RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SF3B2Q13435 895 aaKnown RBP19.08■□□□□ 0.64
SGCE-203ENST00000425444 LAMC1P11047 1609 aa19.07■□□□□ 0.64
SGCE-203ENST00000425444 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
SGCE-203ENST00000425444 ZNF326Q5BKZ1 582 aaKnown RBP19.05■□□□□ 0.64
SGCE-203ENST00000425444 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
SGCE-203ENST00000425444 PSDA5PKW4 1024 aaPredicted RBP19.03■□□□□ 0.64
SGCE-203ENST00000425444 MYOM2P54296 1465 aa19.03■□□□□ 0.64
SGCE-203ENST00000425444 HRCP23327 699 aa19■□□□□ 0.63
SGCE-203ENST00000425444 RALGAPBQ86X10 1494 aa19■□□□□ 0.63
SGCE-203ENST00000425444 UNC5CLQ8IV45 518 aa18.99■□□□□ 0.63
SGCE-203ENST00000425444 SLC4A1APQ9BWU0 796 aaKnown RBP18.99■□□□□ 0.63
SGCE-203ENST00000425444 MARF1Q9Y4F3 1742 aaKnown RBP18.99■□□□□ 0.63
SGCE-203ENST00000425444 BRWD3Q6RI45 1802 aa18.98■□□□□ 0.63
SGCE-203ENST00000425444 NPHP3Q7Z494 1330 aa18.98■□□□□ 0.63
SGCE-203ENST00000425444 CLTCL1P53675 1640 aa18.97■□□□□ 0.63
SGCE-203ENST00000425444 GLI3P10071 1580 aa18.97■□□□□ 0.63
SGCE-203ENST00000425444 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
SGCE-203ENST00000425444 SEPT12Q8IYM1 358 aa18.96■□□□□ 0.63
SGCE-203ENST00000425444 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.95■□□□□ 0.62
SGCE-203ENST00000425444 ESCO1Q5FWF5 840 aa18.95■□□□□ 0.62
SGCE-203ENST00000425444 ROBO2Q9HCK4 1378 aa18.93■□□□□ 0.62
SGCE-203ENST00000425444 FOXO3O43524 673 aa18.93■□□□□ 0.62
SGCE-203ENST00000425444 PXDNQ92626 1479 aa18.92■□□□□ 0.62
SGCE-203ENST00000425444 BAG6P46379 1132 aa18.92■□□□□ 0.62
SGCE-203ENST00000425444 SLIT2O94813 1529 aa18.91■□□□□ 0.62
SGCE-203ENST00000425444 KRT27Q7Z3Y8 459 aa18.91■□□□□ 0.62
SGCE-203ENST00000425444 KIF1BO60333 1816 aa18.9■□□□□ 0.62
SGCE-203ENST00000425444 YY1P25490 414 aa18.89■□□□□ 0.61
SGCE-203ENST00000425444 CCDC9Q9Y3X0 531 aaKnown RBP18.89■□□□□ 0.61
SGCE-203ENST00000425444 LRPPRCP42704 1394 aaKnown RBP18.87■□□□□ 0.61
SGCE-203ENST00000425444 R3HDM1Q15032 1099 aaKnown RBP18.87■□□□□ 0.61
SGCE-203ENST00000425444 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
SGCE-203ENST00000425444 ACIN1Q9UKV3 1341 aaKnown RBP18.86■□□□□ 0.61
SGCE-203ENST00000425444 A0A0G2JS52 829 aa18.86■□□□□ 0.61
SGCE-203ENST00000425444 MYT1Q01538 1121 aa18.86■□□□□ 0.61
SGCE-203ENST00000425444 VPS72Q15906 364 aa18.86■□□□□ 0.61
SGCE-203ENST00000425444 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
SGCE-203ENST00000425444 CCDC144AA2RUR9 1427 aa18.84■□□□□ 0.61
SGCE-203ENST00000425444 ONECUT3O60422 494 aaPredicted RBP18.84■□□□□ 0.61
SGCE-203ENST00000425444 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
SGCE-203ENST00000425444 EN1Q05925 392 aaPredicted RBP18.84■□□□□ 0.61
SGCE-203ENST00000425444 NUTM2FA1L443 756 aa18.83■□□□□ 0.6
SGCE-203ENST00000425444 RAB3GAP2Q9H2M9 1393 aa18.82■□□□□ 0.6
SGCE-203ENST00000425444 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
SGCE-203ENST00000425444 SPATA31A3Q5VYP0 1347 aa18.81■□□□□ 0.6
SGCE-203ENST00000425444 PLEKHG5O94827 1062 aa18.81■□□□□ 0.6
SGCE-203ENST00000425444 CDC42BPGQ6DT37 1551 aa18.81■□□□□ 0.6
SGCE-203ENST00000425444 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SGCE-203ENST00000425444 PRAG1Q86YV5 1406 aa18.8■□□□□ 0.6
SGCE-203ENST00000425444 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
SGCE-203ENST00000425444 FAM98CQ17RN3 349 aaKnown RBP18.77■□□□□ 0.6
SGCE-203ENST00000425444 CABLES1Q8TDN4 633 aa18.77■□□□□ 0.6
SGCE-203ENST00000425444 KRT28Q7Z3Y7 464 aa18.76■□□□□ 0.59
SGCE-203ENST00000425444 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
SGCE-203ENST00000425444 RGL3Q3MIN7 710 aa18.75■□□□□ 0.59
SGCE-203ENST00000425444 PLCH1Q4KWH8 1693 aa18.75■□□□□ 0.59
SGCE-203ENST00000425444 PPLO60437 1756 aa18.75■□□□□ 0.59
SGCE-203ENST00000425444 UTRNP46939 3433 aa18.75■□□□□ 0.59
SGCE-203ENST00000425444 FAM182BQ5T319 152 aa18.74■□□□□ 0.59
SGCE-203ENST00000425444 RGPD1P0DJD0 1748 aa18.74■□□□□ 0.59
SGCE-203ENST00000425444 EZH2Q15910 746 aaKnown RBP18.73■□□□□ 0.59
SGCE-203ENST00000425444 LMOD2Q6P5Q4 547 aa18.72■□□□□ 0.59
SGCE-203ENST00000425444 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
SGCE-203ENST00000425444 SPATA31E1Q6ZUB1 1445 aa18.72■□□□□ 0.59
SGCE-203ENST00000425444 STK26Q9P289 416 aa18.71■□□□□ 0.59
SGCE-203ENST00000425444 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
SGCE-203ENST00000425444 DCAF8L1A6NGE4 600 aa18.7■□□□□ 0.58
SGCE-203ENST00000425444 PSME1Q06323 249 aa18.7■□□□□ 0.58
SGCE-203ENST00000425444 TNS3Q68CZ2 1445 aa18.7■□□□□ 0.58
SGCE-203ENST00000425444 ANKRD30BQ9BXX2 1392 aa18.69■□□□□ 0.58
SGCE-203ENST00000425444 DISP2A7MBM2 1401 aa18.69■□□□□ 0.58
SGCE-203ENST00000425444 KIF1AQ12756 1690 aa18.69■□□□□ 0.58
SGCE-203ENST00000425444 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
SGCE-203ENST00000425444 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
SGCE-203ENST00000425444 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
SGCE-203ENST00000425444 CAMKK2Q96RR4 588 aa18.66■□□□□ 0.58
SGCE-203ENST00000425444 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
SGCE-203ENST00000425444 PHF8Q9UPP1 1060 aa18.65■□□□□ 0.58
SGCE-203ENST00000425444 TNS1Q9HBL0 1735 aaKnown RBP18.65■□□□□ 0.58
SGCE-203ENST00000425444 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
SGCE-203ENST00000425444 TRIM37O94972 964 aa18.64■□□□□ 0.57
SGCE-203ENST00000425444 ARHGEF10O15013 1369 aa18.64■□□□□ 0.57
SGCE-203ENST00000425444 ABCA3Q99758 1704 aa18.63■□□□□ 0.57
SGCE-203ENST00000425444 PLEKHH1Q9ULM0 1364 aa18.63■□□□□ 0.57
SGCE-203ENST00000425444 APBA3O96018 575 aa18.62■□□□□ 0.57
SGCE-203ENST00000425444 SBNO1A3KN83 1393 aa18.62■□□□□ 0.57
SGCE-203ENST00000425444 PIK3C2GO75747 1445 aa18.62■□□□□ 0.57
SGCE-203ENST00000425444 NRAPQ86VF7 1730 aa18.62■□□□□ 0.57
SGCE-203ENST00000425444 ADGRB2O60241 1585 aa18.61■□□□□ 0.57
SGCE-203ENST00000425444 TECPR2O15040 1411 aa18.61■□□□□ 0.57
SGCE-203ENST00000425444 PARD3Q8TEW0 1356 aa18.6■□□□□ 0.57
SGCE-203ENST00000425444 CEP350Q5VT06 3117 aa18.6■□□□□ 0.57
SGCE-203ENST00000425444 SPATA31A5Q5VU36 1347 aa18.6■□□□□ 0.57
SGCE-203ENST00000425444 SPATA31A7Q8IWB4 1347 aa18.6■□□□□ 0.57
SGCE-203ENST00000425444 SPON1Q9HCB6 807 aa18.6■□□□□ 0.57
SGCE-203ENST00000425444 NBPF8Q3BBV2 869 aa18.59■□□□□ 0.57
SGCE-203ENST00000425444 NBPF14Q5TI25 921 aa18.59■□□□□ 0.57
SGCE-203ENST00000425444 FAM196AQ6ZSG2 479 aa18.59■□□□□ 0.57
SGCE-203ENST00000425444 RGPD8O14715 1765 aaPredicted RBP18.59■□□□□ 0.57
SGCE-203ENST00000425444 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms