RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MROH2AA6NES4 1674 aa16.89■□□□□ 0.29
COL12A1-205ENST00000425443 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
COL12A1-205ENST00000425443 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
COL12A1-205ENST00000425443 PIK3C2GO75747 1445 aa16.89■□□□□ 0.29
COL12A1-205ENST00000425443 RGS3P49796 1198 aa16.89■□□□□ 0.29
COL12A1-205ENST00000425443 SAFB2Q14151 953 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL12A1-205ENST00000425443 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
COL12A1-205ENST00000425443 CYB5RLQ6IPT4 315 aa16.88■□□□□ 0.29
COL12A1-205ENST00000425443 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.88■□□□□ 0.29
COL12A1-205ENST00000425443 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
COL12A1-205ENST00000425443 GLIPR1L2Q4G1C9 344 aa16.86■□□□□ 0.29
COL12A1-205ENST00000425443 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
COL12A1-205ENST00000425443 STK26Q9P289 416 aa16.86■□□□□ 0.29
COL12A1-205ENST00000425443 ADGRB3O60242 1522 aa16.85■□□□□ 0.29
COL12A1-205ENST00000425443 BCAR3O75815 825 aa16.85■□□□□ 0.29
COL12A1-205ENST00000425443 RRP7AQ9Y3A4 280 aaKnown RBP16.85■□□□□ 0.29
COL12A1-205ENST00000425443 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
COL12A1-205ENST00000425443 FRMPD1Q5SYB0 1578 aa16.84■□□□□ 0.29
COL12A1-205ENST00000425443 NSD3Q9BZ95 1437 aa16.84■□□□□ 0.29
COL12A1-205ENST00000425443 TRMT2AQ8IZ69 625 aaKnown RBP16.83■□□□□ 0.29
COL12A1-205ENST00000425443 SBNO2Q9Y2G9 1366 aa16.83■□□□□ 0.29
COL12A1-205ENST00000425443 ABCC3O15438 1527 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 NEO1Q92859 1461 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 EVC2Q86UK5 1308 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 NRXN1Q9ULB1 1477 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 IDI1Q13907 227 aa16.83■□□□□ 0.28
COL12A1-205ENST00000425443 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
COL12A1-205ENST00000425443 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
COL12A1-205ENST00000425443 CANXP27824 592 aaKnown RBP16.81■□□□□ 0.28
COL12A1-205ENST00000425443 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
COL12A1-205ENST00000425443 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
COL12A1-205ENST00000425443 AAMPQ13685 434 aa16.8■□□□□ 0.28
COL12A1-205ENST00000425443 CFAP53Q96M91 514 aa16.8■□□□□ 0.28
COL12A1-205ENST00000425443 FRAT1Q92837 279 aaPredicted RBP16.79■□□□□ 0.28
COL12A1-205ENST00000425443 CABP2Q9NPB3 220 aa16.79■□□□□ 0.28
COL12A1-205ENST00000425443 E9PSI1 815 aa16.79■□□□□ 0.28
COL12A1-205ENST00000425443 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
COL12A1-205ENST00000425443 SLC52A1Q9NWF4 448 aa16.79■□□□□ 0.28
COL12A1-205ENST00000425443 PPLO60437 1756 aa16.78■□□□□ 0.28
COL12A1-205ENST00000425443 IGHDP01880 384 aa16.77■□□□□ 0.28
COL12A1-205ENST00000425443 FAM69CQ0P6D2 419 aa16.77■□□□□ 0.28
COL12A1-205ENST00000425443 POGKQ9P215 609 aa16.77■□□□□ 0.28
COL12A1-205ENST00000425443 MTHFSP49914 203 aa16.77■□□□□ 0.27
COL12A1-205ENST00000425443 CAMSAP1Q5T5Y3 1602 aa16.77■□□□□ 0.27
COL12A1-205ENST00000425443 BCL2L13Q9BXK5 485 aa16.76■□□□□ 0.27
COL12A1-205ENST00000425443 NKTRP30414 1462 aaKnown RBP16.76■□□□□ 0.27
COL12A1-205ENST00000425443 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
COL12A1-205ENST00000425443 YEATS2Q9ULM3 1422 aa16.76■□□□□ 0.27
COL12A1-205ENST00000425443 QRICH2Q9H0J4 1663 aa16.76■□□□□ 0.27
COL12A1-205ENST00000425443 NGEFQ8N5V2 710 aa16.75■□□□□ 0.27
COL12A1-205ENST00000425443 POLR3AO14802 1390 aaPredicted RBP16.75■□□□□ 0.27
COL12A1-205ENST00000425443 MYO3AQ8NEV4 1616 aa16.75■□□□□ 0.27
COL12A1-205ENST00000425443 DIP2CQ9Y2E4 1556 aa16.74■□□□□ 0.27
COL12A1-205ENST00000425443 DDRGK1Q96HY6 314 aa16.74■□□□□ 0.27
COL12A1-205ENST00000425443 USP35Q9P2H5 1018 aa16.74■□□□□ 0.27
COL12A1-205ENST00000425443 PPM1GO15355 546 aaPredicted RBP16.74■□□□□ 0.27
COL12A1-205ENST00000425443 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
COL12A1-205ENST00000425443 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
COL12A1-205ENST00000425443 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
COL12A1-205ENST00000425443 PANK1Q8TE04 598 aa16.73■□□□□ 0.27
COL12A1-205ENST00000425443 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
COL12A1-205ENST00000425443 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
COL12A1-205ENST00000425443 WWC1Q8IX03 1113 aa16.73■□□□□ 0.27
COL12A1-205ENST00000425443 COG6Q9Y2V7 657 aa16.73■□□□□ 0.27
COL12A1-205ENST00000425443 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
COL12A1-205ENST00000425443 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL12A1-205ENST00000425443 MLECQ14165 292 aa16.72■□□□□ 0.27
COL12A1-205ENST00000425443 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
COL12A1-205ENST00000425443 GLI2P10070 1586 aa16.71■□□□□ 0.27
COL12A1-205ENST00000425443 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
COL12A1-205ENST00000425443 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
COL12A1-205ENST00000425443 CLUAP1Q96AJ1 413 aa16.7■□□□□ 0.26
COL12A1-205ENST00000425443 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
COL12A1-205ENST00000425443 SEC24BO95487 1268 aa16.7■□□□□ 0.26
COL12A1-205ENST00000425443 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
COL12A1-205ENST00000425443 ANKRD36BQ8N2N9 1353 aa16.69■□□□□ 0.26
COL12A1-205ENST00000425443 ARHGAP31Q2M1Z3 1444 aa16.69■□□□□ 0.26
COL12A1-205ENST00000425443 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
COL12A1-205ENST00000425443 USP19O94966 1318 aa16.69■□□□□ 0.26
COL12A1-205ENST00000425443 NEXMIFQ5QGS0 1516 aa16.68■□□□□ 0.26
COL12A1-205ENST00000425443 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
COL12A1-205ENST00000425443 PUS7Q96PZ0 661 aaKnown RBP16.68■□□□□ 0.26
COL12A1-205ENST00000425443 TERF2IPQ9NYB0 399 aa16.68■□□□□ 0.26
COL12A1-205ENST00000425443 BRPF3Q9ULD4 1205 aa16.66■□□□□ 0.26
COL12A1-205ENST00000425443 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
COL12A1-205ENST00000425443 ESF1Q9H501 851 aaKnown RBP16.65■□□□□ 0.26
COL12A1-205ENST00000425443 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
COL12A1-205ENST00000425443 ZC3H13Q5T200 1668 aaKnown RBP16.64■□□□□ 0.25
COL12A1-205ENST00000425443 PIK3C2BO00750 1634 aa16.64■□□□□ 0.25
COL12A1-205ENST00000425443 RLBP1P12271 317 aa16.64■□□□□ 0.25
COL12A1-205ENST00000425443 HDGFL2Q7Z4V5 671 aaPredicted RBP16.64■□□□□ 0.25
COL12A1-205ENST00000425443 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
COL12A1-205ENST00000425443 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
COL12A1-205ENST00000425443 NSD2O96028 1365 aa16.64■□□□□ 0.25
COL12A1-205ENST00000425443 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.25
COL12A1-205ENST00000425443 GSE1Q14687 1217 aa16.63■□□□□ 0.25
COL12A1-205ENST00000425443 A0A1W2PP64 1363 aa16.63■□□□□ 0.25
COL12A1-205ENST00000425443 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
COL12A1-205ENST00000425443 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms