RNA–Protein interactions for RNA: ENST00000426385.3

PMP22-204, Transcript of peripheral myelin protein 22, human

TSL 2 BASIC

Gene PMP22, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-204	ENST00000426385	LAMC1	P11047	1609 aa		13.91	□□□□□ -0.18
PMP22-204	ENST00000426385	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.91	□□□□□ -0.18
PMP22-204	ENST00000426385	SHPRH	Q149N8	1683 aa		13.91	□□□□□ -0.18
PMP22-204	ENST00000426385	RGS12	O14924	1447 aa		13.9	□□□□□ -0.18
PMP22-204	ENST00000426385	PLEKHH1	Q9ULM0	1364 aa		13.89	□□□□□ -0.19
PMP22-204	ENST00000426385	TMEM132E	Q6IEE7	984 aa		13.89	□□□□□ -0.19
PMP22-204	ENST00000426385	NHSL1	Q5SYE7	1610 aa		13.89	□□□□□ -0.19
PMP22-204	ENST00000426385	DCC	P43146	1447 aa		13.89	□□□□□ -0.19
PMP22-204	ENST00000426385	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	HRC	P23327	699 aa		13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	ZRANB1	Q9UGI0	708 aa		13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	TECPR2	O15040	1411 aa		13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	ACIN1	Q9UKV3	1341 aa	Known RBP	13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	ADGRB1	O14514	1584 aa		13.88	□□□□□ -0.19
PMP22-204	ENST00000426385	DHX57	Q6P158	1386 aa	Known RBP	13.87	□□□□□ -0.19
PMP22-204	ENST00000426385	CDC42BPG	Q6DT37	1551 aa		13.87	□□□□□ -0.19
PMP22-204	ENST00000426385	LRPPRC	P42704	1394 aa	Known RBP	13.86	□□□□□ -0.19
PMP22-204	ENST00000426385	CFAP70	Q5T0N1	1121 aa		13.86	□□□□□ -0.19
PMP22-204	ENST00000426385	STK26	Q9P289	416 aa		13.86	□□□□□ -0.19
PMP22-204	ENST00000426385	USP21	Q9UK80	565 aa		13.86	□□□□□ -0.19
PMP22-204	ENST00000426385	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.86	□□□□□ -0.19
PMP22-204	ENST00000426385	PNPLA6	Q8IY17	1366 aa		13.84	□□□□□ -0.19
PMP22-204	ENST00000426385	WAPL	Q7Z5K2	1190 aa		13.84	□□□□□ -0.19
PMP22-204	ENST00000426385	FMN2	Q9NZ56	1722 aa		13.84	□□□□□ -0.19
PMP22-204	ENST00000426385	C1orf167	Q5SNV9	1468 aa		13.83	□□□□□ -0.2
PMP22-204	ENST00000426385	ORAI2	Q96SN7	254 aa		13.83	□□□□□ -0.2
PMP22-204	ENST00000426385	ATAD2	Q6PL18	1390 aa		13.83	□□□□□ -0.2
PMP22-204	ENST00000426385	C14orf93	Q9H972	538 aa	Known RBP	13.82	□□□□□ -0.2
PMP22-204	ENST00000426385	KDM2A	Q9Y2K7	1162 aa		13.82	□□□□□ -0.2
PMP22-204	ENST00000426385	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.81	□□□□□ -0.2
PMP22-204	ENST00000426385	DCAF11	Q8TEB1	546 aa		13.81	□□□□□ -0.2
PMP22-204	ENST00000426385	TRPC5	Q9UL62	973 aa	Predicted RBP	13.81	□□□□□ -0.2
PMP22-204	ENST00000426385	ABCC11	Q96J66	1382 aa		13.81	□□□□□ -0.2
PMP22-204	ENST00000426385	RGPD8	O14715	1765 aa	Predicted RBP	13.81	□□□□□ -0.2
PMP22-204	ENST00000426385	USP32	Q8NFA0	1604 aa		13.79	□□□□□ -0.2
PMP22-204	ENST00000426385	DLC1	Q96QB1	1528 aa		13.79	□□□□□ -0.2
PMP22-204	ENST00000426385	NUTM2F	A1L443	756 aa		13.78	□□□□□ -0.2
PMP22-204	ENST00000426385	ADGRB2	O60241	1585 aa		13.77	□□□□□ -0.21
PMP22-204	ENST00000426385	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
PMP22-204	ENST00000426385	SIN3A	Q96ST3	1273 aa		13.77	□□□□□ -0.21
PMP22-204	ENST00000426385	EP400	Q96L91	3159 aa		13.77	□□□□□ -0.21
PMP22-204	ENST00000426385	KIAA1210	Q9ULL0	1709 aa		13.76	□□□□□ -0.21
PMP22-204	ENST00000426385	XPC	Q01831	940 aa	Predicted RBP	13.76	□□□□□ -0.21
PMP22-204	ENST00000426385	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.76	□□□□□ -0.21
PMP22-204	ENST00000426385	PRAM1	Q96QH2	718 aa		13.75	□□□□□ -0.21
PMP22-204	ENST00000426385	PLEKHG5	O94827	1062 aa		13.74	□□□□□ -0.21
PMP22-204	ENST00000426385	PXDN	Q92626	1479 aa		13.74	□□□□□ -0.21
PMP22-204	ENST00000426385	SOS2	Q07890	1332 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-204	ENST00000426385	TRPM1	Q7Z4N2	1603 aa		13.73	□□□□□ -0.21
PMP22-204	ENST00000426385	ESCO1	Q5FWF5	840 aa		13.73	□□□□□ -0.21
PMP22-204	ENST00000426385	DEFB132	Q7Z7B7	95 aa		13.73	□□□□□ -0.21
PMP22-204	ENST00000426385	TRAK1	Q9UPV9	953 aa		13.73	□□□□□ -0.21
PMP22-204	ENST00000426385	KIF1A	Q12756	1690 aa		13.72	□□□□□ -0.21
PMP22-204	ENST00000426385	TRIM26	Q12899	539 aa	Predicted RBP	13.72	□□□□□ -0.21
PMP22-204	ENST00000426385	CCDC125	Q86Z20	511 aa		13.72	□□□□□ -0.21
PMP22-204	ENST00000426385	GJD4	Q96KN9	370 aa	Predicted RBP	13.71	□□□□□ -0.21
PMP22-204	ENST00000426385	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.71	□□□□□ -0.21
PMP22-204	ENST00000426385	ATRN	O75882	1429 aa		13.71	□□□□□ -0.22
PMP22-204	ENST00000426385	FOXO3	O43524	673 aa		13.7	□□□□□ -0.22
PMP22-204	ENST00000426385	NEUROD1	Q13562	356 aa		13.7	□□□□□ -0.22
PMP22-204	ENST00000426385	NBPF1	Q3BBV0	1214 aa		13.7	□□□□□ -0.22
PMP22-204	ENST00000426385	L3MBTL2	Q969R5	705 aa		13.7	□□□□□ -0.22
PMP22-204	ENST00000426385	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.7	□□□□□ -0.22
PMP22-204	ENST00000426385	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.69	□□□□□ -0.22
PMP22-204	ENST00000426385	SIRT1	Q96EB6	747 aa		13.68	□□□□□ -0.22
PMP22-204	ENST00000426385	QRICH2	Q9H0J4	1663 aa		13.68	□□□□□ -0.22
PMP22-204	ENST00000426385	BCL9L	Q86UU0	1499 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	PRR36	Q9H6K5	1346 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	TOPAZ1	Q8N9V7	1692 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	PSD	A5PKW4	1024 aa	Predicted RBP	13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	POGK	Q9P215	609 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	TULP4	Q9NRJ4	1543 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	ABCA3	Q99758	1704 aa		13.67	□□□□□ -0.22
PMP22-204	ENST00000426385	SF3B2	Q13435	895 aa	Known RBP	13.66	□□□□□ -0.22
PMP22-204	ENST00000426385	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.66	□□□□□ -0.22
PMP22-204	ENST00000426385	UNC5CL	Q8IV45	518 aa		13.65	□□□□□ -0.22
PMP22-204	ENST00000426385	CCDC9	Q9Y3X0	531 aa	Known RBP	13.65	□□□□□ -0.22
PMP22-204	ENST00000426385	ATP7B	P35670	1465 aa		13.65	□□□□□ -0.22
PMP22-204	ENST00000426385	SEPT12	Q8IYM1	358 aa		13.64	□□□□□ -0.23
PMP22-204	ENST00000426385	ITSN1	Q15811	1721 aa		13.64	□□□□□ -0.23
PMP22-204	ENST00000426385	MARF1	Q9Y4F3	1742 aa	Known RBP	13.64	□□□□□ -0.23
PMP22-204	ENST00000426385	ANKAR	Q7Z5J8	1434 aa		13.64	□□□□□ -0.23
PMP22-204	ENST00000426385	NPHP3	Q7Z494	1330 aa		13.64	□□□□□ -0.23
PMP22-204	ENST00000426385	STAC3	Q96MF2	364 aa		13.63	□□□□□ -0.23
PMP22-204	ENST00000426385	HAP1	P54257	671 aa	Predicted RBP	13.62	□□□□□ -0.23
PMP22-204	ENST00000426385	NBPF8	Q3BBV2	869 aa		13.62	□□□□□ -0.23
PMP22-204	ENST00000426385	PMFBP1	Q8TBY8	1022 aa		13.62	□□□□□ -0.23
PMP22-204	ENST00000426385	CABLES1	Q8TDN4	633 aa		13.62	□□□□□ -0.23
PMP22-204	ENST00000426385	BLM	P54132	1417 aa	Predicted RBP	13.62	□□□□□ -0.23
PMP22-204	ENST00000426385	ALS2	Q96Q42	1657 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385		A0A0G2JS52	829 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385	MYT1	Q01538	1121 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385	PHF8	Q9UPP1	1060 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385	CRYBG1	Q9Y4K1	1723 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385	RALGAPB	Q86X10	1494 aa		13.61	□□□□□ -0.23
PMP22-204	ENST00000426385	WASL	O00401	505 aa	Predicted RBP	13.6	□□□□□ -0.23
PMP22-204	ENST00000426385	LMOD2	Q6P5Q4	547 aa		13.6	□□□□□ -0.23
PMP22-204	ENST00000426385	TNS3	Q68CZ2	1445 aa		13.59	□□□□□ -0.23
PMP22-204	ENST00000426385	KRT28	Q7Z3Y7	464 aa		13.59	□□□□□ -0.23
PMP22-204	ENST00000426385	KRT27	Q7Z3Y8	459 aa		13.58	□□□□□ -0.24

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