RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 TULP4Q9NRJ4 1543 aa19.65■□□□□ 0.74
ACTN4-203ENST00000424234 CENPJQ9HC77 1338 aaPredicted RBP19.65■□□□□ 0.74
ACTN4-203ENST00000424234 CDC42BPGQ6DT37 1551 aa19.65■□□□□ 0.74
ACTN4-203ENST00000424234 SBNO2Q9Y2G9 1366 aa19.65■□□□□ 0.74
ACTN4-203ENST00000424234 LRRC7Q96NW7 1537 aa19.65■□□□□ 0.74
ACTN4-203ENST00000424234 HSPA5P11021 654 aaKnown RBP19.65■□□□□ 0.74
ACTN4-203ENST00000424234 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
ACTN4-203ENST00000424234 ITSN1Q15811 1721 aa19.63■□□□□ 0.73
ACTN4-203ENST00000424234 ST20-MTHFSA0A0A6YYL1 179 aa19.63■□□□□ 0.73
ACTN4-203ENST00000424234 SIRT1Q96EB6 747 aa19.63■□□□□ 0.73
ACTN4-203ENST00000424234 MYOM1P52179 1685 aa19.63■□□□□ 0.73
ACTN4-203ENST00000424234 WAPLQ7Z5K2 1190 aa19.62■□□□□ 0.73
ACTN4-203ENST00000424234 ADGRL3Q9HAR2 1447 aa19.61■□□□□ 0.73
ACTN4-203ENST00000424234 TOPAZ1Q8N9V7 1692 aa19.61■□□□□ 0.73
ACTN4-203ENST00000424234 USP32Q8NFA0 1604 aa19.61■□□□□ 0.73
ACTN4-203ENST00000424234 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.732e-6■■□□□ 14.4
ACTN4-203ENST00000424234 TESK2Q96S53 571 aa19.6■□□□□ 0.73
ACTN4-203ENST00000424234 HIRIP3Q9BW71 556 aaPredicted RBP19.6■□□□□ 0.73
ACTN4-203ENST00000424234 POGKQ9P215 609 aa19.6■□□□□ 0.73
ACTN4-203ENST00000424234 TMEM94Q12767 1356 aa19.58■□□□□ 0.73
ACTN4-203ENST00000424234 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
ACTN4-203ENST00000424234 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
ACTN4-203ENST00000424234 MINK1Q8N4C8 1332 aaPredicted RBP19.56■□□□□ 0.72
ACTN4-203ENST00000424234 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
ACTN4-203ENST00000424234 PROSER2Q86WR7 435 aaPredicted RBP19.56■□□□□ 0.72
ACTN4-203ENST00000424234 RBM33Q96EV2 1170 aaKnown RBP19.55■□□□□ 0.72
ACTN4-203ENST00000424234 DCCP43146 1447 aa19.53■□□□□ 0.72
ACTN4-203ENST00000424234 AKAP12Q02952 1782 aa19.52■□□□□ 0.72
ACTN4-203ENST00000424234 ATP7BP35670 1465 aa19.52■□□□□ 0.71
ACTN4-203ENST00000424234 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
ACTN4-203ENST00000424234 TMF1P82094 1093 aa19.49■□□□□ 0.71
ACTN4-203ENST00000424234 MSH6P52701 1360 aa19.48■□□□□ 0.71
ACTN4-203ENST00000424234 C14orf37Q86TY3 774 aa19.48■□□□□ 0.71
ACTN4-203ENST00000424234 IQSEC2Q5JU85 1478 aa19.47■□□□□ 0.71
ACTN4-203ENST00000424234 KIF1AQ12756 1690 aa19.47■□□□□ 0.71
ACTN4-203ENST00000424234 MON2Q7Z3U7 1717 aa19.47■□□□□ 0.71
ACTN4-203ENST00000424234 C11orf95C9JLR9 678 aaPredicted RBP19.47■□□□□ 0.71
ACTN4-203ENST00000424234 WASLO00401 505 aaPredicted RBP19.46■□□□□ 0.71
ACTN4-203ENST00000424234 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
ACTN4-203ENST00000424234 CCDC7Q96M83 1385 aa19.46■□□□□ 0.71
ACTN4-203ENST00000424234 ANKARQ7Z5J8 1434 aa19.46■□□□□ 0.7
ACTN4-203ENST00000424234 KIF7Q2M1P5 1343 aa19.45■□□□□ 0.7
ACTN4-203ENST00000424234 MST1RQ04912 1400 aa19.45■□□□□ 0.7
ACTN4-203ENST00000424234 C19orf44Q9H6X5 657 aa19.44■□□□□ 0.7
ACTN4-203ENST00000424234 WASHC2AQ641Q2 1341 aa19.44■□□□□ 0.7
ACTN4-203ENST00000424234 CCER2I3L3R5 266 aa19.44■□□□□ 0.7
ACTN4-203ENST00000424234 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
ACTN4-203ENST00000424234 ANP32CO43423 234 aa19.43■□□□□ 0.7
ACTN4-203ENST00000424234 ATAD2Q6PL18 1390 aa19.43■□□□□ 0.7
ACTN4-203ENST00000424234 SRPK2P78362 688 aaKnown RBP19.42■□□□□ 0.7
ACTN4-203ENST00000424234 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
ACTN4-203ENST00000424234 PRR36Q9H6K5 1346 aa19.42■□□□□ 0.7
ACTN4-203ENST00000424234 NRKQ7Z2Y5 1582 aa19.42■□□□□ 0.7
ACTN4-203ENST00000424234 ROBO1Q9Y6N7 1651 aa19.41■□□□□ 0.7
ACTN4-203ENST00000424234 C1orf167Q5SNV9 1468 aa19.4■□□□□ 0.7
ACTN4-203ENST00000424234 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
ACTN4-203ENST00000424234 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
ACTN4-203ENST00000424234 PPIP5K1Q6PFW1 1433 aa19.39■□□□□ 0.69
ACTN4-203ENST00000424234 PUS7Q96PZ0 661 aaKnown RBP19.39■□□□□ 0.69
ACTN4-203ENST00000424234 KIF20BQ96Q89 1820 aa19.39■□□□□ 0.69
ACTN4-203ENST00000424234 NUTM2FA1L443 756 aa19.38■□□□□ 0.69
ACTN4-203ENST00000424234 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
ACTN4-203ENST00000424234 ATF3P18847 181 aa19.37■□□□□ 0.69
ACTN4-203ENST00000424234 CD163L1Q9NR16 1453 aa19.37■□□□□ 0.69
ACTN4-203ENST00000424234 NINLQ9Y2I6 1382 aa19.37■□□□□ 0.69
ACTN4-203ENST00000424234 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
ACTN4-203ENST00000424234 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
ACTN4-203ENST00000424234 POLR3GLQ9BT43 218 aa19.36■□□□□ 0.69
ACTN4-203ENST00000424234 TRPM3Q9HCF6 1732 aaPredicted RBP19.36■□□□□ 0.69
ACTN4-203ENST00000424234 ANKRD26Q9UPS8 1709 aa19.34■□□□□ 0.69
ACTN4-203ENST00000424234 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
ACTN4-203ENST00000424234 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
ACTN4-203ENST00000424234 CPSF1Q10570 1443 aaKnown RBP19.3■□□□□ 0.68
ACTN4-203ENST00000424234 MARF1Q9Y4F3 1742 aaKnown RBP19.3■□□□□ 0.68
ACTN4-203ENST00000424234 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
ACTN4-203ENST00000424234 POLR3AO14802 1390 aaPredicted RBP19.3■□□□□ 0.68
ACTN4-203ENST00000424234 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
ACTN4-203ENST00000424234 ALS2Q96Q42 1657 aa19.29■□□□□ 0.68
ACTN4-203ENST00000424234 TMC1Q8TDI8 760 aa19.29■□□□□ 0.68
ACTN4-203ENST00000424234 SLC12A5Q9H2X9 1139 aa19.29■□□□□ 0.68
ACTN4-203ENST00000424234 PHLPP1O60346 1717 aa19.29■□□□□ 0.68
ACTN4-203ENST00000424234 AHDC1Q5TGY3 1603 aaPredicted RBP19.29■□□□□ 0.68
ACTN4-203ENST00000424234 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
ACTN4-203ENST00000424234 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
ACTN4-203ENST00000424234 USP54Q70EL1 1684 aa19.28■□□□□ 0.68
ACTN4-203ENST00000424234 PLEKHG3A1L390 1219 aa19.27■□□□□ 0.68
ACTN4-203ENST00000424234 ORAI2Q96SN7 254 aa19.27■□□□□ 0.68
ACTN4-203ENST00000424234 SLAIN2Q9P270 581 aa19.27■□□□□ 0.68
ACTN4-203ENST00000424234 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.67
ACTN4-203ENST00000424234 PHF8Q9UPP1 1060 aa19.27■□□□□ 0.67
ACTN4-203ENST00000424234 PMFBP1Q8TBY8 1022 aa19.26■□□□□ 0.67
ACTN4-203ENST00000424234 USP6P35125 1406 aa19.25■□□□□ 0.67
ACTN4-203ENST00000424234 BRINP3Q76B58 766 aa19.25■□□□□ 0.67
ACTN4-203ENST00000424234 PXDNQ92626 1479 aa19.25■□□□□ 0.67
ACTN4-203ENST00000424234 ACEP12821 1306 aa19.25■□□□□ 0.67
ACTN4-203ENST00000424234 CRYBG1Q9Y4K1 1723 aa19.24■□□□□ 0.67
ACTN4-203ENST00000424234 COL16A1Q07092 1604 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-203ENST00000424234 ABCA3Q99758 1704 aa19.23■□□□□ 0.67
ACTN4-203ENST00000424234 NSD3Q9BZ95 1437 aa19.23■□□□□ 0.67
ACTN4-203ENST00000424234 TOM1O60784 492 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms