RNA–Protein interactions for RNA: ENST00000424714.1

PITRM1-204, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 3

Gene PITRM1, Length 482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-204ENST00000424714 NBPF8Q3BBV2 869 aa19.07■□□□□ 0.64
PITRM1-204ENST00000424714 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
PITRM1-204ENST00000424714 PLEKHH1Q9ULM0 1364 aa19.06■□□□□ 0.64
PITRM1-204ENST00000424714 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.06■□□□□ 0.64
PITRM1-204ENST00000424714 TRPM1Q7Z4N2 1603 aa19.04■□□□□ 0.64
PITRM1-204ENST00000424714 NALCNQ8IZF0 1738 aa19.04■□□□□ 0.64
PITRM1-204ENST00000424714 SAFB2Q14151 953 aaKnown RBP eCLIP19.03■□□□□ 0.64
PITRM1-204ENST00000424714 RALGAPBQ86X10 1494 aa19.03■□□□□ 0.64
PITRM1-204ENST00000424714 GPRASP1Q5JY77 1395 aa19.02■□□□□ 0.64
PITRM1-204ENST00000424714 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
PITRM1-204ENST00000424714 MST1RQ04912 1400 aa19■□□□□ 0.63
PITRM1-204ENST00000424714 CARD11Q9BXL7 1154 aa19■□□□□ 0.63
PITRM1-204ENST00000424714 EIF3AQ14152 1382 aaKnown RBP18.99■□□□□ 0.63
PITRM1-204ENST00000424714 ARHGEF28Q8N1W1 1705 aaKnown RBP18.98■□□□□ 0.63
PITRM1-204ENST00000424714 MINK1Q8N4C8 1332 aaPredicted RBP18.98■□□□□ 0.63
PITRM1-204ENST00000424714 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
PITRM1-204ENST00000424714 HSPA1LP34931 641 aa18.97■□□□□ 0.63
PITRM1-204ENST00000424714 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
PITRM1-204ENST00000424714 BRINP3Q76B58 766 aa18.95■□□□□ 0.62
PITRM1-204ENST00000424714 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
PITRM1-204ENST00000424714 ROBO1Q9Y6N7 1651 aa18.95■□□□□ 0.62
PITRM1-204ENST00000424714 ADGRB2O60241 1585 aa18.94■□□□□ 0.62
PITRM1-204ENST00000424714 WASLO00401 505 aaPredicted RBP18.93■□□□□ 0.62
PITRM1-204ENST00000424714 NUTM2FA1L443 756 aa18.91■□□□□ 0.62
PITRM1-204ENST00000424714 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
PITRM1-204ENST00000424714 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
PITRM1-204ENST00000424714 FMN2Q9NZ56 1722 aa18.89■□□□□ 0.61
PITRM1-204ENST00000424714 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
PITRM1-204ENST00000424714 CDK19Q9BWU1 502 aa18.87■□□□□ 0.61
PITRM1-204ENST00000424714 TULP4Q9NRJ4 1543 aa18.87■□□□□ 0.61
PITRM1-204ENST00000424714 QRICH2Q9H0J4 1663 aa18.86■□□□□ 0.61
PITRM1-204ENST00000424714 AHDC1Q5TGY3 1603 aaPredicted RBP18.86■□□□□ 0.61
PITRM1-204ENST00000424714 SBNO2Q9Y2G9 1366 aa18.86■□□□□ 0.61
PITRM1-204ENST00000424714 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
PITRM1-204ENST00000424714 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
PITRM1-204ENST00000424714 USP47Q96K76 1375 aa18.84■□□□□ 0.61
PITRM1-204ENST00000424714 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
PITRM1-204ENST00000424714 SRPK2P78362 688 aaKnown RBP18.84■□□□□ 0.61
PITRM1-204ENST00000424714 PHF8Q9UPP1 1060 aa18.84■□□□□ 0.61
PITRM1-204ENST00000424714 NUDT16Q96DE0 195 aaKnown RBP18.83■□□□□ 0.6
PITRM1-204ENST00000424714 PHLPP1O60346 1717 aa18.83■□□□□ 0.6
PITRM1-204ENST00000424714 DISP3Q9P2K9 1392 aa18.82■□□□□ 0.6
PITRM1-204ENST00000424714 PRR36Q9H6K5 1346 aa18.82■□□□□ 0.6
PITRM1-204ENST00000424714 ST20-MTHFSA0A0A6YYL1 179 aa18.82■□□□□ 0.6
PITRM1-204ENST00000424714 FOXO3O43524 673 aa18.81■□□□□ 0.6
PITRM1-204ENST00000424714 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
PITRM1-204ENST00000424714 CCDC61Q9Y6R9 512 aa18.81■□□□□ 0.6
PITRM1-204ENST00000424714 ATP7BP35670 1465 aa18.81■□□□□ 0.6
PITRM1-204ENST00000424714 KIF1AQ12756 1690 aa18.81■□□□□ 0.6
PITRM1-204ENST00000424714 NHSL1Q5SYE7 1610 aa18.81■□□□□ 0.6
PITRM1-204ENST00000424714 CABP2Q9NPB3 220 aa18.8■□□□□ 0.6
PITRM1-204ENST00000424714 SOS2Q07890 1332 aaPredicted RBP18.79■□□□□ 0.6
PITRM1-204ENST00000424714 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
PITRM1-204ENST00000424714 ILDR2Q71H61 639 aa18.79■□□□□ 0.6
PITRM1-204ENST00000424714 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
PITRM1-204ENST00000424714 LRRC59Q96AG4 307 aaKnown RBP18.79■□□□□ 0.6
PITRM1-204ENST00000424714 JCADQ9P266 1359 aa18.79■□□□□ 0.6
PITRM1-204ENST00000424714 COL16A1Q07092 1604 aaPredicted RBP18.78■□□□□ 0.6
PITRM1-204ENST00000424714 PSME1Q06323 249 aa18.77■□□□□ 0.6
PITRM1-204ENST00000424714 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
PITRM1-204ENST00000424714 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
PITRM1-204ENST00000424714 KRT28Q7Z3Y7 464 aa18.76■□□□□ 0.59
PITRM1-204ENST00000424714 TESK2Q96S53 571 aa18.76■□□□□ 0.59
PITRM1-204ENST00000424714 PLEKHG3A1L390 1219 aa18.75■□□□□ 0.59
PITRM1-204ENST00000424714 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.59
PITRM1-204ENST00000424714 MED1Q15648 1581 aaPredicted RBP18.75■□□□□ 0.59
PITRM1-204ENST00000424714 ITSN1Q15811 1721 aa18.74■□□□□ 0.59
PITRM1-204ENST00000424714 RGPD8O14715 1765 aaPredicted RBP18.74■□□□□ 0.59
PITRM1-204ENST00000424714 PXDNQ92626 1479 aa18.74■□□□□ 0.59
PITRM1-204ENST00000424714 TMF1P82094 1093 aa18.74■□□□□ 0.59
PITRM1-204ENST00000424714 XPCQ01831 940 aaPredicted RBP18.74■□□□□ 0.59
PITRM1-204ENST00000424714 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
PITRM1-204ENST00000424714 PPIP5K1Q6PFW1 1433 aa18.74■□□□□ 0.59
PITRM1-204ENST00000424714 SPATA31A6Q5VVP1 1343 aa18.72■□□□□ 0.59
PITRM1-204ENST00000424714 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
PITRM1-204ENST00000424714 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
PITRM1-204ENST00000424714 TOPAZ1Q8N9V7 1692 aa18.71■□□□□ 0.59
PITRM1-204ENST00000424714 CDCA8Q53HL2 280 aa18.71■□□□□ 0.59
PITRM1-204ENST00000424714 CABP1Q9NZU7 370 aa18.71■□□□□ 0.59
PITRM1-204ENST00000424714 ACEP12821 1306 aa18.71■□□□□ 0.59
PITRM1-204ENST00000424714 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
PITRM1-204ENST00000424714 HSPA5P11021 654 aaKnown RBP18.69■□□□□ 0.58
PITRM1-204ENST00000424714 SPATA31A3Q5VYP0 1347 aa18.69■□□□□ 0.58
PITRM1-204ENST00000424714 SHPRHQ149N8 1683 aa18.68■□□□□ 0.58
PITRM1-204ENST00000424714 TNS3Q68CZ2 1445 aa18.67■□□□□ 0.58
PITRM1-204ENST00000424714 ARHGEF10O15013 1369 aa18.67■□□□□ 0.58
PITRM1-204ENST00000424714 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
PITRM1-204ENST00000424714 NINLQ9Y2I6 1382 aa18.66■□□□□ 0.58
PITRM1-204ENST00000424714 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
PITRM1-204ENST00000424714 LMOD2Q6P5Q4 547 aa18.65■□□□□ 0.58
PITRM1-204ENST00000424714 ZNF692Q9BU19 519 aaPredicted RBP18.65■□□□□ 0.58
PITRM1-204ENST00000424714 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
PITRM1-204ENST00000424714 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
PITRM1-204ENST00000424714 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
PITRM1-204ENST00000424714 HDGFL2Q7Z4V5 671 aaPredicted RBP18.63■□□□□ 0.57
PITRM1-204ENST00000424714 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
PITRM1-204ENST00000424714 MEX3CQ5U5Q3 659 aaKnown RBP18.62■□□□□ 0.57
PITRM1-204ENST00000424714 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
PITRM1-204ENST00000424714 USP6P35125 1406 aa18.62■□□□□ 0.57
PITRM1-204ENST00000424714 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms