RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PIP4K2BP78356 416 aa36.18■■■■□ 3.38
TSPAN3-203ENST00000424443 PLEKHH1Q9ULM0 1364 aa36.17■■■■□ 3.38
TSPAN3-203ENST00000424443 NALCNQ8IZF0 1738 aa36.17■■■■□ 3.38
TSPAN3-203ENST00000424443 SAFB2Q14151 953 aaKnown RBP eCLIP36.17■■■■□ 3.38
TSPAN3-203ENST00000424443 DCCP43146 1447 aa36.15■■■■□ 3.38
TSPAN3-203ENST00000424443 RALGAPBQ86X10 1494 aa36.13■■■■□ 3.37
TSPAN3-203ENST00000424443 CARD11Q9BXL7 1154 aa36.11■■■■□ 3.37
TSPAN3-203ENST00000424443 ARHGEF28Q8N1W1 1705 aaKnown RBP36.11■■■■□ 3.37
TSPAN3-203ENST00000424443 SLAIN2Q9P270 581 aa36.1■■■■□ 3.37
TSPAN3-203ENST00000424443 GPRASP1Q5JY77 1395 aa36.07■■■■□ 3.37
TSPAN3-203ENST00000424443 ILDR1Q86SU0 546 aaPredicted RBP36.05■■■■□ 3.36
TSPAN3-203ENST00000424443 EIF3AQ14152 1382 aaKnown RBP36.03■■■■□ 3.36
TSPAN3-203ENST00000424443 CDC42BPGQ6DT37 1551 aa36.03■■■■□ 3.36
TSPAN3-203ENST00000424443 MINK1Q8N4C8 1332 aaPredicted RBP36.03■■■■□ 3.36
TSPAN3-203ENST00000424443 CENPJQ9HC77 1338 aaPredicted RBP36.01■■■■□ 3.36
TSPAN3-203ENST00000424443 HIRIP3Q9BW71 556 aaPredicted RBP35.99■■■■□ 3.35
TSPAN3-203ENST00000424443 MST1RQ04912 1400 aa35.98■■■■□ 3.35
TSPAN3-203ENST00000424443 ROBO1Q9Y6N7 1651 aa35.94■■■■□ 3.34
TSPAN3-203ENST00000424443 NUTM2FA1L443 756 aa35.93■■■■□ 3.34
TSPAN3-203ENST00000424443 ADGRB2O60241 1585 aa35.93■■■■□ 3.34
TSPAN3-203ENST00000424443 C1orf167Q5SNV9 1468 aa35.92■■■■□ 3.34
TSPAN3-203ENST00000424443 QRICH2Q9H0J4 1663 aa35.91■■■■□ 3.34
TSPAN3-203ENST00000424443 FMN2Q9NZ56 1722 aa35.9■■■■□ 3.34
TSPAN3-203ENST00000424443 WASLO00401 505 aaPredicted RBP35.89■■■■□ 3.34
TSPAN3-203ENST00000424443 BRINP3Q76B58 766 aa35.88■■■■□ 3.33
TSPAN3-203ENST00000424443 ESCO1Q5FWF5 840 aa35.86■■■■□ 3.33
TSPAN3-203ENST00000424443 ORAI2Q96SN7 254 aa35.83■■■■□ 3.33
TSPAN3-203ENST00000424443 HSPA1LP34931 641 aa35.83■■■■□ 3.33
TSPAN3-203ENST00000424443 CDK19Q9BWU1 502 aa35.83■■■■□ 3.33
TSPAN3-203ENST00000424443 USP47Q96K76 1375 aa35.8■■■■□ 3.32
TSPAN3-203ENST00000424443 ANKARQ7Z5J8 1434 aa35.79■■■■□ 3.32
TSPAN3-203ENST00000424443 SRPK2P78362 688 aaKnown RBP35.78■■■■□ 3.32
TSPAN3-203ENST00000424443 TULP4Q9NRJ4 1543 aa35.78■■■■□ 3.32
TSPAN3-203ENST00000424443 EVC2Q86UK5 1308 aa35.78■■■■□ 3.32
TSPAN3-203ENST00000424443 ST20-MTHFSA0A0A6YYL1 179 aa35.77■■■■□ 3.32
TSPAN3-203ENST00000424443 SBNO2Q9Y2G9 1366 aa35.74■■■■□ 3.31
TSPAN3-203ENST00000424443 RGPD8O14715 1765 aaPredicted RBP35.74■■■■□ 3.31
TSPAN3-203ENST00000424443 PHLPP1O60346 1717 aa35.73■■■■□ 3.31
TSPAN3-203ENST00000424443 NUDT16Q96DE0 195 aaKnown RBP35.73■■■■□ 3.31
TSPAN3-203ENST00000424443 SLC24A1O60721 1099 aa35.72■■■■□ 3.31
TSPAN3-203ENST00000424443 PHF8Q9UPP1 1060 aa35.72■■■■□ 3.31
TSPAN3-203ENST00000424443 USP32Q8NFA0 1604 aa35.71■■■■□ 3.31
TSPAN3-203ENST00000424443 CABP2Q9NPB3 220 aa35.71■■■■□ 3.31
TSPAN3-203ENST00000424443 AHDC1Q5TGY3 1603 aaPredicted RBP35.71■■■■□ 3.31
TSPAN3-203ENST00000424443 PRR36Q9H6K5 1346 aa35.7■■■■□ 3.31
TSPAN3-203ENST00000424443 KIF1AQ12756 1690 aa35.69■■■■□ 3.3
TSPAN3-203ENST00000424443 DDX17Q92841 729 aaKnown RBP35.68■■■■□ 3.3
TSPAN3-203ENST00000424443 NPHP3Q7Z494 1330 aa35.68■■■■□ 3.3
TSPAN3-203ENST00000424443 NHSL1Q5SYE7 1610 aa35.68■■■■□ 3.3
TSPAN3-203ENST00000424443 FOXO3O43524 673 aa35.67■■■■□ 3.3
TSPAN3-203ENST00000424443 ATP7BP35670 1465 aa35.67■■■■□ 3.3
TSPAN3-203ENST00000424443 EIF4G2P78344 907 aaKnown RBP eCLIP35.67■■■■□ 3.3
TSPAN3-203ENST00000424443 PMFBP1Q8TBY8 1022 aa35.67■■■■□ 3.3
TSPAN3-203ENST00000424443 CCDC61Q9Y6R9 512 aa35.66■■■■□ 3.3
TSPAN3-203ENST00000424443 ITSN1Q15811 1721 aa35.66■■■■□ 3.3
TSPAN3-203ENST00000424443 TESK2Q96S53 571 aa35.62■■■■□ 3.29
TSPAN3-203ENST00000424443 NGDNQ8NEJ9 315 aaKnown RBP35.61■■■■□ 3.29
TSPAN3-203ENST00000424443 COL16A1Q07092 1604 aaPredicted RBP35.6■■■■□ 3.29
TSPAN3-203ENST00000424443 TMF1P82094 1093 aa35.59■■■■□ 3.29
TSPAN3-203ENST00000424443 PSME1Q06323 249 aa35.58■■■■□ 3.29
TSPAN3-203ENST00000424443 LRRC59Q96AG4 307 aaKnown RBP35.58■■■■□ 3.29
TSPAN3-203ENST00000424443 XPCQ01831 940 aaPredicted RBP35.57■■■■□ 3.29
TSPAN3-203ENST00000424443 ATAD2Q6PL18 1390 aa35.57■■■■□ 3.28
TSPAN3-203ENST00000424443 SOS2Q07890 1332 aaPredicted RBP35.57■■■■□ 3.28
TSPAN3-203ENST00000424443 PPIP5K1Q6PFW1 1433 aa35.56■■■■□ 3.28
TSPAN3-203ENST00000424443 HSPA5P11021 654 aaKnown RBP35.56■■■■□ 3.28
TSPAN3-203ENST00000424443 TOPAZ1Q8N9V7 1692 aa35.56■■■■□ 3.28
TSPAN3-203ENST00000424443 KRT28Q7Z3Y7 464 aa35.55■■■■□ 3.28
TSPAN3-203ENST00000424443 JCADQ9P266 1359 aa35.53■■■■□ 3.28
TSPAN3-203ENST00000424443 PLEKHG3A1L390 1219 aa35.52■■■■□ 3.28
TSPAN3-203ENST00000424443 CABP1Q9NZU7 370 aa35.52■■■■□ 3.28
TSPAN3-203ENST00000424443 PXDNQ92626 1479 aa35.51■■■■□ 3.28
TSPAN3-203ENST00000424443 CDCA8Q53HL2 280 aa35.51■■■■□ 3.27
TSPAN3-203ENST00000424443 PUS7Q96PZ0 661 aaKnown RBP35.51■■■■□ 3.27
TSPAN3-203ENST00000424443 ACEP12821 1306 aa35.5■■■■□ 3.27
TSPAN3-203ENST00000424443 DISP3Q9P2K9 1392 aa35.48■■■■□ 3.27
TSPAN3-203ENST00000424443 ZEB1P37275 1124 aaPredicted RBP35.47■■■■□ 3.27
TSPAN3-203ENST00000424443 TMC1Q8TDI8 760 aa35.47■■■■□ 3.27
TSPAN3-203ENST00000424443 POLR3AO14802 1390 aaPredicted RBP35.45■■■■□ 3.27
TSPAN3-203ENST00000424443 SHPRHQ149N8 1683 aa35.42■■■■□ 3.26
TSPAN3-203ENST00000424443 PAK3O75914 559 aaPredicted RBP35.42■■■■□ 3.26
TSPAN3-203ENST00000424443 LMOD2Q6P5Q4 547 aa35.41■■■■□ 3.26
TSPAN3-203ENST00000424443 SPATA31A3Q5VYP0 1347 aa35.41■■■■□ 3.26
TSPAN3-203ENST00000424443 SBNO1A3KN83 1393 aa35.41■■■■□ 3.26
TSPAN3-203ENST00000424443 TNS3Q68CZ2 1445 aa35.38■■■■□ 3.25
TSPAN3-203ENST00000424443 PNPLA6Q8IY17 1366 aa35.38■■■■□ 3.25
TSPAN3-203ENST00000424443 SPATA31A6Q5VVP1 1343 aa35.38■■■■□ 3.25
TSPAN3-203ENST00000424443 ZNF692Q9BU19 519 aaPredicted RBP35.37■■■■□ 3.25
TSPAN3-203ENST00000424443 NINLQ9Y2I6 1382 aa35.36■■■■□ 3.25
TSPAN3-203ENST00000424443 SLC12A5Q9H2X9 1139 aa35.36■■■■□ 3.25
TSPAN3-203ENST00000424443 POLR3GLQ9BT43 218 aa35.35■■■■□ 3.25
TSPAN3-203ENST00000424443 HDGFL2Q7Z4V5 671 aaPredicted RBP35.34■■■■□ 3.25
TSPAN3-203ENST00000424443 ARHGEF10O15013 1369 aa35.34■■■■□ 3.25
TSPAN3-203ENST00000424443 TERF2IPQ9NYB0 399 aa35.33■■■■□ 3.25
TSPAN3-203ENST00000424443 TRPM3Q9HCF6 1732 aaPredicted RBP35.33■■■■□ 3.25
TSPAN3-203ENST00000424443 NUTM2BA6NNL0 878 aaPredicted RBP35.32■■■■□ 3.24
TSPAN3-203ENST00000424443 NUTM2EB1AL46 878 aaPredicted RBP35.32■■■■□ 3.24
TSPAN3-203ENST00000424443 NUTM2AQ8IVF1 878 aaPredicted RBP35.32■■■■□ 3.24
TSPAN3-203ENST00000424443 USP6P35125 1406 aa35.31■■■■□ 3.24
TSPAN3-203ENST00000424443 BRD4O60885 1362 aaPredicted RBP35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms