RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
TPM3P9-201ENST00000424846 VIRMAQ69YN4 1812 aaKnown RBP18.27■□□□□ 0.52
TPM3P9-201ENST00000424846 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
TPM3P9-201ENST00000424846 KIF1BO60333 1816 aa18.27■□□□□ 0.52
TPM3P9-201ENST00000424846 MTHFSP49914 203 aa18.27■□□□□ 0.52
TPM3P9-201ENST00000424846 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
TPM3P9-201ENST00000424846 NLRP1Q9C000 1473 aa18.26■□□□□ 0.51
TPM3P9-201ENST00000424846 PPRC1Q5VV67 1664 aaKnown RBP18.26■□□□□ 0.51
TPM3P9-201ENST00000424846 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
TPM3P9-201ENST00000424846 RUNDC1Q96C34 613 aa18.26■□□□□ 0.51
TPM3P9-201ENST00000424846 SLKQ9H2G2 1235 aaPredicted RBP18.26■□□□□ 0.51
TPM3P9-201ENST00000424846 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.25■□□□□ 0.51
TPM3P9-201ENST00000424846 EFCAB6Q5THR3 1501 aa18.24■□□□□ 0.51
TPM3P9-201ENST00000424846 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
TPM3P9-201ENST00000424846 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
TPM3P9-201ENST00000424846 NRXN1Q9ULB1 1477 aa18.24■□□□□ 0.51
TPM3P9-201ENST00000424846 ABCA9Q8IUA7 1624 aa18.24■□□□□ 0.51
TPM3P9-201ENST00000424846 ARAP3Q8WWN8 1544 aa18.23■□□□□ 0.51
TPM3P9-201ENST00000424846 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
TPM3P9-201ENST00000424846 PDZRN3Q9UPQ7 1066 aa18.22■□□□□ 0.51
TPM3P9-201ENST00000424846 POGKQ9P215 609 aa18.22■□□□□ 0.51
TPM3P9-201ENST00000424846 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
TPM3P9-201ENST00000424846 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
TPM3P9-201ENST00000424846 NEURL4Q96JN8 1562 aa18.21■□□□□ 0.51
TPM3P9-201ENST00000424846 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
TPM3P9-201ENST00000424846 TSR2Q969E8 191 aaKnown RBP18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 QRICH2Q9H0J4 1663 aa18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 GGT6Q6P531 493 aa18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 C14orf93Q9H972 538 aaKnown RBP18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
TPM3P9-201ENST00000424846 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
TPM3P9-201ENST00000424846 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
TPM3P9-201ENST00000424846 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
TPM3P9-201ENST00000424846 ZNF518AQ6AHZ1 1483 aa18.18■□□□□ 0.5
TPM3P9-201ENST00000424846 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
TPM3P9-201ENST00000424846 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
TPM3P9-201ENST00000424846 U2AF1L5P0DN76 240 aaPredicted RBP18.17■□□□□ 0.5
TPM3P9-201ENST00000424846 U2AF1Q01081 240 aaKnown RBP eCLIP18.17■□□□□ 0.5
TPM3P9-201ENST00000424846 NPATQ14207 1427 aa18.17■□□□□ 0.5
TPM3P9-201ENST00000424846 WDR63Q8IWG1 891 aa18.16■□□□□ 0.5
TPM3P9-201ENST00000424846 SPRYD3Q8NCJ5 442 aa18.16■□□□□ 0.5
TPM3P9-201ENST00000424846 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
TPM3P9-201ENST00000424846 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
TPM3P9-201ENST00000424846 ANTXR1Q9H6X2 564 aa18.15■□□□□ 0.5
TPM3P9-201ENST00000424846 TBC1D32Q96NH3 1257 aa18.14■□□□□ 0.49
TPM3P9-201ENST00000424846 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
TPM3P9-201ENST00000424846 SETBP1Q9Y6X0 1596 aa18.14■□□□□ 0.49
TPM3P9-201ENST00000424846 PPLO60437 1756 aa18.13■□□□□ 0.49
TPM3P9-201ENST00000424846 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
TPM3P9-201ENST00000424846 TULP4Q9NRJ4 1543 aa18.11■□□□□ 0.49
TPM3P9-201ENST00000424846 ASXL2Q76L83 1435 aa18.11■□□□□ 0.49
TPM3P9-201ENST00000424846 EXOSC9Q06265 439 aaKnown RBP18.11■□□□□ 0.49
TPM3P9-201ENST00000424846 BECN1Q14457 450 aa18.11■□□□□ 0.49
TPM3P9-201ENST00000424846 CCDC27Q2M243 656 aa18.11■□□□□ 0.49
TPM3P9-201ENST00000424846 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
TPM3P9-201ENST00000424846 GGNBP2Q9H3C7 697 aa18.1■□□□□ 0.49
TPM3P9-201ENST00000424846 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
TPM3P9-201ENST00000424846 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
TPM3P9-201ENST00000424846 LMTK2Q8IWU2 1503 aa18.09■□□□□ 0.49
TPM3P9-201ENST00000424846 RWDD1Q9H446 243 aaPredicted RBP18.09■□□□□ 0.49
TPM3P9-201ENST00000424846 TRIM27P14373 513 aa18.08■□□□□ 0.49
TPM3P9-201ENST00000424846 DZIP1LQ8IYY4 767 aaKnown RBP18.08■□□□□ 0.49
TPM3P9-201ENST00000424846 ARXQ96QS3 562 aa18.08■□□□□ 0.49
TPM3P9-201ENST00000424846 MYH16Q9H6N6 1097 aa18.08■□□□□ 0.49
TPM3P9-201ENST00000424846 STK26Q9P289 416 aa18.08■□□□□ 0.49
TPM3P9-201ENST00000424846 FRMPD1Q5SYB0 1578 aa18.08■□□□□ 0.48
TPM3P9-201ENST00000424846 ZKSCAN2Q63HK3 967 aa18.08■□□□□ 0.48
TPM3P9-201ENST00000424846 FTSJ3Q8IY81 847 aaKnown RBP18.08■□□□□ 0.48
TPM3P9-201ENST00000424846 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
TPM3P9-201ENST00000424846 TRIM35Q9UPQ4 493 aa18.08■□□□□ 0.48
TPM3P9-201ENST00000424846 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
TPM3P9-201ENST00000424846 GLI2P10070 1586 aa18.07■□□□□ 0.48
TPM3P9-201ENST00000424846 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
TPM3P9-201ENST00000424846 ANKRD36BQ8N2N9 1353 aa18.06■□□□□ 0.48
TPM3P9-201ENST00000424846 MFAP1P55081 439 aaKnown RBP18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 USP32Q8NFA0 1604 aa18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 TMPOP42166 694 aaKnown RBP18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 UPF2Q9HAU5 1272 aaKnown RBP18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 ADGRB2O60241 1585 aa18.05■□□□□ 0.48
TPM3P9-201ENST00000424846 SIGLEC1Q9BZZ2 1709 aa18.04■□□□□ 0.48
TPM3P9-201ENST00000424846 ITPRIPQ8IWB1 547 aa18.04■□□□□ 0.48
TPM3P9-201ENST00000424846 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
TPM3P9-201ENST00000424846 NOB1Q9ULX3 412 aaKnown RBP18.03■□□□□ 0.48
TPM3P9-201ENST00000424846 FBLN1P23142 703 aa18.03■□□□□ 0.48
TPM3P9-201ENST00000424846 CAMSAP1Q5T5Y3 1602 aa18.02■□□□□ 0.48
TPM3P9-201ENST00000424846 AAMPQ13685 434 aa18.02■□□□□ 0.48
TPM3P9-201ENST00000424846 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.47
TPM3P9-201ENST00000424846 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
TPM3P9-201ENST00000424846 C22orf23Q9BZE7 217 aa18.01■□□□□ 0.47
TPM3P9-201ENST00000424846 GZF1Q9H116 711 aaPredicted RBP18■□□□□ 0.47
TPM3P9-201ENST00000424846 ABCC3O15438 1527 aa18■□□□□ 0.47
TPM3P9-201ENST00000424846 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
TPM3P9-201ENST00000424846 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
TPM3P9-201ENST00000424846 ATF7IPQ6VMQ6 1270 aa17.99■□□□□ 0.47
TPM3P9-201ENST00000424846 FYB1O15117 783 aa17.99■□□□□ 0.47
TPM3P9-201ENST00000424846 COL3A1P02461 1466 aaPredicted RBP17.99■□□□□ 0.47
TPM3P9-201ENST00000424846 IDI1Q13907 227 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms