RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 ESCO1Q5FWF5 840 aa13.19□□□□□ -0.3
VNN3-208ENST00000427187 MARF1Q9Y4F3 1742 aaKnown RBP13.19□□□□□ -0.3
VNN3-208ENST00000427187 BCL9LQ86UU0 1499 aa13.18□□□□□ -0.3
VNN3-208ENST00000427187 PPLO60437 1756 aa13.18□□□□□ -0.3
VNN3-208ENST00000427187 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
VNN3-208ENST00000427187 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
VNN3-208ENST00000427187 PXDNQ92626 1479 aa13.17□□□□□ -0.3
VNN3-208ENST00000427187 HFM1A2PYH4 1435 aa13.17□□□□□ -0.3
VNN3-208ENST00000427187 FOXO3O43524 673 aa13.17□□□□□ -0.3
VNN3-208ENST00000427187 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
VNN3-208ENST00000427187 NAIPQ13075 1403 aa13.16□□□□□ -0.3
VNN3-208ENST00000427187 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
VNN3-208ENST00000427187 PRAG1Q86YV5 1406 aa13.15□□□□□ -0.3
VNN3-208ENST00000427187 STK26Q9P289 416 aa13.15□□□□□ -0.3
VNN3-208ENST00000427187 FOXD1Q16676 465 aa13.14□□□□□ -0.31
VNN3-208ENST00000427187 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
VNN3-208ENST00000427187 GJD4Q96KN9 370 aaPredicted RBP13.14□□□□□ -0.31
VNN3-208ENST00000427187 GLI3P10071 1580 aa13.13□□□□□ -0.31
VNN3-208ENST00000427187 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
VNN3-208ENST00000427187 ADGRF5Q8IZF2 1346 aa13.13□□□□□ -0.31
VNN3-208ENST00000427187 PLEKHH1Q9ULM0 1364 aa13.12□□□□□ -0.31
VNN3-208ENST00000427187 BRWD3Q6RI45 1802 aa13.12□□□□□ -0.31
VNN3-208ENST00000427187 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
VNN3-208ENST00000427187 RPGRIP1LQ68CZ1 1315 aa13.12□□□□□ -0.31
VNN3-208ENST00000427187 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
VNN3-208ENST00000427187 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.11□□□□□ -0.31
VNN3-208ENST00000427187 DEFB132Q7Z7B7 95 aa13.11□□□□□ -0.31
VNN3-208ENST00000427187 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
VNN3-208ENST00000427187 RRBP1Q9P2E9 1410 aaKnown RBP13.1□□□□□ -0.31
VNN3-208ENST00000427187 SLIT2O94813 1529 aa13.09□□□□□ -0.31
VNN3-208ENST00000427187 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
VNN3-208ENST00000427187 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
VNN3-208ENST00000427187 UNC5CLQ8IV45 518 aa13.09□□□□□ -0.31
VNN3-208ENST00000427187 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
VNN3-208ENST00000427187 LRPPRCP42704 1394 aaKnown RBP13.08□□□□□ -0.31
VNN3-208ENST00000427187 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
VNN3-208ENST00000427187 RGPD8O14715 1765 aaPredicted RBP13.08□□□□□ -0.32
VNN3-208ENST00000427187 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
VNN3-208ENST00000427187 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
VNN3-208ENST00000427187 BLMP54132 1417 aaPredicted RBP13.07□□□□□ -0.32
VNN3-208ENST00000427187 KNDC1Q76NI1 1749 aa13.07□□□□□ -0.32
VNN3-208ENST00000427187 IFT172Q9UG01 1749 aa13.07□□□□□ -0.32
VNN3-208ENST00000427187 TECPR2O15040 1411 aa13.06□□□□□ -0.32
VNN3-208ENST00000427187 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
VNN3-208ENST00000427187 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
VNN3-208ENST00000427187 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
VNN3-208ENST00000427187 SEPT12Q8IYM1 358 aa13.06□□□□□ -0.32
VNN3-208ENST00000427187 HAP1P54257 671 aaPredicted RBP13.05□□□□□ -0.32
VNN3-208ENST00000427187 CCDC9Q9Y3X0 531 aaKnown RBP13.05□□□□□ -0.32
VNN3-208ENST00000427187 CCDC144AA2RUR9 1427 aa13.05□□□□□ -0.32
VNN3-208ENST00000427187 ABCA3Q99758 1704 aa13.04□□□□□ -0.32
VNN3-208ENST00000427187 ABCC11Q96J66 1382 aa13.04□□□□□ -0.32
VNN3-208ENST00000427187 SPATA31E1Q6ZUB1 1445 aa13.04□□□□□ -0.32
VNN3-208ENST00000427187 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
VNN3-208ENST00000427187 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
VNN3-208ENST00000427187 TNS3Q68CZ2 1445 aa13.03□□□□□ -0.32
VNN3-208ENST00000427187 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
VNN3-208ENST00000427187 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
VNN3-208ENST00000427187 SF3B2Q13435 895 aaKnown RBP13.02□□□□□ -0.33
VNN3-208ENST00000427187 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
VNN3-208ENST00000427187 A0A0G2JS52 829 aa13.01□□□□□ -0.33
VNN3-208ENST00000427187 MYT1Q01538 1121 aa13.01□□□□□ -0.33
VNN3-208ENST00000427187 VPS72Q15906 364 aa13.01□□□□□ -0.33
VNN3-208ENST00000427187 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
VNN3-208ENST00000427187 ANKRD30BQ9BXX2 1392 aa13.01□□□□□ -0.33
VNN3-208ENST00000427187 NWD2Q9ULI1 1742 aa13□□□□□ -0.33
VNN3-208ENST00000427187 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
VNN3-208ENST00000427187 PMFBP1Q8TBY8 1022 aa12.99□□□□□ -0.33
VNN3-208ENST00000427187 LRP5O75197 1615 aa12.99□□□□□ -0.33
VNN3-208ENST00000427187 NRXN1Q9ULB1 1477 aa12.98□□□□□ -0.33
VNN3-208ENST00000427187 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
VNN3-208ENST00000427187 PSME1Q06323 249 aa12.98□□□□□ -0.33
VNN3-208ENST00000427187 FAM98CQ17RN3 349 aaKnown RBP12.98□□□□□ -0.33
VNN3-208ENST00000427187 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
VNN3-208ENST00000427187 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
VNN3-208ENST00000427187 CFAP70Q5T0N1 1121 aa12.97□□□□□ -0.33
VNN3-208ENST00000427187 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
VNN3-208ENST00000427187 MPHOSPH9Q99550 1183 aa12.97□□□□□ -0.33
VNN3-208ENST00000427187 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
VNN3-208ENST00000427187 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
VNN3-208ENST00000427187 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
VNN3-208ENST00000427187 C14orf93Q9H972 538 aaKnown RBP12.95□□□□□ -0.34
VNN3-208ENST00000427187 BTG4Q9NY30 223 aa12.95□□□□□ -0.34
VNN3-208ENST00000427187 TRPM3Q9HCF6 1732 aaPredicted RBP12.94□□□□□ -0.34
VNN3-208ENST00000427187 HRCP23327 699 aa12.94□□□□□ -0.34
VNN3-208ENST00000427187 BAG6P46379 1132 aa12.94□□□□□ -0.34
VNN3-208ENST00000427187 EN1Q05925 392 aaPredicted RBP12.94□□□□□ -0.34
VNN3-208ENST00000427187 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
VNN3-208ENST00000427187 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
VNN3-208ENST00000427187 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
VNN3-208ENST00000427187 RGPD1P0DJD0 1748 aa12.92□□□□□ -0.34
VNN3-208ENST00000427187 POGKQ9P215 609 aa12.92□□□□□ -0.34
VNN3-208ENST00000427187 ALS2Q96Q42 1657 aa12.92□□□□□ -0.34
VNN3-208ENST00000427187 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
VNN3-208ENST00000427187 R3HDM1Q15032 1099 aaKnown RBP12.91□□□□□ -0.34
VNN3-208ENST00000427187 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
VNN3-208ENST00000427187 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
VNN3-208ENST00000427187 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
VNN3-208ENST00000427187 TNS1Q9HBL0 1735 aaKnown RBP12.9□□□□□ -0.34
VNN3-208ENST00000427187 CRYBG1Q9Y4K1 1723 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms