RNA–Protein interactions for RNA: ENST00000426820.6

HIPK1-208, Transcript of homeodomain interacting protein kinase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK1, Length 4,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-208ENST00000426820 PTPRTO14522 1441 aa11.15□□□□□ -0.62
HIPK1-208ENST00000426820 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.63
HIPK1-208ENST00000426820 SYTL4Q96C24 671 aaPredicted RBP11.15□□□□□ -0.63
HIPK1-208ENST00000426820 DDX17Q92841 729 aaKnown RBP11.14□□□□□ -0.63
HIPK1-208ENST00000426820 PIK3R4Q99570 1358 aa11.14□□□□□ -0.63
HIPK1-208ENST00000426820 CEP170BQ9Y4F5 1589 aaPredicted RBP11.14□□□□□ -0.63
HIPK1-208ENST00000426820 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
HIPK1-208ENST00000426820 LRRIQ1Q96JM4 1722 aa11.13□□□□□ -0.63
HIPK1-208ENST00000426820 PRDM15P57071 1507 aaPredicted RBP11.13□□□□□ -0.63
HIPK1-208ENST00000426820 ZNF772Q68DY9 489 aaPredicted RBP11.13□□□□□ -0.63
HIPK1-208ENST00000426820 FRMPD1Q5SYB0 1578 aa11.13□□□□□ -0.63
HIPK1-208ENST00000426820 USP47Q96K76 1375 aa11.13□□□□□ -0.63
HIPK1-208ENST00000426820 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
HIPK1-208ENST00000426820 RAPGEF4Q8WZA2 1011 aa11.12□□□□□ -0.63
HIPK1-208ENST00000426820 NPHP1O15259 732 aa11.12□□□□□ -0.63
HIPK1-208ENST00000426820 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
HIPK1-208ENST00000426820 CGNL1Q0VF96 1302 aa11.12□□□□□ -0.63
HIPK1-208ENST00000426820 ATAD2Q6PL18 1390 aa11.11□□□□□ -0.63
HIPK1-208ENST00000426820 SLC12A5Q9H2X9 1139 aa11.11□□□□□ -0.63
HIPK1-208ENST00000426820 DCAF8L1A6NGE4 600 aa11.11□□□□□ -0.63
HIPK1-208ENST00000426820 MSH5O43196 834 aa11.11□□□□□ -0.63
HIPK1-208ENST00000426820 USP21Q9UK80 565 aa11.11□□□□□ -0.63
HIPK1-208ENST00000426820 METP08581 1390 aa11.1□□□□□ -0.63
HIPK1-208ENST00000426820 YTHDC2Q9H6S0 1430 aaKnown RBP11.1□□□□□ -0.63
HIPK1-208ENST00000426820 NBPF8Q3BBV2 869 aa11.1□□□□□ -0.63
HIPK1-208ENST00000426820 KTN1Q86UP2 1357 aaKnown RBP11.1□□□□□ -0.63
HIPK1-208ENST00000426820 ACEP12821 1306 aa11.1□□□□□ -0.63
HIPK1-208ENST00000426820 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
HIPK1-208ENST00000426820 PLA2R1Q13018 1463 aa11.09□□□□□ -0.63
HIPK1-208ENST00000426820 ZNF316A6NFI3 1004 aaPredicted RBP11.09□□□□□ -0.63
HIPK1-208ENST00000426820 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
HIPK1-208ENST00000426820 EIF2AK4Q9P2K8 1649 aaKnown RBP11.09□□□□□ -0.63
HIPK1-208ENST00000426820 RXRBP28702 533 aa11.09□□□□□ -0.63
HIPK1-208ENST00000426820 REREQ9P2R6 1566 aa11.08□□□□□ -0.63
HIPK1-208ENST00000426820 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
HIPK1-208ENST00000426820 BRINP3Q76B58 766 aa11.08□□□□□ -0.64
HIPK1-208ENST00000426820 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
HIPK1-208ENST00000426820 PANK3Q9H999 370 aa11.07□□□□□ -0.64
HIPK1-208ENST00000426820 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
HIPK1-208ENST00000426820 RTF1Q92541 710 aaKnown RBP11.06□□□□□ -0.64
HIPK1-208ENST00000426820 TRPC5Q9UL62 973 aaPredicted RBP11.05□□□□□ -0.64
HIPK1-208ENST00000426820 SIRT1Q96EB6 747 aa11.05□□□□□ -0.64
HIPK1-208ENST00000426820 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
HIPK1-208ENST00000426820 JCADQ9P266 1359 aa11.05□□□□□ -0.64
HIPK1-208ENST00000426820 TET3O43151 1660 aa11.05□□□□□ -0.64
HIPK1-208ENST00000426820 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
HIPK1-208ENST00000426820 CEP152O94986 1710 aa11.04□□□□□ -0.64
HIPK1-208ENST00000426820 C1orf141Q5JVX7 400 aa11.04□□□□□ -0.64
HIPK1-208ENST00000426820 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
HIPK1-208ENST00000426820 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
HIPK1-208ENST00000426820 ADGRB3O60242 1522 aa11.03□□□□□ -0.64
HIPK1-208ENST00000426820 TRPM2O94759 1503 aa11.03□□□□□ -0.64
HIPK1-208ENST00000426820 LMTK2Q8IWU2 1503 aa11.03□□□□□ -0.64
HIPK1-208ENST00000426820 ARHGEF10O15013 1369 aa11.03□□□□□ -0.64
HIPK1-208ENST00000426820 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
HIPK1-208ENST00000426820 ROBO2Q9HCK4 1378 aa11.02□□□□□ -0.64
HIPK1-208ENST00000426820 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.64
HIPK1-208ENST00000426820 TATP17735 454 aaPredicted RBP11.02□□□□□ -0.64
HIPK1-208ENST00000426820 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.64
HIPK1-208ENST00000426820 ADAMTSL3P82987 1691 aa11.02□□□□□ -0.65
HIPK1-208ENST00000426820 EXOC5O00471 708 aa11.02□□□□□ -0.65
HIPK1-208ENST00000426820 NEUROD2Q15784 382 aa11.02□□□□□ -0.65
HIPK1-208ENST00000426820 SALL2Q9Y467 1007 aaPredicted RBP11.02□□□□□ -0.65
HIPK1-208ENST00000426820 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
HIPK1-208ENST00000426820 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
HIPK1-208ENST00000426820 CPS1P31327 1500 aa11□□□□□ -0.65
HIPK1-208ENST00000426820 NME9Q86XW9 330 aa11□□□□□ -0.65
HIPK1-208ENST00000426820 SPATA31D1Q6ZQQ2 1576 aa11□□□□□ -0.65
HIPK1-208ENST00000426820 AFF2P51816 1311 aa11□□□□□ -0.65
HIPK1-208ENST00000426820 SPATA31A6Q5VVP1 1343 aa11□□□□□ -0.65
HIPK1-208ENST00000426820 PLEKHH1Q9ULM0 1364 aa10.99□□□□□ -0.65
HIPK1-208ENST00000426820 PREX1Q8TCU6 1659 aa10.99□□□□□ -0.65
HIPK1-208ENST00000426820 GCP02774 474 aa10.99□□□□□ -0.65
HIPK1-208ENST00000426820 LAS1LQ9Y4W2 734 aaKnown RBP10.99□□□□□ -0.65
HIPK1-208ENST00000426820 C3P01024 1663 aa10.99□□□□□ -0.65
HIPK1-208ENST00000426820 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
HIPK1-208ENST00000426820 PPIP5K1Q6PFW1 1433 aa10.98□□□□□ -0.65
HIPK1-208ENST00000426820 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
HIPK1-208ENST00000426820 RNF17Q9BXT8 1623 aaKnown RBP10.98□□□□□ -0.65
HIPK1-208ENST00000426820 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
HIPK1-208ENST00000426820 ADGRL3Q9HAR2 1447 aa10.97□□□□□ -0.65
HIPK1-208ENST00000426820 DDB1Q16531 1140 aa10.97□□□□□ -0.65
HIPK1-208ENST00000426820 TTC21BQ7Z4L5 1316 aa10.97□□□□□ -0.65
HIPK1-208ENST00000426820 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
HIPK1-208ENST00000426820 PIK3C2BO00750 1634 aa10.97□□□□□ -0.65
HIPK1-208ENST00000426820 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
HIPK1-208ENST00000426820 RRS1Q15050 365 aaKnown RBP10.97□□□□□ -0.65
HIPK1-208ENST00000426820 IQGAP3Q86VI3 1631 aa10.96□□□□□ -0.65
HIPK1-208ENST00000426820 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
HIPK1-208ENST00000426820 HMGB2P26583 209 aaKnown RBP10.96□□□□□ -0.65
HIPK1-208ENST00000426820 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.65
HIPK1-208ENST00000426820 CROCC2H7BZ55 1655 aa10.96□□□□□ -0.66
HIPK1-208ENST00000426820 TEFQ10587 303 aa10.96□□□□□ -0.66
HIPK1-208ENST00000426820 DIEXFQ68CQ4 756 aaKnown RBP10.96□□□□□ -0.66
HIPK1-208ENST00000426820 BCL11BQ9C0K0 894 aaPredicted RBP10.96□□□□□ -0.66
HIPK1-208ENST00000426820 BAG6P46379 1132 aa10.95□□□□□ -0.66
HIPK1-208ENST00000426820 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
HIPK1-208ENST00000426820 DIAPH1O60610 1272 aaKnown RBP10.94□□□□□ -0.66
HIPK1-208ENST00000426820 NBPF14Q5TI25 921 aa10.94□□□□□ -0.66
HIPK1-208ENST00000426820 SPG7Q9UQ90 795 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms