RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 EMP3P54852 163 aa8.47□□□□□ -1.05
HERPUD2-204ENST00000426180 SPNS2Q8IVW8 549 aa8.47□□□□□ -1.05
HERPUD2-204ENST00000426180 E9PCH4 1651 aa8.46□□□□□ -1.05
HERPUD2-204ENST00000426180 ERVK-7P63135 1459 aa8.46□□□□□ -1.05
HERPUD2-204ENST00000426180 PLA2R1Q13018 1463 aa8.46□□□□□ -1.05
HERPUD2-204ENST00000426180 SPATA31D1Q6ZQQ2 1576 aa8.45□□□□□ -1.06
HERPUD2-204ENST00000426180 MMRN1Q13201 1228 aa8.45□□□□□ -1.06
HERPUD2-204ENST00000426180 TNRQ92752 1358 aa8.45□□□□□ -1.06
HERPUD2-204ENST00000426180 NOS1P29475 1434 aa8.45□□□□□ -1.06
HERPUD2-204ENST00000426180 SYNMO15061 1565 aa8.44□□□□□ -1.06
HERPUD2-204ENST00000426180 UGGT1Q9NYU2 1555 aa8.44□□□□□ -1.06
HERPUD2-204ENST00000426180 PTPRTO14522 1441 aa8.44□□□□□ -1.06
HERPUD2-204ENST00000426180 RPRD2Q5VT52 1461 aaKnown RBP8.44□□□□□ -1.06
HERPUD2-204ENST00000426180 PREX1Q8TCU6 1659 aa8.43□□□□□ -1.06
HERPUD2-204ENST00000426180 DHX57Q6P158 1386 aaKnown RBP8.43□□□□□ -1.06
HERPUD2-204ENST00000426180 FAM205CA6NFA0 338 aa8.42□□□□□ -1.06
HERPUD2-204ENST00000426180 IDI1Q13907 227 aa8.42□□□□□ -1.06
HERPUD2-204ENST00000426180 EFCAB3Q8N7B9 438 aa8.42□□□□□ -1.06
HERPUD2-204ENST00000426180 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
HERPUD2-204ENST00000426180 MYO3AQ8NEV4 1616 aa8.41□□□□□ -1.06
HERPUD2-204ENST00000426180 ANKRD30BQ9BXX2 1392 aa8.41□□□□□ -1.06
HERPUD2-204ENST00000426180 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
HERPUD2-204ENST00000426180 TRPM2O94759 1503 aa8.4□□□□□ -1.06
HERPUD2-204ENST00000426180 LMTK3Q96Q04 1460 aa8.4□□□□□ -1.06
HERPUD2-204ENST00000426180 UHRF1BP1Q6BDS2 1440 aa8.4□□□□□ -1.06
HERPUD2-204ENST00000426180 HSPA2P54652 639 aa8.4□□□□□ -1.06
HERPUD2-204ENST00000426180 A2ML1A8K2U0 1454 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 CFAP65Q6ZU64 1925 aaKnown RBP8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 POTEB3A0JP26 581 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 POTEBQ6S5H4 581 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 ZNF710Q8N1W2 664 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 PIK3C2BO00750 1634 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 CLTCL1P53675 1640 aa8.39□□□□□ -1.07
HERPUD2-204ENST00000426180 NLRP1Q9C000 1473 aa8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 SPHKAPQ2M3C7 1700 aa8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 HOXB3P14651 431 aaPredicted RBP8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 SIN3AQ96ST3 1273 aa8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 SLC52A1Q9NWF4 448 aa8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 CEP170BQ9Y4F5 1589 aaPredicted RBP8.38□□□□□ -1.07
HERPUD2-204ENST00000426180 CCDC144AA2RUR9 1427 aa8.37□□□□□ -1.07
HERPUD2-204ENST00000426180 ZNF142P52746 1687 aaPredicted RBP8.37□□□□□ -1.07
HERPUD2-204ENST00000426180 ADGRB3O60242 1522 aa8.36□□□□□ -1.07
HERPUD2-204ENST00000426180 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
HERPUD2-204ENST00000426180 TMEM131LA2VDJ0 1609 aa8.36□□□□□ -1.07
HERPUD2-204ENST00000426180 NCKAP5LQ9HCH0 1330 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 UBR1Q8IWV7 1749 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 SOX12O15370 315 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 HOXB1P14653 301 aaPredicted RBP8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 LTKP29376 864 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 SPATA31E1Q6ZUB1 1445 aa8.35□□□□□ -1.07
HERPUD2-204ENST00000426180 NEUROD1Q13562 356 aa8.34□□□□□ -1.07
HERPUD2-204ENST00000426180 RGL3Q3MIN7 710 aa8.34□□□□□ -1.07
HERPUD2-204ENST00000426180 THEMISQ8N1K5 641 aaPredicted RBP8.34□□□□□ -1.07
HERPUD2-204ENST00000426180 TMEM2Q9UHN6 1383 aa8.34□□□□□ -1.07
HERPUD2-204ENST00000426180 ARHGAP23Q9P227 1491 aa8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 ZFYVE9O95405 1425 aa8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 ZNF326Q5BKZ1 582 aaKnown RBP8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 CCER1Q8TC90 406 aaPredicted RBP8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 RIMS2Q9UQ26 1411 aa8.33□□□□□ -1.08
HERPUD2-204ENST00000426180 ERBB3P21860 1342 aa8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 SETD1BQ9UPS6 1966 aaKnown RBP8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 VGFO15240 615 aaPredicted RBP8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 TXNDC2Q86VQ3 553 aa8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 MICALL2Q8IY33 904 aa8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 SLIT1O75093 1534 aa8.32□□□□□ -1.08
HERPUD2-204ENST00000426180 MYO5BQ9ULV0 1848 aa8.31□□□□□ -1.08
HERPUD2-204ENST00000426180 NEXMIFQ5QGS0 1516 aa8.31□□□□□ -1.08
HERPUD2-204ENST00000426180 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
HERPUD2-204ENST00000426180 KDM5AP29375 1690 aaKnown RBP8.3□□□□□ -1.08
HERPUD2-204ENST00000426180 ANKLE2Q86XL3 938 aa8.3□□□□□ -1.08
HERPUD2-204ENST00000426180 SCAF11Q99590 1463 aaKnown RBP8.3□□□□□ -1.08
HERPUD2-204ENST00000426180 NEURL4Q96JN8 1562 aa8.3□□□□□ -1.08
HERPUD2-204ENST00000426180 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
HERPUD2-204ENST00000426180 ADGRF5Q8IZF2 1346 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 L3MBTL2Q969R5 705 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 EID1Q9Y6B2 187 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 KIF1BO60333 1816 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 RPGRIP1LQ68CZ1 1315 aa8.29□□□□□ -1.08
HERPUD2-204ENST00000426180 PPP1R15AO75807 674 aaPredicted RBP8.28□□□□□ -1.08
HERPUD2-204ENST00000426180 DCAF11Q8TEB1 546 aa8.28□□□□□ -1.08
HERPUD2-204ENST00000426180 PHF8Q9UPP1 1060 aa8.28□□□□□ -1.08
HERPUD2-204ENST00000426180 NPHP4O75161 1426 aaPredicted RBP8.28□□□□□ -1.08
HERPUD2-204ENST00000426180 MED14O60244 1454 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 PLEKHG1Q9ULL1 1385 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 TMEM92Q6UXU6 159 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 MS4A4AQ96JQ5 239 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 SLC26A8Q96RN1 970 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 CLSPNQ9HAW4 1339 aa8.27□□□□□ -1.09
HERPUD2-204ENST00000426180 PPLO60437 1756 aa8.26□□□□□ -1.09
HERPUD2-204ENST00000426180 ZSWIM6Q9HCJ5 1215 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms