RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PLEKHH1Q9ULM0 1364 aa18.74■□□□□ 0.59
MSH5-206ENST00000423982 DDRGK1Q96HY6 314 aa18.73■□□□□ 0.59
MSH5-206ENST00000423982 A2ML1A8K2U0 1454 aa18.73■□□□□ 0.59
MSH5-206ENST00000423982 NEXMIFQ5QGS0 1516 aa18.73■□□□□ 0.59
MSH5-206ENST00000423982 RGS3P49796 1198 aa18.72■□□□□ 0.59
MSH5-206ENST00000423982 STK26Q9P289 416 aa18.72■□□□□ 0.59
MSH5-206ENST00000423982 TRAK1Q9UPV9 953 aa18.72■□□□□ 0.59
MSH5-206ENST00000423982 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
MSH5-206ENST00000423982 GSE1Q14687 1217 aa18.72■□□□□ 0.59
MSH5-206ENST00000423982 MYOM2P54296 1465 aa18.71■□□□□ 0.59
MSH5-206ENST00000423982 PPLO60437 1756 aa18.71■□□□□ 0.59
MSH5-206ENST00000423982 DUSP27Q5VZP5 1158 aa18.71■□□□□ 0.59
MSH5-206ENST00000423982 FRAT1Q92837 279 aaPredicted RBP18.71■□□□□ 0.59
MSH5-206ENST00000423982 IFT172Q9UG01 1749 aa18.71■□□□□ 0.59
MSH5-206ENST00000423982 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
MSH5-206ENST00000423982 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
MSH5-206ENST00000423982 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
MSH5-206ENST00000423982 SAFB2Q14151 953 aaKnown RBP eCLIP18.69■□□□□ 0.58
MSH5-206ENST00000423982 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
MSH5-206ENST00000423982 GPRASP1Q5JY77 1395 aa18.68■□□□□ 0.58
MSH5-206ENST00000423982 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
MSH5-206ENST00000423982 TMF1P82094 1093 aa18.67■□□□□ 0.58
MSH5-206ENST00000423982 CENPQQ7L2Z9 268 aaPredicted RBP18.67■□□□□ 0.58
MSH5-206ENST00000423982 DAXXQ9UER7 740 aaPredicted RBP18.67■□□□□ 0.58
MSH5-206ENST00000423982 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
MSH5-206ENST00000423982 C14orf93Q9H972 538 aaKnown RBP18.66■□□□□ 0.58
MSH5-206ENST00000423982 PPP2R1AP30153 589 aa18.66■□□□□ 0.58
MSH5-206ENST00000423982 LTKP29376 864 aa18.65■□□□□ 0.58
MSH5-206ENST00000423982 FAM161AQ3B820 660 aa18.65■□□□□ 0.58
MSH5-206ENST00000423982 FRAT2O75474 233 aaPredicted RBP18.65■□□□□ 0.58
MSH5-206ENST00000423982 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
MSH5-206ENST00000423982 ADAMTSL3P82987 1691 aa18.65■□□□□ 0.58
MSH5-206ENST00000423982 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
MSH5-206ENST00000423982 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
MSH5-206ENST00000423982 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
MSH5-206ENST00000423982 TMEM2Q9UHN6 1383 aa18.63■□□□□ 0.57
MSH5-206ENST00000423982 GOLGA2Q08379 1002 aa18.62■□□□□ 0.57
MSH5-206ENST00000423982 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
MSH5-206ENST00000423982 UBR1Q8IWV7 1749 aa18.61■□□□□ 0.57
MSH5-206ENST00000423982 ZNF521Q96K83 1311 aa18.61■□□□□ 0.57
MSH5-206ENST00000423982 SCAF11Q99590 1463 aaKnown RBP18.61■□□□□ 0.57
MSH5-206ENST00000423982 NLRP1Q9C000 1473 aa18.61■□□□□ 0.57
MSH5-206ENST00000423982 KNSTRNQ9Y448 316 aa18.61■□□□□ 0.57
MSH5-206ENST00000423982 BCAR3O75815 825 aa18.61■□□□□ 0.57
MSH5-206ENST00000423982 PTPRMP28827 1452 aa18.6■□□□□ 0.57
MSH5-206ENST00000423982 ZFYVE9O95405 1425 aa18.6■□□□□ 0.57
MSH5-206ENST00000423982 INSRP06213 1382 aa18.6■□□□□ 0.57
MSH5-206ENST00000423982 AMER1Q5JTC6 1135 aaPredicted RBP18.59■□□□□ 0.57
MSH5-206ENST00000423982 MYO3AQ8NEV4 1616 aa18.59■□□□□ 0.57
MSH5-206ENST00000423982 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.57
MSH5-206ENST00000423982 EID1Q9Y6B2 187 aa18.58■□□□□ 0.57
MSH5-206ENST00000423982 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.58■□□□□ 0.56
MSH5-206ENST00000423982 SLFN5Q08AF3 891 aa18.58■□□□□ 0.56
MSH5-206ENST00000423982 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
MSH5-206ENST00000423982 KDM4FA0A1W2PPD8 638 aa18.56■□□□□ 0.56
MSH5-206ENST00000423982 APAF1O14727 1248 aa18.56■□□□□ 0.56
MSH5-206ENST00000423982 IGHDP01880 384 aa18.56■□□□□ 0.56
MSH5-206ENST00000423982 ADGRB1O14514 1584 aa18.56■□□□□ 0.56
MSH5-206ENST00000423982 LAMC1P11047 1609 aa18.56■□□□□ 0.56
MSH5-206ENST00000423982 HDGFP51858 240 aaKnown RBP18.56■□□□□ 0.56
MSH5-206ENST00000423982 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
MSH5-206ENST00000423982 IQGAP1P46940 1657 aa18.55■□□□□ 0.56
MSH5-206ENST00000423982 ALKQ9UM73 1620 aa18.55■□□□□ 0.56
MSH5-206ENST00000423982 CENPJQ9HC77 1338 aaPredicted RBP18.55■□□□□ 0.56
MSH5-206ENST00000423982 METP08581 1390 aa18.54■□□□□ 0.56
MSH5-206ENST00000423982 SEC24BO95487 1268 aa18.54■□□□□ 0.56
MSH5-206ENST00000423982 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
MSH5-206ENST00000423982 CEP170BQ9Y4F5 1589 aaPredicted RBP18.54■□□□□ 0.56
MSH5-206ENST00000423982 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
MSH5-206ENST00000423982 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.53■□□□□ 0.56
MSH5-206ENST00000423982 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
MSH5-206ENST00000423982 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
MSH5-206ENST00000423982 POGKQ9P215 609 aa18.52■□□□□ 0.56
MSH5-206ENST00000423982 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.55
MSH5-206ENST00000423982 HSPA2P54652 639 aa18.51■□□□□ 0.55
MSH5-206ENST00000423982 USP19O94966 1318 aa18.51■□□□□ 0.55
MSH5-206ENST00000423982 YTHDC2Q9H6S0 1430 aaKnown RBP18.51■□□□□ 0.55
MSH5-206ENST00000423982 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
MSH5-206ENST00000423982 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
MSH5-206ENST00000423982 PANK1Q8TE04 598 aa18.48■□□□□ 0.55
MSH5-206ENST00000423982 NRXN3Q9Y4C0 1643 aa18.48■□□□□ 0.55
MSH5-206ENST00000423982 ANKLE2Q86XL3 938 aa18.47■□□□□ 0.55
MSH5-206ENST00000423982 SLKQ9H2G2 1235 aaPredicted RBP18.47■□□□□ 0.55
MSH5-206ENST00000423982 COG6Q9Y2V7 657 aa18.47■□□□□ 0.55
MSH5-206ENST00000423982 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.55
MSH5-206ENST00000423982 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
MSH5-206ENST00000423982 ADAMTS13Q76LX8 1427 aa18.46■□□□□ 0.55
MSH5-206ENST00000423982 PLEKHG1Q9ULL1 1385 aa18.46■□□□□ 0.55
MSH5-206ENST00000423982 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.54
MSH5-206ENST00000423982 EIF5BO60841 1220 aaKnown RBP18.45■□□□□ 0.54
MSH5-206ENST00000423982 RBM33Q96EV2 1170 aaKnown RBP18.45■□□□□ 0.54
MSH5-206ENST00000423982 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
MSH5-206ENST00000423982 SLIT1O75093 1534 aa18.44■□□□□ 0.54
MSH5-206ENST00000423982 ARHGAP23Q9P227 1491 aa18.44■□□□□ 0.54
MSH5-206ENST00000423982 KDM5AP29375 1690 aaKnown RBP18.44■□□□□ 0.54
MSH5-206ENST00000423982 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
MSH5-206ENST00000423982 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
MSH5-206ENST00000423982 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
MSH5-206ENST00000423982 QRICH2Q9H0J4 1663 aa18.42■□□□□ 0.54
MSH5-206ENST00000423982 ARHGEF28Q8N1W1 1705 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms