RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 C19orf44Q9H6X5 657 aa24.15■■□□□ 1.46
FOXN4-203ENST00000423960 RALGAPBQ86X10 1494 aa24.14■■□□□ 1.46
FOXN4-203ENST00000423960 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.45
FOXN4-203ENST00000423960 MED1Q15648 1581 aaPredicted RBP24.13■■□□□ 1.45
FOXN4-203ENST00000423960 ATF3P18847 181 aa24.13■■□□□ 1.45
FOXN4-203ENST00000423960 ROBO1Q9Y6N7 1651 aa24.13■■□□□ 1.45
FOXN4-203ENST00000423960 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
FOXN4-203ENST00000423960 CADPS2Q86UW7 1296 aa24.11■■□□□ 1.45
FOXN4-203ENST00000423960 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
FOXN4-203ENST00000423960 KNDC1Q76NI1 1749 aa24.1■■□□□ 1.45
FOXN4-203ENST00000423960 SAFB2Q14151 953 aaKnown RBP eCLIP24.1■■□□□ 1.45
FOXN4-203ENST00000423960 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
FOXN4-203ENST00000423960 ADGRL3Q9HAR2 1447 aa24.05■■□□□ 1.44
FOXN4-203ENST00000423960 PHF23Q9BUL5 403 aaPredicted RBP24.05■■□□□ 1.44
FOXN4-203ENST00000423960 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
FOXN4-203ENST00000423960 EIF3AQ14152 1382 aaKnown RBP24.03■■□□□ 1.44
FOXN4-203ENST00000423960 MINK1Q8N4C8 1332 aaPredicted RBP24.02■■□□□ 1.44
FOXN4-203ENST00000423960 DCCP43146 1447 aa24.01■■□□□ 1.43
FOXN4-203ENST00000423960 HIRIP3Q9BW71 556 aaPredicted RBP24■■□□□ 1.43
FOXN4-203ENST00000423960 ARHGEF28Q8N1W1 1705 aaKnown RBP23.99■■□□□ 1.43
FOXN4-203ENST00000423960 BRINP3Q76B58 766 aa23.99■■□□□ 1.43
FOXN4-203ENST00000423960 ZEB1P37275 1124 aaPredicted RBP23.98■■□□□ 1.43
FOXN4-203ENST00000423960 PHLPP1O60346 1717 aa23.97■■□□□ 1.43
FOXN4-203ENST00000423960 MST1RQ04912 1400 aa23.97■■□□□ 1.43
FOXN4-203ENST00000423960 USP47Q96K76 1375 aa23.96■■□□□ 1.43
FOXN4-203ENST00000423960 ST20-MTHFSA0A0A6YYL1 179 aa23.96■■□□□ 1.43
FOXN4-203ENST00000423960 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
FOXN4-203ENST00000423960 WASLO00401 505 aaPredicted RBP23.95■■□□□ 1.42
FOXN4-203ENST00000423960 SOCS7O14512 581 aa23.95■■□□□ 1.42
FOXN4-203ENST00000423960 JCADQ9P266 1359 aa23.93■■□□□ 1.42
FOXN4-203ENST00000423960 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
FOXN4-203ENST00000423960 EIF4G2P78344 907 aaKnown RBP eCLIP23.92■■□□□ 1.42
FOXN4-203ENST00000423960 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
FOXN4-203ENST00000423960 CDK19Q9BWU1 502 aa23.91■■□□□ 1.42
FOXN4-203ENST00000423960 CDC42BPGQ6DT37 1551 aa23.91■■□□□ 1.42
FOXN4-203ENST00000423960 AHDC1Q5TGY3 1603 aaPredicted RBP23.9■■□□□ 1.42
FOXN4-203ENST00000423960 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
FOXN4-203ENST00000423960 DDX17Q92841 729 aaKnown RBP23.89■■□□□ 1.41
FOXN4-203ENST00000423960 RGS17Q9UGC6 210 aaPredicted RBP23.89■■□□□ 1.41
FOXN4-203ENST00000423960 EVC2Q86UK5 1308 aa23.88■■□□□ 1.41
FOXN4-203ENST00000423960 ADGRB2O60241 1585 aa23.88■■□□□ 1.41
FOXN4-203ENST00000423960 TESK2Q96S53 571 aa23.88■■□□□ 1.41
FOXN4-203ENST00000423960 SBNO2Q9Y2G9 1366 aa23.88■■□□□ 1.41
FOXN4-203ENST00000423960 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
FOXN4-203ENST00000423960 C1orf167Q5SNV9 1468 aa23.87■■□□□ 1.41
FOXN4-203ENST00000423960 QRICH2Q9H0J4 1663 aa23.86■■□□□ 1.41
FOXN4-203ENST00000423960 SRPK2P78362 688 aaKnown RBP23.86■■□□□ 1.41
FOXN4-203ENST00000423960 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
FOXN4-203ENST00000423960 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
FOXN4-203ENST00000423960 NUDT16Q96DE0 195 aaKnown RBP23.84■■□□□ 1.41
FOXN4-203ENST00000423960 CABP2Q9NPB3 220 aa23.84■■□□□ 1.41
FOXN4-203ENST00000423960 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
FOXN4-203ENST00000423960 SPATA31A6Q5VVP1 1343 aa23.82■■□□□ 1.4
FOXN4-203ENST00000423960 PRR36Q9H6K5 1346 aa23.82■■□□□ 1.4
FOXN4-203ENST00000423960 TMF1P82094 1093 aa23.81■■□□□ 1.4
FOXN4-203ENST00000423960 FMN2Q9NZ56 1722 aa23.81■■□□□ 1.4
FOXN4-203ENST00000423960 TULP4Q9NRJ4 1543 aa23.79■■□□□ 1.4
FOXN4-203ENST00000423960 NUTM2BA6NNL0 878 aaPredicted RBP23.79■■□□□ 1.4
FOXN4-203ENST00000423960 NUTM2EB1AL46 878 aaPredicted RBP23.79■■□□□ 1.4
FOXN4-203ENST00000423960 NUTM2AQ8IVF1 878 aaPredicted RBP23.79■■□□□ 1.4
FOXN4-203ENST00000423960 CCDC61Q9Y6R9 512 aa23.79■■□□□ 1.4
FOXN4-203ENST00000423960 LRP6O75581 1613 aa23.79■■□□□ 1.4
FOXN4-203ENST00000423960 MEX3CQ5U5Q3 659 aaKnown RBP23.78■■□□□ 1.4
FOXN4-203ENST00000423960 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
FOXN4-203ENST00000423960 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
FOXN4-203ENST00000423960 PUS7Q96PZ0 661 aaKnown RBP23.78■■□□□ 1.4
FOXN4-203ENST00000423960 PHF8Q9UPP1 1060 aa23.78■■□□□ 1.4
FOXN4-203ENST00000423960 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
FOXN4-203ENST00000423960 CDCA8Q53HL2 280 aa23.75■■□□□ 1.39
FOXN4-203ENST00000423960 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
FOXN4-203ENST00000423960 SHPRHQ149N8 1683 aa23.74■■□□□ 1.39
FOXN4-203ENST00000423960 FOXO3O43524 673 aa23.74■■□□□ 1.39
FOXN4-203ENST00000423960 ATP7BP35670 1465 aa23.74■■□□□ 1.39
FOXN4-203ENST00000423960 ATAD2Q6PL18 1390 aa23.73■■□□□ 1.39
FOXN4-203ENST00000423960 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
FOXN4-203ENST00000423960 PLEKHG3A1L390 1219 aa23.72■■□□□ 1.39
FOXN4-203ENST00000423960 CABP1Q9NZU7 370 aa23.72■■□□□ 1.39
FOXN4-203ENST00000423960 PNPLA6Q8IY17 1366 aa23.71■■□□□ 1.39
FOXN4-203ENST00000423960 SOS2Q07890 1332 aaPredicted RBP23.71■■□□□ 1.39
FOXN4-203ENST00000423960 NGDNQ8NEJ9 315 aaKnown RBP23.71■■□□□ 1.39
FOXN4-203ENST00000423960 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
FOXN4-203ENST00000423960 XPCQ01831 940 aaPredicted RBP23.69■■□□□ 1.38
FOXN4-203ENST00000423960 PSME1Q06323 249 aa23.69■■□□□ 1.38
FOXN4-203ENST00000423960 RGPD8O14715 1765 aaPredicted RBP23.69■■□□□ 1.38
FOXN4-203ENST00000423960 PPIP5K1Q6PFW1 1433 aa23.68■■□□□ 1.38
FOXN4-203ENST00000423960 TMC1Q8TDI8 760 aa23.68■■□□□ 1.38
FOXN4-203ENST00000423960 ACEP12821 1306 aa23.67■■□□□ 1.38
FOXN4-203ENST00000423960 KRT28Q7Z3Y7 464 aa23.67■■□□□ 1.38
FOXN4-203ENST00000423960 C11orf95C9JLR9 678 aaPredicted RBP23.65■■□□□ 1.38
FOXN4-203ENST00000423960 SLC12A5Q9H2X9 1139 aa23.65■■□□□ 1.38
FOXN4-203ENST00000423960 KIF1AQ12756 1690 aa23.64■■□□□ 1.38
FOXN4-203ENST00000423960 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.37
FOXN4-203ENST00000423960 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
FOXN4-203ENST00000423960 POLR3AO14802 1390 aaPredicted RBP23.63■■□□□ 1.37
FOXN4-203ENST00000423960 ITSN1Q15811 1721 aa23.62■■□□□ 1.37
FOXN4-203ENST00000423960 ADAMTS2O95450 1211 aa23.62■■□□□ 1.37
FOXN4-203ENST00000423960 C8orf37Q96NL8 207 aa23.62■■□□□ 1.37
FOXN4-203ENST00000423960 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
FOXN4-203ENST00000423960 TOPAZ1Q8N9V7 1692 aa23.61■■□□□ 1.37
FOXN4-203ENST00000423960 PXDNQ92626 1479 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms