417 ADAMTS2O95450 1211 aa14.84□□□□□ -0.03
COMMD1-202ENST00000427417 C8orf37Q96NL8 207 aa14.84□□□□□ -0.03
COMMD1-202ENST00000427417 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
COMMD1-202ENST00000427417 NPHP3Q7Z494 1330 aa14.84□□□□□ -0.03
COMMD1-202ENST00000427417 FMN2Q9NZ56 1722 aa14.83□□□□□ -0.03
COMMD1-202ENST00000427417 SAFB2Q14151 953 aaKnown RBP eCLIP14.83□□□□□ -0.04
COMMD1-202ENST00000427417 FOXO3O43524 673 aa14.82□□□□□ -0.04
COMMD1-202ENST00000427417 DLC1Q96QB1 1528 aa14.82□□□□□ -0.04
COMMD1-202ENST00000427417 PRAM1Q96QH2 718 aa14.81□□□□□ -0.04
COMMD1-202ENST00000427417 POGKQ9P215 609 aa14.81□□□□□ -0.04
COMMD1-202ENST00000427417 PXDNQ92626 1479 aa14.81□□□□□ -0.04
COMMD1-202ENST00000427417 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
COMMD1-202ENST00000427417 ADGRB1O14514 1584 aa14.79□□□□□ -0.04
COMMD1-202ENST00000427417 COL22A1Q8NFW1 1626 aaPredicted RBP14.78□□□□□ -0.04
COMMD1-202ENST00000427417 RXRBP28702 533 aa14.78□□□□□ -0.04
COMMD1-202ENST00000427417 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
COMMD1-202ENST00000427417 NGLY1Q96IV0 654 aa14.77□□□□□ -0.05
COMMD1-202ENST00000427417 KIF1AQ12756 1690 aa14.77□□□□□ -0.05
COMMD1-202ENST00000427417 QTRT2Q9H974 415 aaKnown RBP14.76□□□□□ -0.05
COMMD1-202ENST00000427417 RGS12O14924 1447 aa14.75□□□□□ -0.05
COMMD1-202ENST00000427417 EIF3AQ14152 1382 aaKnown RBP14.74□□□□□ -0.05
COMMD1-202ENST00000427417 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
COMMD1-202ENST00000427417 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
COMMD1-202ENST00000427417 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
COMMD1-202ENST00000427417 ANKARQ7Z5J8 1434 aa14.74□□□□□ -0.05
COMMD1-202ENST00000427417 ADGRB2O60241 1585 aa14.73□□□□□ -0.05
COMMD1-202ENST00000427417 MINK1Q8N4C8 1332 aaPredicted RBP14.73□□□□□ -0.05
COMMD1-202ENST00000427417 PLEKHG5O94827 1062 aa14.73□□□□□ -0.05
COMMD1-202ENST00000427417 PSME1Q06323 249 aa14.73□□□□□ -0.05
COMMD1-202ENST00000427417 USP21Q9UK80 565 aa14.73□□□□□ -0.05
COMMD1-202ENST00000427417 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
COMMD1-202ENST00000427417 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
COMMD1-202ENST00000427417 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
COMMD1-202ENST00000427417 SPATA31A3Q5VYP0 1347 aa14.71□□□□□ -0.05
COMMD1-202ENST00000427417 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
COMMD1-202ENST00000427417 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
COMMD1-202ENST00000427417 UPF1Q92900 1129 aaKnown RBP eCLIP14.71□□□□□ -0.05
COMMD1-202ENST00000427417 KIAA1210Q9ULL0 1709 aa14.7□□□□□ -0.06
COMMD1-202ENST00000427417 ARHGEF28Q8N1W1 1705 aaKnown RBP14.69□□□□□ -0.06
COMMD1-202ENST00000427417 PRR36Q9H6K5 1346 aa14.69□□□□□ -0.06
COMMD1-202ENST00000427417 WASLO00401 505 aaPredicted RBP14.69□□□□□ -0.06
COMMD1-202ENST00000427417 FNBP4Q8N3X1 1017 aaPredicted RBP14.69□□□□□ -0.06
COMMD1-202ENST00000427417 ATRNO75882 1429 aa14.68□□□□□ -0.06
COMMD1-202ENST00000427417 TNS3Q68CZ2 1445 aa14.68□□□□□ -0.06
COMMD1-202ENST00000427417 TULP4Q9NRJ4 1543 aa14.68□□□□□ -0.06
COMMD1-202ENST00000427417 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
COMMD1-202ENST00000427417 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
COMMD1-202ENST00000427417 LMOD2Q6P5Q4 547 aa14.67□□□□□ -0.06
COMMD1-202ENST00000427417 TRPC5Q9UL62 973 aaPredicted RBP14.67□□□□□ -0.06
COMMD1-202ENST00000427417 BCL9LQ86UU0 1499 aa14.67□□□□□ -0.06
COMMD1-202ENST00000427417 ARHGEF10O15013 1369 aa14.66□□□□□ -0.06
COMMD1-202ENST00000427417 HAP1P54257 671 aaPredicted RBP14.66□□□□□ -0.06
COMMD1-202ENST00000427417 ABCA3Q99758 1704 aa14.66□□□□□ -0.06
COMMD1-202ENST00000427417 GPRASP1Q5JY77 1395 aa14.65□□□□□ -0.06
COMMD1-202ENST00000427417 TRPM3Q9HCF6 1732 aaPredicted RBP14.64□□□□□ -0.07
COMMD1-202ENST00000427417 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
COMMD1-202ENST00000427417 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
COMMD1-202ENST00000427417 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
COMMD1-202ENST00000427417 NGDNQ8NEJ9 315 aaKnown RBP14.63□□□□□ -0.07
COMMD1-202ENST00000427417 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
COMMD1-202ENST00000427417 SLIT2O94813 1529 aa14.62□□□□□ -0.07
COMMD1-202ENST00000427417 NUDT16Q96DE0 195 aaKnown RBP14.62□□□□□ -0.07
COMMD1-202ENST00000427417 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.62□□□□□ -0.07
COMMD1-202ENST00000427417 ATP7BP35670 1465 aa14.62□□□□□ -0.07
COMMD1-202ENST00000427417 PLCH1Q4KWH8 1693 aa14.61□□□□□ -0.07
COMMD1-202ENST00000427417 GLI3P10071 1580 aa14.61□□□□□ -0.07
COMMD1-202ENST00000427417 CDK19Q9BWU1 502 aa14.61□□□□□ -0.07
COMMD1-202ENST00000427417 ALS2Q96Q42 1657 aa14.61□□□□□ -0.07
COMMD1-202ENST00000427417 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
COMMD1-202ENST00000427417 ITSN1Q15811 1721 aa14.61□□□□□ -0.07
COMMD1-202ENST00000427417 TRIM26Q12899 539 aaPredicted RBP14.6□□□□□ -0.07
COMMD1-202ENST00000427417 UNC5CLQ8IV45 518 aa14.6□□□□□ -0.07
COMMD1-202ENST00000427417 GJD4Q96KN9 370 aaPredicted RBP14.6□□□□□ -0.07
COMMD1-202ENST00000427417 RALGAPBQ86X10 1494 aa14.59□□□□□ -0.07
COMMD1-202ENST00000427417 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
COMMD1-202ENST00000427417 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
COMMD1-202ENST00000427417 ATAD2Q6PL18 1390 aa14.58□□□□□ -0.08
COMMD1-202ENST00000427417 SRPK2P78362 688 aaKnown RBP14.57□□□□□ -0.08
COMMD1-202ENST00000427417 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms