RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 SOS2Q07890 1332 aaPredicted RBP15.24■□□□□ 0.03
HDLBP-213ENST00000427007 KNDC1Q76NI1 1749 aa15.24■□□□□ 0.03
HDLBP-213ENST00000427007 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
HDLBP-213ENST00000427007 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
HDLBP-213ENST00000427007 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
HDLBP-213ENST00000427007 COL22A1Q8NFW1 1626 aaPredicted RBP15.22■□□□□ 0.03
HDLBP-213ENST00000427007 NUTM2FA1L443 756 aa15.22■□□□□ 0.03
HDLBP-213ENST00000427007 TMEM132EQ6IEE7 984 aa15.22■□□□□ 0.03
HDLBP-213ENST00000427007 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
HDLBP-213ENST00000427007 NGLY1Q96IV0 654 aa15.22■□□□□ 0.03
HDLBP-213ENST00000427007 QTRT2Q9H974 415 aaKnown RBP15.22■□□□□ 0.03
HDLBP-213ENST00000427007 RGS12O14924 1447 aa15.22■□□□□ 0.03
HDLBP-213ENST00000427007 PIK3C2GO75747 1445 aa15.21■□□□□ 0.03
HDLBP-213ENST00000427007 LRPPRCP42704 1394 aaKnown RBP15.21■□□□□ 0.02
HDLBP-213ENST00000427007 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.02
HDLBP-213ENST00000427007 TECPR2O15040 1411 aa15.2■□□□□ 0.02
HDLBP-213ENST00000427007 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
HDLBP-213ENST00000427007 RBM6P78332 1123 aaKnown RBP15.19■□□□□ 0.02
HDLBP-213ENST00000427007 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
HDLBP-213ENST00000427007 PXDNQ92626 1479 aa15.19■□□□□ 0.02
HDLBP-213ENST00000427007 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
HDLBP-213ENST00000427007 MARF1Q9Y4F3 1742 aaKnown RBP15.18■□□□□ 0.02
HDLBP-213ENST00000427007 FOXO3O43524 673 aa15.18■□□□□ 0.02
HDLBP-213ENST00000427007 USP21Q9UK80 565 aa15.18■□□□□ 0.02
HDLBP-213ENST00000427007 YTHDC2Q9H6S0 1430 aaKnown RBP15.17■□□□□ 0.02
HDLBP-213ENST00000427007 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
HDLBP-213ENST00000427007 MYOM2P54296 1465 aa15.16■□□□□ 0.02
HDLBP-213ENST00000427007 RGPD8O14715 1765 aaPredicted RBP15.16■□□□□ 0.02
HDLBP-213ENST00000427007 KIF1AQ12756 1690 aa15.15■□□□□ 0.02
HDLBP-213ENST00000427007 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
HDLBP-213ENST00000427007 CFAP70Q5T0N1 1121 aa15.13■□□□□ 0.01
HDLBP-213ENST00000427007 FNBP4Q8N3X1 1017 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-213ENST00000427007 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
HDLBP-213ENST00000427007 TRPC5Q9UL62 973 aaPredicted RBP15.13■□□□□ 0.01
HDLBP-213ENST00000427007 NRXN1Q9ULB1 1477 aa15.13■□□□□ 0.01
HDLBP-213ENST00000427007 ATRNO75882 1429 aa15.12■□□□□ 0.01
HDLBP-213ENST00000427007 SAFB2Q14151 953 aaKnown RBP eCLIP15.11■□□□□ 0.01
HDLBP-213ENST00000427007 ACIN1Q9UKV3 1341 aaKnown RBP15.11■□□□□ 0.01
HDLBP-213ENST00000427007 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
HDLBP-213ENST00000427007 BCL9LQ86UU0 1499 aa15.1■□□□□ 0.01
HDLBP-213ENST00000427007 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
HDLBP-213ENST00000427007 USP32Q8NFA0 1604 aa15.08■□□□□ 0
HDLBP-213ENST00000427007 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
HDLBP-213ENST00000427007 PRAM1Q96QH2 718 aa15.08■□□□□ 0
HDLBP-213ENST00000427007 SPATA31A3Q5VYP0 1347 aa15.08■□□□□ 0
HDLBP-213ENST00000427007 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.08■□□□□ 0
HDLBP-213ENST00000427007 ATAD2Q6PL18 1390 aa15.08■□□□□ 0
HDLBP-213ENST00000427007 PLEKHG5O94827 1062 aa15.07■□□□□ 0
HDLBP-213ENST00000427007 PHF8Q9UPP1 1060 aa15.07■□□□□ 0
HDLBP-213ENST00000427007 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
HDLBP-213ENST00000427007 DLC1Q96QB1 1528 aa15.06■□□□□ 0
HDLBP-213ENST00000427007 ADGRB1O14514 1584 aa15.06■□□□□ 0
HDLBP-213ENST00000427007 ABCA3Q99758 1704 aa15.06■□□□□ 0
HDLBP-213ENST00000427007 POGKQ9P215 609 aa15.05■□□□□ -0
HDLBP-213ENST00000427007 ADGRB2O60241 1585 aa15.04■□□□□ -0
HDLBP-213ENST00000427007 GLI3P10071 1580 aa15.04■□□□□ -0
HDLBP-213ENST00000427007 SLIT2O94813 1529 aa15.04■□□□□ -0
HDLBP-213ENST00000427007 HAP1P54257 671 aaPredicted RBP15.04■□□□□ -0
HDLBP-213ENST00000427007 CABLES1Q8TDN4 633 aa15.04■□□□□ -0
HDLBP-213ENST00000427007 GJD4Q96KN9 370 aaPredicted RBP15.04■□□□□ -0
HDLBP-213ENST00000427007 KDM2AQ9Y2K7 1162 aa15.04■□□□□ -0
HDLBP-213ENST00000427007 PLCH1Q4KWH8 1693 aa15.03■□□□□ -0
HDLBP-213ENST00000427007 PSME1Q06323 249 aa15.03■□□□□ -0
HDLBP-213ENST00000427007 LMOD2Q6P5Q4 547 aa15.03■□□□□ -0
HDLBP-213ENST00000427007 PMFBP1Q8TBY8 1022 aa15.03■□□□□ -0
HDLBP-213ENST00000427007 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
HDLBP-213ENST00000427007 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
HDLBP-213ENST00000427007 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
HDLBP-213ENST00000427007 HIRIP3Q9BW71 556 aaPredicted RBP15.02■□□□□ -0
HDLBP-213ENST00000427007 RALGAPBQ86X10 1494 aa15.01□□□□□ -0.01
HDLBP-213ENST00000427007 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
HDLBP-213ENST00000427007 SBNO1A3KN83 1393 aa15□□□□□ -0.01
HDLBP-213ENST00000427007 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
HDLBP-213ENST00000427007 BRWD3Q6RI45 1802 aa15□□□□□ -0.01
HDLBP-213ENST00000427007 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
HDLBP-213ENST00000427007 NWD2Q9ULI1 1742 aa14.99□□□□□ -0.01
HDLBP-213ENST00000427007 ARHGEF10O15013 1369 aa14.98□□□□□ -0.01
HDLBP-213ENST00000427007 ARHGEF28Q8N1W1 1705 aaKnown RBP14.98□□□□□ -0.01
HDLBP-213ENST00000427007 EP400Q96L91 3159 aa14.98□□□□□ -0.01
HDLBP-213ENST00000427007 TULP4Q9NRJ4 1543 aa14.97□□□□□ -0.01
HDLBP-213ENST00000427007 PRR36Q9H6K5 1346 aa14.97□□□□□ -0.01
HDLBP-213ENST00000427007 ALS2Q96Q42 1657 aa14.97□□□□□ -0.01
HDLBP-213ENST00000427007 CCDC9Q9Y3X0 531 aaKnown RBP14.96□□□□□ -0.01
HDLBP-213ENST00000427007 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
HDLBP-213ENST00000427007 WASLO00401 505 aaPredicted RBP14.95□□□□□ -0.02
HDLBP-213ENST00000427007 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
HDLBP-213ENST00000427007 VPS72Q15906 364 aa14.94□□□□□ -0.02
HDLBP-213ENST00000427007 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
HDLBP-213ENST00000427007 ITSN1Q15811 1721 aa14.94□□□□□ -0.02
HDLBP-213ENST00000427007 CRYBG1Q9Y4K1 1723 aa14.93□□□□□ -0.02
HDLBP-213ENST00000427007 FAM83GA6ND36 823 aa14.93□□□□□ -0.02
HDLBP-213ENST00000427007 CCDC125Q86Z20 511 aa14.93□□□□□ -0.02
HDLBP-213ENST00000427007 SEPT12Q8IYM1 358 aa14.93□□□□□ -0.02
HDLBP-213ENST00000427007 COL14A1Q05707 1796 aaKnown RBP14.92□□□□□ -0.02
HDLBP-213ENST00000427007 ATP7BP35670 1465 aa14.91□□□□□ -0.02
HDLBP-213ENST00000427007 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
HDLBP-213ENST00000427007 HRCP23327 699 aa14.91□□□□□ -0.02
HDLBP-213ENST00000427007 NGDNQ8NEJ9 315 aaKnown RBP14.91□□□□□ -0.02
HDLBP-213ENST00000427007 STAC3Q96MF2 364 aa14.91□□□□□ -0.02
HDLBP-213ENST00000427007 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms