RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 GCGRP47871 477 aa11.91□□□□□ -0.5
PBRM1-212ENST00000424867 FECHP22830 423 aa11.89□□□□□ -0.51
PBRM1-212ENST00000424867 LCE2CQ5TA81 110 aa11.89□□□□□ -0.51
PBRM1-212ENST00000424867 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
PBRM1-212ENST00000424867 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
PBRM1-212ENST00000424867 MSS51Q4VC12 460 aa11.88□□□□□ -0.51
PBRM1-212ENST00000424867 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
PBRM1-212ENST00000424867 J3QL48 77 aa11.87□□□□□ -0.51
PBRM1-212ENST00000424867 RNF19BQ6ZMZ0 732 aa11.87□□□□□ -0.51
PBRM1-212ENST00000424867 MRGPRX2Q96LB1 330 aa11.87□□□□□ -0.51
PBRM1-212ENST00000424867 TRIM32Q13049 653 aa11.86□□□□□ -0.51
PBRM1-212ENST00000424867 SULF1Q8IWU6 871 aa11.86□□□□□ -0.51
PBRM1-212ENST00000424867 GNPATO15228 680 aa11.85□□□□□ -0.51
PBRM1-212ENST00000424867 AMER1Q5JTC6 1135 aaPredicted RBP11.84□□□□□ -0.51
PBRM1-212ENST00000424867 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
PBRM1-212ENST00000424867 GRIPAP1Q4V328 841 aa11.83□□□□□ -0.52
PBRM1-212ENST00000424867 P3H3Q8IVL6 736 aa11.83□□□□□ -0.52
PBRM1-212ENST00000424867 HPS1Q92902 700 aa11.83□□□□□ -0.52
PBRM1-212ENST00000424867 KIFC2Q96AC6 838 aa11.81□□□□□ -0.52
PBRM1-212ENST00000424867 MMP16P51512 607 aa11.79□□□□□ -0.52
PBRM1-212ENST00000424867 Q3C1V9 767 aa11.79□□□□□ -0.52
PBRM1-212ENST00000424867 REPIN1Q9BWE0 567 aaKnown RBP11.79□□□□□ -0.52
PBRM1-212ENST00000424867 PHOX2BQ99453 314 aa11.78□□□□□ -0.52
PBRM1-212ENST00000424867 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
PBRM1-212ENST00000424867 RC3H1Q5TC82 1133 aaKnown RBP11.75□□□□□ -0.53
PBRM1-212ENST00000424867 SMYD5Q6GMV2 418 aa11.75□□□□□ -0.53
PBRM1-212ENST00000424867 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
PBRM1-212ENST00000424867 TESPA1A2RU30 521 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-212ENST00000424867 FAM181BA6NEQ2 426 aa11.74□□□□□ -0.53
PBRM1-212ENST00000424867 GPR37O15354 613 aa11.74□□□□□ -0.53
PBRM1-212ENST00000424867 CCDC24Q8N4L8 307 aa11.74□□□□□ -0.53
PBRM1-212ENST00000424867 USB1Q9BQ65 265 aaKnown RBP11.74□□□□□ -0.53
PBRM1-212ENST00000424867 DXOO77932 396 aaKnown RBP11.73□□□□□ -0.53
PBRM1-212ENST00000424867 SKOR1P84550 965 aa11.71□□□□□ -0.53
PBRM1-212ENST00000424867 NXF1Q9UBU9 619 aaKnown RBP11.71□□□□□ -0.53
PBRM1-212ENST00000424867 ALDH1A1P00352 501 aa11.7□□□□□ -0.54
PBRM1-212ENST00000424867 WNT7BP56706 349 aa11.7□□□□□ -0.54
PBRM1-212ENST00000424867 GMPRP36959 345 aa11.69□□□□□ -0.54
PBRM1-212ENST00000424867 RB1CC1Q8TDY2 1594 aa11.69□□□□□ -0.54
PBRM1-212ENST00000424867 ZSCAN1Q8NBB4 408 aa11.67□□□□□ -0.54
PBRM1-212ENST00000424867 KDM4AO75164 1064 aa11.66□□□□□ -0.54
PBRM1-212ENST00000424867 CD46P15529 392 aa11.65□□□□□ -0.54
PBRM1-212ENST00000424867 IRF7Q92985 503 aa11.65□□□□□ -0.54
PBRM1-212ENST00000424867 BMP1P13497 986 aa11.63□□□□□ -0.55
PBRM1-212ENST00000424867 LORP23490 312 aaPredicted RBP11.63□□□□□ -0.55
PBRM1-212ENST00000424867 VEGFBP49765 207 aa11.63□□□□□ -0.55
PBRM1-212ENST00000424867 HLA-CQ95604 372 aa11.63□□□□□ -0.55
PBRM1-212ENST00000424867 NACADO15069 1562 aa11.62□□□□□ -0.55
PBRM1-212ENST00000424867 CAPN5O15484 640 aaPredicted RBP11.62□□□□□ -0.55
PBRM1-212ENST00000424867 TRIM46Q7Z4K8 759 aa11.62□□□□□ -0.55
PBRM1-212ENST00000424867 NPAS3Q8IXF0 933 aa11.62□□□□□ -0.55
PBRM1-212ENST00000424867 WASF2Q9Y6W5 498 aa11.6□□□□□ -0.55
PBRM1-212ENST00000424867 SIAH2O43255 324 aa11.59□□□□□ -0.55
PBRM1-212ENST00000424867 USP46P62068 366 aa11.59□□□□□ -0.55
PBRM1-212ENST00000424867 EHBP1Q8NDI1 1231 aa11.59□□□□□ -0.55
PBRM1-212ENST00000424867 H3BM21 787 aa11.58□□□□□ -0.56
PBRM1-212ENST00000424867 JUNDP17535 347 aa11.58□□□□□ -0.56
PBRM1-212ENST00000424867 GPIHBP1Q8IV16 184 aa11.57□□□□□ -0.56
PBRM1-212ENST00000424867 LOC100996750A0A140TA64 210 aa11.56□□□□□ -0.56
PBRM1-212ENST00000424867 PTCRAQ6ISU1 281 aaPredicted RBP11.56□□□□□ -0.56
PBRM1-212ENST00000424867 KRTAP4-6Q9BYQ5 205 aa11.56□□□□□ -0.56
PBRM1-212ENST00000424867 ERBB4Q15303 1308 aa11.56□□□□□ -0.56
PBRM1-212ENST00000424867 MYO15BQ96JP2 1530 aa11.55□□□□□ -0.56
PBRM1-212ENST00000424867 HOXA2O43364 376 aa11.55□□□□□ -0.56
PBRM1-212ENST00000424867 SYMPKQ92797 1274 aaKnown RBP11.55□□□□□ -0.56
PBRM1-212ENST00000424867 GUCA2AQ02747 115 aa11.54□□□□□ -0.56
PBRM1-212ENST00000424867 NUDT12Q9BQG2 462 aa11.53□□□□□ -0.56
PBRM1-212ENST00000424867 ZFP42Q96MM3 310 aa11.52□□□□□ -0.57
PBRM1-212ENST00000424867 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
PBRM1-212ENST00000424867 SH3BP2P78314 561 aa11.5□□□□□ -0.57
PBRM1-212ENST00000424867 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
PBRM1-212ENST00000424867 RETREG3Q86VR2 466 aa11.48□□□□□ -0.57
PBRM1-212ENST00000424867 IRF6O14896 467 aa11.45□□□□□ -0.58
PBRM1-212ENST00000424867 CCNYL3P0C7X3 344 aa11.43□□□□□ -0.58
PBRM1-212ENST00000424867 MS4A1P11836 297 aa11.43□□□□□ -0.58
PBRM1-212ENST00000424867 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
PBRM1-212ENST00000424867 TLL2Q9Y6L7 1015 aa11.43□□□□□ -0.58
PBRM1-212ENST00000424867 SCARF1Q14162 830 aa11.42□□□□□ -0.58
PBRM1-212ENST00000424867 MRPL14Q6P1L8 145 aaKnown RBP11.42□□□□□ -0.58
PBRM1-212ENST00000424867 PLEKHG3A1L390 1219 aa11.41□□□□□ -0.58
PBRM1-212ENST00000424867 C6orf229H3BNL8 230 aa11.41□□□□□ -0.58
PBRM1-212ENST00000424867 NNTQ13423 1086 aa11.41□□□□□ -0.58
PBRM1-212ENST00000424867 SUZ12Q15022 739 aaKnown RBP11.41□□□□□ -0.58
PBRM1-212ENST00000424867 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
PBRM1-212ENST00000424867 BAP1Q92560 729 aa11.41□□□□□ -0.58
PBRM1-212ENST00000424867 PURBQ96QR8 312 aaKnown RBP11.41□□□□□ -0.58
PBRM1-212ENST00000424867 UNC93B1Q9H1C4 597 aa11.4□□□□□ -0.58
PBRM1-212ENST00000424867 SOBPA7XYQ1 873 aa11.39□□□□□ -0.59
PBRM1-212ENST00000424867 FDX1P10109 184 aa11.39□□□□□ -0.59
PBRM1-212ENST00000424867 MINK1Q8N4C8 1332 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-212ENST00000424867 FAM217BQ9NTX9 383 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-212ENST00000424867 EVA1BQ9NVM1 165 aa11.38□□□□□ -0.59
PBRM1-212ENST00000424867 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
PBRM1-212ENST00000424867 VSIG8P0DPA2 414 aa11.37□□□□□ -0.59
PBRM1-212ENST00000424867 VARSP26640 1264 aaKnown RBP11.37□□□□□ -0.59
PBRM1-212ENST00000424867 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
PBRM1-212ENST00000424867 DCAF1Q9Y4B6 1507 aa11.36□□□□□ -0.59
PBRM1-212ENST00000424867 TIMP2P16035 220 aa11.36□□□□□ -0.59
PBRM1-212ENST00000424867 CLCN1P35523 988 aa11.36□□□□□ -0.59
PBRM1-212ENST00000424867 WDR4P57081 412 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms