RNA–Protein interactions for RNA: ENST00000423894.5

CMC1-204, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2 BASIC

Gene CMC1, Length 549 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-204ENST00000423894 YTHDC2Q9H6S0 1430 aaKnown RBP21.13■□□□□ 0.97
CMC1-204ENST00000423894 LRP6O75581 1613 aa21.13■□□□□ 0.97
CMC1-204ENST00000423894 IFT172Q9UG01 1749 aa21.12■□□□□ 0.97
CMC1-204ENST00000423894 DHX57Q6P158 1386 aaKnown RBP21.12■□□□□ 0.97
CMC1-204ENST00000423894 SAFB2Q14151 953 aaKnown RBP eCLIP21.12■□□□□ 0.97
CMC1-204ENST00000423894 TECPR2O15040 1411 aa21.12■□□□□ 0.97
CMC1-204ENST00000423894 ESCO1Q5FWF5 840 aa21.1■□□□□ 0.97
CMC1-204ENST00000423894 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
CMC1-204ENST00000423894 MYOM2P54296 1465 aa21.09■□□□□ 0.97
CMC1-204ENST00000423894 XPCQ01831 940 aaPredicted RBP21.09■□□□□ 0.97
CMC1-204ENST00000423894 LRRC59Q96AG4 307 aaKnown RBP21.09■□□□□ 0.97
CMC1-204ENST00000423894 PRAM1Q96QH2 718 aa21.09■□□□□ 0.97
CMC1-204ENST00000423894 MEX3CQ5U5Q3 659 aaKnown RBP21.08■□□□□ 0.97
CMC1-204ENST00000423894 SIRT1Q96EB6 747 aa21.08■□□□□ 0.97
CMC1-204ENST00000423894 TRAK1Q9UPV9 953 aa21.07■□□□□ 0.96
CMC1-204ENST00000423894 SOS2Q07890 1332 aaPredicted RBP21.06■□□□□ 0.96
CMC1-204ENST00000423894 FOXO3O43524 673 aa21.06■□□□□ 0.96
CMC1-204ENST00000423894 PNPLA6Q8IY17 1366 aa21.05■□□□□ 0.96
CMC1-204ENST00000423894 POGKQ9P215 609 aa21.02■□□□□ 0.96
CMC1-204ENST00000423894 ADAMTS2O95450 1211 aa21.01■□□□□ 0.95
CMC1-204ENST00000423894 HIRIP3Q9BW71 556 aaPredicted RBP21.01■□□□□ 0.95
CMC1-204ENST00000423894 NHSL1Q5SYE7 1610 aa21■□□□□ 0.95
CMC1-204ENST00000423894 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
CMC1-204ENST00000423894 ADGRB1O14514 1584 aa20.99■□□□□ 0.95
CMC1-204ENST00000423894 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
CMC1-204ENST00000423894 C8orf37Q96NL8 207 aa20.98■□□□□ 0.95
CMC1-204ENST00000423894 MINK1Q8N4C8 1332 aaPredicted RBP20.98■□□□□ 0.95
CMC1-204ENST00000423894 SHPRHQ149N8 1683 aa20.97■□□□□ 0.95
CMC1-204ENST00000423894 NBPF1Q3BBV0 1214 aa20.97■□□□□ 0.95
CMC1-204ENST00000423894 AFF2P51816 1311 aa20.97■□□□□ 0.95
CMC1-204ENST00000423894 NPHP3Q7Z494 1330 aa20.96■□□□□ 0.95
CMC1-204ENST00000423894 STAC3Q96MF2 364 aa20.95■□□□□ 0.94
CMC1-204ENST00000423894 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
CMC1-204ENST00000423894 PHF8Q9UPP1 1060 aa20.94■□□□□ 0.94
CMC1-204ENST00000423894 KNDC1Q76NI1 1749 aa20.94■□□□□ 0.94
CMC1-204ENST00000423894 PXDNQ92626 1479 aa20.94■□□□□ 0.94
CMC1-204ENST00000423894 KRT28Q7Z3Y7 464 aa20.93■□□□□ 0.94
CMC1-204ENST00000423894 PMFBP1Q8TBY8 1022 aa20.93■□□□□ 0.94
CMC1-204ENST00000423894 NEUROD1Q13562 356 aa20.92■□□□□ 0.94
CMC1-204ENST00000423894 L3MBTL2Q969R5 705 aa20.92■□□□□ 0.94
CMC1-204ENST00000423894 PRR36Q9H6K5 1346 aa20.92■□□□□ 0.94
CMC1-204ENST00000423894 PLEKHG5O94827 1062 aa20.91■□□□□ 0.94
CMC1-204ENST00000423894 LAMC1P11047 1609 aa20.91■□□□□ 0.94
CMC1-204ENST00000423894 NGLY1Q96IV0 654 aa20.91■□□□□ 0.94
CMC1-204ENST00000423894 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
CMC1-204ENST00000423894 SPATA31A3Q5VYP0 1347 aa20.88■□□□□ 0.93
CMC1-204ENST00000423894 WASLO00401 505 aaPredicted RBP20.88■□□□□ 0.93
CMC1-204ENST00000423894 QTRT2Q9H974 415 aaKnown RBP20.88■□□□□ 0.93
CMC1-204ENST00000423894 FMN2Q9NZ56 1722 aa20.87■□□□□ 0.93
CMC1-204ENST00000423894 RXRBP28702 533 aa20.87■□□□□ 0.93
CMC1-204ENST00000423894 CABLES1Q8TDN4 633 aa20.87■□□□□ 0.93
CMC1-204ENST00000423894 PSME1Q06323 249 aa20.85■□□□□ 0.93
CMC1-204ENST00000423894 LMOD2Q6P5Q4 547 aa20.83■□□□□ 0.93
CMC1-204ENST00000423894 FNBP4Q8N3X1 1017 aaPredicted RBP20.83■□□□□ 0.93
CMC1-204ENST00000423894 USP21Q9UK80 565 aa20.83■□□□□ 0.93
CMC1-204ENST00000423894 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
CMC1-204ENST00000423894 ANKARQ7Z5J8 1434 aa20.8■□□□□ 0.92
CMC1-204ENST00000423894 RGPD8O14715 1765 aaPredicted RBP20.8■□□□□ 0.92
CMC1-204ENST00000423894 USP32Q8NFA0 1604 aa20.8■□□□□ 0.92
CMC1-204ENST00000423894 NUDT16Q96DE0 195 aaKnown RBP20.8■□□□□ 0.92
CMC1-204ENST00000423894 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
CMC1-204ENST00000423894 TRIM26Q12899 539 aaPredicted RBP20.78■□□□□ 0.92
CMC1-204ENST00000423894 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
CMC1-204ENST00000423894 ADGRB2O60241 1585 aa20.76■□□□□ 0.91
CMC1-204ENST00000423894 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
CMC1-204ENST00000423894 COL22A1Q8NFW1 1626 aaPredicted RBP20.76■□□□□ 0.91
CMC1-204ENST00000423894 NGDNQ8NEJ9 315 aaKnown RBP20.76■□□□□ 0.91
CMC1-204ENST00000423894 TNS3Q68CZ2 1445 aa20.76■□□□□ 0.91
CMC1-204ENST00000423894 BCL9LQ86UU0 1499 aa20.75■□□□□ 0.91
CMC1-204ENST00000423894 TRPC5Q9UL62 973 aaPredicted RBP20.74■□□□□ 0.91
CMC1-204ENST00000423894 TULP4Q9NRJ4 1543 aa20.73■□□□□ 0.91
CMC1-204ENST00000423894 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.91
CMC1-204ENST00000423894 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
CMC1-204ENST00000423894 KIF1AQ12756 1690 aa20.73■□□□□ 0.91
CMC1-204ENST00000423894 RGS12O14924 1447 aa20.72■□□□□ 0.91
CMC1-204ENST00000423894 FAM83GA6ND36 823 aa20.72■□□□□ 0.91
CMC1-204ENST00000423894 PAK3O75914 559 aaPredicted RBP20.72■□□□□ 0.91
CMC1-204ENST00000423894 ARHGEF28Q8N1W1 1705 aaKnown RBP20.72■□□□□ 0.91
CMC1-204ENST00000423894 CENPJQ9HC77 1338 aaPredicted RBP20.72■□□□□ 0.91
CMC1-204ENST00000423894 ATRNO75882 1429 aa20.71■□□□□ 0.91
CMC1-204ENST00000423894 HAP1P54257 671 aaPredicted RBP20.71■□□□□ 0.91
CMC1-204ENST00000423894 EIF3AQ14152 1382 aaKnown RBP20.71■□□□□ 0.91
CMC1-204ENST00000423894 GPRASP1Q5JY77 1395 aa20.71■□□□□ 0.91
CMC1-204ENST00000423894 ATP7BP35670 1465 aa20.7■□□□□ 0.9
CMC1-204ENST00000423894 CCDC61Q9Y6R9 512 aa20.7■□□□□ 0.9
CMC1-204ENST00000423894 NUTM2GQ5VZR2 741 aa20.69■□□□□ 0.9
CMC1-204ENST00000423894 UNC5CLQ8IV45 518 aa20.69■□□□□ 0.9
CMC1-204ENST00000423894 ACEP12821 1306 aa20.69■□□□□ 0.9
CMC1-204ENST00000423894 SRPK2P78362 688 aaKnown RBP20.68■□□□□ 0.9
CMC1-204ENST00000423894 ARHGEF10O15013 1369 aa20.68■□□□□ 0.9
CMC1-204ENST00000423894 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
CMC1-204ENST00000423894 GJD4Q96KN9 370 aaPredicted RBP20.67■□□□□ 0.9
CMC1-204ENST00000423894 CDK12Q9NYV4 1490 aaPredicted RBP20.67■□□□□ 0.9
CMC1-204ENST00000423894 KIAA1210Q9ULL0 1709 aa20.67■□□□□ 0.9
CMC1-204ENST00000423894 SLIT2O94813 1529 aa20.65■□□□□ 0.9
CMC1-204ENST00000423894 ROCK2O75116 1388 aaKnown RBP20.65■□□□□ 0.9
CMC1-204ENST00000423894 CABP1Q9NZU7 370 aa20.63■□□□□ 0.89
CMC1-204ENST00000423894 POLR3AO14802 1390 aaPredicted RBP20.62■□□□□ 0.89
CMC1-204ENST00000423894 TRPM3Q9HCF6 1732 aaPredicted RBP20.61■□□□□ 0.89
CMC1-204ENST00000423894 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms