RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
TPM3P4-201ENST00000425942 XRN1Q8IZH2 1706 aaKnown RBP13.11□□□□□ -0.31
TPM3P4-201ENST00000425942 KIAA1210Q9ULL0 1709 aa13.11□□□□□ -0.31
TPM3P4-201ENST00000425942 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
TPM3P4-201ENST00000425942 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
TPM3P4-201ENST00000425942 STRCP1A6NGW2 1772 aa13.1□□□□□ -0.31
TPM3P4-201ENST00000425942 DCBLD2Q96PD2 775 aa13.1□□□□□ -0.31
TPM3P4-201ENST00000425942 PIK3R4Q99570 1358 aa13.09□□□□□ -0.31
TPM3P4-201ENST00000425942 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
TPM3P4-201ENST00000425942 TXNDC2Q86VQ3 553 aa13.09□□□□□ -0.31
TPM3P4-201ENST00000425942 MS4A3Q96HJ5 214 aa13.09□□□□□ -0.31
TPM3P4-201ENST00000425942 NCKAP5LQ9HCH0 1330 aa13.09□□□□□ -0.31
TPM3P4-201ENST00000425942 PRAG1Q86YV5 1406 aa13.08□□□□□ -0.32
TPM3P4-201ENST00000425942 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
TPM3P4-201ENST00000425942 PIK3C2GO75747 1445 aa13.07□□□□□ -0.32
TPM3P4-201ENST00000425942 ADAMTS13Q76LX8 1427 aa13.07□□□□□ -0.32
TPM3P4-201ENST00000425942 LTKP29376 864 aa13.07□□□□□ -0.32
TPM3P4-201ENST00000425942 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
TPM3P4-201ENST00000425942 ALKQ9UM73 1620 aa13.06□□□□□ -0.32
TPM3P4-201ENST00000425942 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
TPM3P4-201ENST00000425942 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
TPM3P4-201ENST00000425942 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
TPM3P4-201ENST00000425942 XIRP1Q702N8 1843 aaKnown RBP13.06□□□□□ -0.32
TPM3P4-201ENST00000425942 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
TPM3P4-201ENST00000425942 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
TPM3P4-201ENST00000425942 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
TPM3P4-201ENST00000425942 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
TPM3P4-201ENST00000425942 PTCH1Q13635 1447 aa13.02□□□□□ -0.33
TPM3P4-201ENST00000425942 ASXL1Q8IXJ9 1541 aa13.02□□□□□ -0.33
TPM3P4-201ENST00000425942 MAP3K13O43283 966 aa13.01□□□□□ -0.33
TPM3P4-201ENST00000425942 TRPM1Q7Z4N2 1603 aa13.01□□□□□ -0.33
TPM3P4-201ENST00000425942 IFNLR1Q8IU57 520 aaPredicted RBP13□□□□□ -0.33
TPM3P4-201ENST00000425942 TBX22Q9Y458 520 aa13□□□□□ -0.33
TPM3P4-201ENST00000425942 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
TPM3P4-201ENST00000425942 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 TECPR2O15040 1411 aa12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 NALCNQ8IZF0 1738 aa12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 ARHGEF28Q8N1W1 1705 aaKnown RBP12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 DLC1Q96QB1 1528 aa12.98□□□□□ -0.33
TPM3P4-201ENST00000425942 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
TPM3P4-201ENST00000425942 BCANQ96GW7 911 aa12.96□□□□□ -0.33
TPM3P4-201ENST00000425942 KCNA6P17658 529 aa12.95□□□□□ -0.34
TPM3P4-201ENST00000425942 RGL3Q3MIN7 710 aa12.95□□□□□ -0.34
TPM3P4-201ENST00000425942 TRPC6Q9Y210 931 aa12.95□□□□□ -0.34
TPM3P4-201ENST00000425942 DCCP43146 1447 aa12.95□□□□□ -0.34
TPM3P4-201ENST00000425942 TONSLQ96HA7 1378 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 ADGRF5Q8IZF2 1346 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 SLC26A8Q96RN1 970 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
TPM3P4-201ENST00000425942 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.93□□□□□ -0.34
TPM3P4-201ENST00000425942 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
TPM3P4-201ENST00000425942 METP08581 1390 aa12.93□□□□□ -0.34
TPM3P4-201ENST00000425942 ASTLQ6HA08 431 aaPredicted RBP12.92□□□□□ -0.34
TPM3P4-201ENST00000425942 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
TPM3P4-201ENST00000425942 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
TPM3P4-201ENST00000425942 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
TPM3P4-201ENST00000425942 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
TPM3P4-201ENST00000425942 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
TPM3P4-201ENST00000425942 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
TPM3P4-201ENST00000425942 PCDHB13Q9Y5F0 798 aa12.91□□□□□ -0.34
TPM3P4-201ENST00000425942 ADGRL3Q9HAR2 1447 aa12.9□□□□□ -0.34
TPM3P4-201ENST00000425942 ATMINO43313 823 aaPredicted RBP12.9□□□□□ -0.34
TPM3P4-201ENST00000425942 DCAF11Q8TEB1 546 aa12.9□□□□□ -0.34
TPM3P4-201ENST00000425942 ABCC11Q96J66 1382 aa12.9□□□□□ -0.34
TPM3P4-201ENST00000425942 PYGBP11216 843 aa12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 LHX8Q68G74 356 aa12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 C14orf93Q9H972 538 aaKnown RBP12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 TMEM94Q12767 1356 aa12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
TPM3P4-201ENST00000425942 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
TPM3P4-201ENST00000425942 FMN2Q9NZ56 1722 aa12.88□□□□□ -0.35
TPM3P4-201ENST00000425942 MSH6P52701 1360 aa12.88□□□□□ -0.35
TPM3P4-201ENST00000425942 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
TPM3P4-201ENST00000425942 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
TPM3P4-201ENST00000425942 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
TPM3P4-201ENST00000425942 BMP2KQ9NSY1 1161 aaPredicted RBP12.87□□□□□ -0.35
TPM3P4-201ENST00000425942 GPRASP1Q5JY77 1395 aa12.86□□□□□ -0.35
TPM3P4-201ENST00000425942 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
TPM3P4-201ENST00000425942 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
TPM3P4-201ENST00000425942 AMOTL2Q9Y2J4 779 aa12.86□□□□□ -0.35
TPM3P4-201ENST00000425942 KIF1AQ12756 1690 aa12.86□□□□□ -0.35
TPM3P4-201ENST00000425942 ATN1P54259 1190 aaPredicted RBP12.85□□□□□ -0.35
TPM3P4-201ENST00000425942 GSE1Q14687 1217 aa12.85□□□□□ -0.35
TPM3P4-201ENST00000425942 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
TPM3P4-201ENST00000425942 ROBO1Q9Y6N7 1651 aa12.85□□□□□ -0.35
TPM3P4-201ENST00000425942 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
TPM3P4-201ENST00000425942 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
TPM3P4-201ENST00000425942 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
TPM3P4-201ENST00000425942 NHSL1Q5SYE7 1610 aa12.84□□□□□ -0.35
TPM3P4-201ENST00000425942 EIF3AQ14152 1382 aaKnown RBP12.83□□□□□ -0.36
TPM3P4-201ENST00000425942 TIE1P35590 1138 aa12.83□□□□□ -0.36
TPM3P4-201ENST00000425942 CFAP70Q5T0N1 1121 aa12.83□□□□□ -0.36
TPM3P4-201ENST00000425942 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
TPM3P4-201ENST00000425942 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
TPM3P4-201ENST00000425942 ROCK2O75116 1388 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms