RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
ATG4B-209ENST00000425239 IFT172Q9UG01 1749 aa22.51■■□□□ 1.19
ATG4B-209ENST00000425239 COL22A1Q8NFW1 1626 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-209ENST00000425239 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
ATG4B-209ENST00000425239 CDC42BPGQ6DT37 1551 aa22.5■■□□□ 1.19
ATG4B-209ENST00000425239 SRCAPQ6ZRS2 3230 aa22.5■■□□□ 1.19
ATG4B-209ENST00000425239 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
ATG4B-209ENST00000425239 NGLY1Q96IV0 654 aa22.5■■□□□ 1.19
ATG4B-209ENST00000425239 CCDC144AA2RUR9 1427 aa22.49■■□□□ 1.19
ATG4B-209ENST00000425239 RGL3Q3MIN7 710 aa22.49■■□□□ 1.19
ATG4B-209ENST00000425239 ABCC11Q96J66 1382 aa22.49■■□□□ 1.19
ATG4B-209ENST00000425239 PXDNQ92626 1479 aa22.48■■□□□ 1.19
ATG4B-209ENST00000425239 LRPPRCP42704 1394 aaKnown RBP22.48■■□□□ 1.19
ATG4B-209ENST00000425239 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
ATG4B-209ENST00000425239 TMEM132EQ6IEE7 984 aa22.47■■□□□ 1.19
ATG4B-209ENST00000425239 EP400Q96L91 3159 aa22.47■■□□□ 1.19
ATG4B-209ENST00000425239 ANKRD30BQ9BXX2 1392 aa22.47■■□□□ 1.19
ATG4B-209ENST00000425239 MYOM2P54296 1465 aa22.47■■□□□ 1.19
ATG4B-209ENST00000425239 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
ATG4B-209ENST00000425239 PIK3C2GO75747 1445 aa22.46■■□□□ 1.19
ATG4B-209ENST00000425239 STK26Q9P289 416 aa22.45■■□□□ 1.18
ATG4B-209ENST00000425239 USP21Q9UK80 565 aa22.45■■□□□ 1.18
ATG4B-209ENST00000425239 NPHP3Q7Z494 1330 aa22.45■■□□□ 1.18
ATG4B-209ENST00000425239 FOXO3O43524 673 aa22.44■■□□□ 1.18
ATG4B-209ENST00000425239 KNDC1Q76NI1 1749 aa22.43■■□□□ 1.18
ATG4B-209ENST00000425239 BCL9LQ86UU0 1499 aa22.42■■□□□ 1.18
ATG4B-209ENST00000425239 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
ATG4B-209ENST00000425239 ATRNO75882 1429 aa22.41■■□□□ 1.18
ATG4B-209ENST00000425239 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
ATG4B-209ENST00000425239 XPCQ01831 940 aaPredicted RBP22.4■■□□□ 1.18
ATG4B-209ENST00000425239 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
ATG4B-209ENST00000425239 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
ATG4B-209ENST00000425239 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
ATG4B-209ENST00000425239 NUTM2FA1L443 756 aa22.39■■□□□ 1.17
ATG4B-209ENST00000425239 FMN2Q9NZ56 1722 aa22.38■■□□□ 1.17
ATG4B-209ENST00000425239 MARF1Q9Y4F3 1742 aaKnown RBP22.37■■□□□ 1.17
ATG4B-209ENST00000425239 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
ATG4B-209ENST00000425239 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.17
ATG4B-209ENST00000425239 RGPD8O14715 1765 aaPredicted RBP22.32■■□□□ 1.16
ATG4B-209ENST00000425239 ATAD2Q6PL18 1390 aa22.31■■□□□ 1.16
ATG4B-209ENST00000425239 SLIT2O94813 1529 aa22.31■■□□□ 1.16
ATG4B-209ENST00000425239 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
ATG4B-209ENST00000425239 GJD4Q96KN9 370 aaPredicted RBP22.3■■□□□ 1.16
ATG4B-209ENST00000425239 ACIN1Q9UKV3 1341 aaKnown RBP22.3■■□□□ 1.16
ATG4B-209ENST00000425239 KIF1AQ12756 1690 aa22.29■■□□□ 1.16
ATG4B-209ENST00000425239 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.28■■□□□ 1.16
ATG4B-209ENST00000425239 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
ATG4B-209ENST00000425239 UNC5CLQ8IV45 518 aa22.26■■□□□ 1.15
ATG4B-209ENST00000425239 PHF8Q9UPP1 1060 aa22.26■■□□□ 1.15
ATG4B-209ENST00000425239 GLI3P10071 1580 aa22.25■■□□□ 1.15
ATG4B-209ENST00000425239 PRAM1Q96QH2 718 aa22.25■■□□□ 1.15
ATG4B-209ENST00000425239 ADGRB1O14514 1584 aa22.24■■□□□ 1.15
ATG4B-209ENST00000425239 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
ATG4B-209ENST00000425239 USP32Q8NFA0 1604 aa22.23■■□□□ 1.15
ATG4B-209ENST00000425239 RAB3GAP2Q9H2M9 1393 aa22.23■■□□□ 1.15
ATG4B-209ENST00000425239 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
ATG4B-209ENST00000425239 CABLES1Q8TDN4 633 aa22.22■■□□□ 1.15
ATG4B-209ENST00000425239 TNS3Q68CZ2 1445 aa22.22■■□□□ 1.15
ATG4B-209ENST00000425239 SBNO1A3KN83 1393 aa22.21■■□□□ 1.15
ATG4B-209ENST00000425239 SAFB2Q14151 953 aaKnown RBP eCLIP22.2■■□□□ 1.14
ATG4B-209ENST00000425239 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
ATG4B-209ENST00000425239 ONECUT3O60422 494 aaPredicted RBP22.19■■□□□ 1.14
ATG4B-209ENST00000425239 PSME1Q06323 249 aa22.19■■□□□ 1.14
ATG4B-209ENST00000425239 ADGRB2O60241 1585 aa22.17■■□□□ 1.14
ATG4B-209ENST00000425239 ANKARQ7Z5J8 1434 aa22.17■■□□□ 1.14
ATG4B-209ENST00000425239 BRWD3Q6RI45 1802 aa22.17■■□□□ 1.14
ATG4B-209ENST00000425239 VPS72Q15906 364 aa22.16■■□□□ 1.14
ATG4B-209ENST00000425239 PMFBP1Q8TBY8 1022 aa22.16■■□□□ 1.14
ATG4B-209ENST00000425239 ABCA3Q99758 1704 aa22.16■■□□□ 1.14
ATG4B-209ENST00000425239 PRR36Q9H6K5 1346 aa22.15■■□□□ 1.14
ATG4B-209ENST00000425239 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
ATG4B-209ENST00000425239 POGKQ9P215 609 aa22.14■■□□□ 1.13
ATG4B-209ENST00000425239 TRAK1Q9UPV9 953 aa22.14■■□□□ 1.13
ATG4B-209ENST00000425239 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
ATG4B-209ENST00000425239 NWD2Q9ULI1 1742 aa22.14■■□□□ 1.13
ATG4B-209ENST00000425239 PLCH1Q4KWH8 1693 aa22.13■■□□□ 1.13
ATG4B-209ENST00000425239 ARHGEF10O15013 1369 aa22.12■■□□□ 1.13
ATG4B-209ENST00000425239 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
ATG4B-209ENST00000425239 SEPT12Q8IYM1 358 aa22.11■■□□□ 1.13
ATG4B-209ENST00000425239 HRCP23327 699 aa22.1■■□□□ 1.13
ATG4B-209ENST00000425239 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
ATG4B-209ENST00000425239 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
ATG4B-209ENST00000425239 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
ATG4B-209ENST00000425239 BLMP54132 1417 aaPredicted RBP22.09■■□□□ 1.13
ATG4B-209ENST00000425239 WASLO00401 505 aaPredicted RBP22.09■■□□□ 1.13
ATG4B-209ENST00000425239 KDM2AQ9Y2K7 1162 aa22.09■■□□□ 1.13
ATG4B-209ENST00000425239 LMOD2Q6P5Q4 547 aa22.08■■□□□ 1.13
ATG4B-209ENST00000425239 STAC3Q96MF2 364 aa22.08■■□□□ 1.13
ATG4B-209ENST00000425239 MINK1Q8N4C8 1332 aaPredicted RBP22.07■■□□□ 1.12
ATG4B-209ENST00000425239 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
ATG4B-209ENST00000425239 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
ATG4B-209ENST00000425239 NRAPQ86VF7 1730 aa22.06■■□□□ 1.12
ATG4B-209ENST00000425239 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
ATG4B-209ENST00000425239 CRYBG1Q9Y4K1 1723 aa22.04■■□□□ 1.12
ATG4B-209ENST00000425239 DEFB132Q7Z7B7 95 aa22.04■■□□□ 1.12
ATG4B-209ENST00000425239 BTG4Q9NY30 223 aa22.03■■□□□ 1.12
ATG4B-209ENST00000425239 KRT27Q7Z3Y8 459 aa22.02■■□□□ 1.12
ATG4B-209ENST00000425239 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
ATG4B-209ENST00000425239 EIF3AQ14152 1382 aaKnown RBP22■■□□□ 1.11
ATG4B-209ENST00000425239 ARHGEF28Q8N1W1 1705 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms