RNA–Protein interactions for RNA: ENST00000425483.1

LINC00454-201, long intergenic non-protein coding RNA 454, humanhuman

TSL 3 BASIC

Gene LINC00454, Length 503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00454-201ENST00000425483 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
LINC00454-201ENST00000425483 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
LINC00454-201ENST00000425483 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
LINC00454-201ENST00000425483 ORAI2Q96SN7 254 aa16.72■□□□□ 0.27
LINC00454-201ENST00000425483 MEX3CQ5U5Q3 659 aaKnown RBP16.71■□□□□ 0.27
LINC00454-201ENST00000425483 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
LINC00454-201ENST00000425483 LAMC1P11047 1609 aa16.7■□□□□ 0.26
LINC00454-201ENST00000425483 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
LINC00454-201ENST00000425483 KNDC1Q76NI1 1749 aa16.7■□□□□ 0.26
LINC00454-201ENST00000425483 LRP6O75581 1613 aa16.7■□□□□ 0.26
LINC00454-201ENST00000425483 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
LINC00454-201ENST00000425483 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
LINC00454-201ENST00000425483 SOS2Q07890 1332 aaPredicted RBP16.68■□□□□ 0.26
LINC00454-201ENST00000425483 NUTM2BA6NNL0 878 aaPredicted RBP16.67■□□□□ 0.26
LINC00454-201ENST00000425483 NUTM2EB1AL46 878 aaPredicted RBP16.67■□□□□ 0.26
LINC00454-201ENST00000425483 NUTM2AQ8IVF1 878 aaPredicted RBP16.67■□□□□ 0.26
LINC00454-201ENST00000425483 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
LINC00454-201ENST00000425483 NPHP3Q7Z494 1330 aa16.67■□□□□ 0.26
LINC00454-201ENST00000425483 PNPLA6Q8IY17 1366 aa16.66■□□□□ 0.26
LINC00454-201ENST00000425483 NUTM2FA1L443 756 aa16.66■□□□□ 0.26
LINC00454-201ENST00000425483 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
LINC00454-201ENST00000425483 POGKQ9P215 609 aa16.66■□□□□ 0.26
LINC00454-201ENST00000425483 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
LINC00454-201ENST00000425483 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
LINC00454-201ENST00000425483 SAFB2Q14151 953 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC00454-201ENST00000425483 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
LINC00454-201ENST00000425483 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
LINC00454-201ENST00000425483 FOXO3O43524 673 aa16.62■□□□□ 0.25
LINC00454-201ENST00000425483 PXDNQ92626 1479 aa16.59■□□□□ 0.25
LINC00454-201ENST00000425483 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
LINC00454-201ENST00000425483 XPCQ01831 940 aaPredicted RBP16.58■□□□□ 0.24
LINC00454-201ENST00000425483 PHF8Q9UPP1 1060 aa16.58■□□□□ 0.24
LINC00454-201ENST00000425483 AFF2P51816 1311 aa16.57■□□□□ 0.24
LINC00454-201ENST00000425483 C8orf37Q96NL8 207 aa16.57■□□□□ 0.24
LINC00454-201ENST00000425483 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
LINC00454-201ENST00000425483 EIF3AQ14152 1382 aaKnown RBP16.56■□□□□ 0.24
LINC00454-201ENST00000425483 MINK1Q8N4C8 1332 aaPredicted RBP16.56■□□□□ 0.24
LINC00454-201ENST00000425483 ADAMTS2O95450 1211 aa16.56■□□□□ 0.24
LINC00454-201ENST00000425483 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
LINC00454-201ENST00000425483 ADGRB2O60241 1585 aa16.55■□□□□ 0.24
LINC00454-201ENST00000425483 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
LINC00454-201ENST00000425483 KRT28Q7Z3Y7 464 aa16.54■□□□□ 0.24
LINC00454-201ENST00000425483 NGLY1Q96IV0 654 aa16.54■□□□□ 0.24
LINC00454-201ENST00000425483 WASLO00401 505 aaPredicted RBP16.53■□□□□ 0.24
LINC00454-201ENST00000425483 PSME1Q06323 249 aa16.53■□□□□ 0.24
LINC00454-201ENST00000425483 SPATA31A3Q5VYP0 1347 aa16.52■□□□□ 0.24
LINC00454-201ENST00000425483 RXRBP28702 533 aa16.52■□□□□ 0.24
LINC00454-201ENST00000425483 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
LINC00454-201ENST00000425483 SIN3AQ96ST3 1273 aa16.52■□□□□ 0.24
LINC00454-201ENST00000425483 COL22A1Q8NFW1 1626 aaPredicted RBP16.51■□□□□ 0.23
LINC00454-201ENST00000425483 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
LINC00454-201ENST00000425483 NBPF1Q3BBV0 1214 aa16.5■□□□□ 0.23
LINC00454-201ENST00000425483 PMFBP1Q8TBY8 1022 aa16.5■□□□□ 0.23
LINC00454-201ENST00000425483 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
LINC00454-201ENST00000425483 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
LINC00454-201ENST00000425483 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
LINC00454-201ENST00000425483 TRIM26Q12899 539 aaPredicted RBP16.49■□□□□ 0.23
LINC00454-201ENST00000425483 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
LINC00454-201ENST00000425483 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
LINC00454-201ENST00000425483 KIAA1210Q9ULL0 1709 aa16.48■□□□□ 0.23
LINC00454-201ENST00000425483 FNBP4Q8N3X1 1017 aaPredicted RBP16.48■□□□□ 0.23
LINC00454-201ENST00000425483 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
LINC00454-201ENST00000425483 USP21Q9UK80 565 aa16.47■□□□□ 0.23
LINC00454-201ENST00000425483 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
LINC00454-201ENST00000425483 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
LINC00454-201ENST00000425483 ARHGEF28Q8N1W1 1705 aaKnown RBP16.47■□□□□ 0.23
LINC00454-201ENST00000425483 LMOD2Q6P5Q4 547 aa16.46■□□□□ 0.23
LINC00454-201ENST00000425483 ARHGEF10O15013 1369 aa16.46■□□□□ 0.23
LINC00454-201ENST00000425483 CDK12Q9NYV4 1490 aaPredicted RBP16.46■□□□□ 0.23
LINC00454-201ENST00000425483 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
LINC00454-201ENST00000425483 NGDNQ8NEJ9 315 aaKnown RBP16.45■□□□□ 0.22
LINC00454-201ENST00000425483 NUDT16Q96DE0 195 aaKnown RBP16.45■□□□□ 0.22
LINC00454-201ENST00000425483 ATP7BP35670 1465 aa16.44■□□□□ 0.22
LINC00454-201ENST00000425483 CDK19Q9BWU1 502 aa16.44■□□□□ 0.22
LINC00454-201ENST00000425483 TRPC5Q9UL62 973 aaPredicted RBP16.44■□□□□ 0.22
LINC00454-201ENST00000425483 CENPJQ9HC77 1338 aaPredicted RBP16.44■□□□□ 0.22
LINC00454-201ENST00000425483 RGPD8O14715 1765 aaPredicted RBP16.42■□□□□ 0.22
LINC00454-201ENST00000425483 PLEKHG5O94827 1062 aa16.41■□□□□ 0.22
LINC00454-201ENST00000425483 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
LINC00454-201ENST00000425483 ATRNO75882 1429 aa16.41■□□□□ 0.22
LINC00454-201ENST00000425483 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
LINC00454-201ENST00000425483 RGS12O14924 1447 aa16.4■□□□□ 0.22
LINC00454-201ENST00000425483 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
LINC00454-201ENST00000425483 BCL9LQ86UU0 1499 aa16.4■□□□□ 0.22
LINC00454-201ENST00000425483 PAK3O75914 559 aaPredicted RBP16.38■□□□□ 0.21
LINC00454-201ENST00000425483 SRPK2P78362 688 aaKnown RBP16.38■□□□□ 0.21
LINC00454-201ENST00000425483 UNC5CLQ8IV45 518 aa16.38■□□□□ 0.21
LINC00454-201ENST00000425483 SLIT2O94813 1529 aa16.38■□□□□ 0.21
LINC00454-201ENST00000425483 TONSLQ96HA7 1378 aa16.38■□□□□ 0.21
LINC00454-201ENST00000425483 POLR3AO14802 1390 aaPredicted RBP16.37■□□□□ 0.21
LINC00454-201ENST00000425483 PLEKHG3A1L390 1219 aa16.36■□□□□ 0.21
LINC00454-201ENST00000425483 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
LINC00454-201ENST00000425483 ACEP12821 1306 aa16.36■□□□□ 0.21
LINC00454-201ENST00000425483 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
LINC00454-201ENST00000425483 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC00454-201ENST00000425483 GJD4Q96KN9 370 aaPredicted RBP16.35■□□□□ 0.21
LINC00454-201ENST00000425483 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
LINC00454-201ENST00000425483 ITSN1Q15811 1721 aa16.35■□□□□ 0.21
LINC00454-201ENST00000425483 TRPM3Q9HCF6 1732 aaPredicted RBP16.35■□□□□ 0.21
LINC00454-201ENST00000425483 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms