RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CCDC39Q9UFE4 941 aa8.41□□□□□ -1.06
CNOT4-205ENST00000423368 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.41□□□□□ -1.06
CNOT4-205ENST00000423368 POLR3GO15318 223 aaPredicted RBP8.4□□□□□ -1.06
CNOT4-205ENST00000423368 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.06
CNOT4-205ENST00000423368 PDE6BP35913 854 aa8.4□□□□□ -1.06
CNOT4-205ENST00000423368 CHAF1AQ13111 956 aaPredicted RBP8.4□□□□□ -1.06
CNOT4-205ENST00000423368 EGFL6Q8IUX8 553 aa8.4□□□□□ -1.06
CNOT4-205ENST00000423368 BCAR3O75815 825 aa8.4□□□□□ -1.07
CNOT4-205ENST00000423368 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.07
CNOT4-205ENST00000423368 MYCBPQ99417 103 aaPredicted RBP8.4□□□□□ -1.07
CNOT4-205ENST00000423368 SMC4Q9NTJ3 1288 aa8.4□□□□□ -1.07
CNOT4-205ENST00000423368 CHIC2Q9UKJ5 165 aa8.4□□□□□ -1.07
CNOT4-205ENST00000423368 IBSPP21815 317 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 TTLL5Q6EMB2 1281 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 SPC24Q8NBT2 197 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 GTF3C6Q969F1 213 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 OGFRQ9NZT2 677 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 ISY1Q9ULR0 285 aaKnown RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 HMGN5P82970 282 aaKnown RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 PANK1Q8TE04 598 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 CLUAP1Q96AJ1 413 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 CALR3Q96L12 384 aaKnown RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 SLC24A3Q9HC58 644 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 RBM42Q9BTD8 480 aaKnown RBP8.39□□□□□ -1.07
CNOT4-205ENST00000423368 STAG3Q9UJ98 1225 aa8.39□□□□□ -1.07
CNOT4-205ENST00000423368 AXDND1Q5T1B0 1012 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-205ENST00000423368 LCMT1Q9UIC8 334 aa8.38□□□□□ -1.07
CNOT4-205ENST00000423368 TDO2P48775 406 aa8.38□□□□□ -1.07
CNOT4-205ENST00000423368 SKOR2Q2VWA4 1001 aaPredicted RBP8.38□□□□□ -1.07
CNOT4-205ENST00000423368 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
CNOT4-205ENST00000423368 USP25Q9UHP3 1055 aa8.38□□□□□ -1.07
CNOT4-205ENST00000423368 CEP83Q9Y592 693 aa8.37□□□□□ -1.07
CNOT4-205ENST00000423368 PLCD4Q9BRC7 762 aa8.37□□□□□ -1.07
CNOT4-205ENST00000423368 U2SURPO15042 1029 aaKnown RBP8.37□□□□□ -1.07
CNOT4-205ENST00000423368 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-205ENST00000423368 PPP2R5AQ15172 486 aa8.37□□□□□ -1.07
CNOT4-205ENST00000423368 SYT10Q6XYQ8 523 aa8.37□□□□□ -1.07
CNOT4-205ENST00000423368 C16orf45Q96MC5 204 aaPredicted RBP8.37□□□□□ -1.07
CNOT4-205ENST00000423368 BCL2L13Q9BXK5 485 aa8.36□□□□□ -1.07
CNOT4-205ENST00000423368 TULP2O00295 520 aa8.36□□□□□ -1.07
CNOT4-205ENST00000423368 SLC20A2Q08357 652 aa8.36□□□□□ -1.07
CNOT4-205ENST00000423368 PRIMPOLQ96LW4 560 aa8.36□□□□□ -1.07
CNOT4-205ENST00000423368 NOL10Q9BSC4 688 aaKnown RBP8.36□□□□□ -1.07
CNOT4-205ENST00000423368 CCDC172P0C7W6 258 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 BIRC2Q13490 618 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 PKP1Q13835 747 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 WDR43Q15061 677 aaKnown RBP eCLIP8.35□□□□□ -1.07
CNOT4-205ENST00000423368 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 CD2BP2O95400 341 aaKnown RBP8.35□□□□□ -1.07
CNOT4-205ENST00000423368 POLA2Q14181 598 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 ICE2Q659A1 982 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 NCAPGQ9BPX3 1015 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 SH3BP1Q9Y3L3 701 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 CEP164Q9UPV0 1460 aa8.35□□□□□ -1.07
CNOT4-205ENST00000423368 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
CNOT4-205ENST00000423368 NSFL1CQ9UNZ2 370 aaKnown RBP8.35□□□□□ -1.07
CNOT4-205ENST00000423368 NCBP1Q09161 790 aaKnown RBP8.34□□□□□ -1.07
CNOT4-205ENST00000423368 KRBA2Q6ZNG9 492 aa8.34□□□□□ -1.07
CNOT4-205ENST00000423368 CTNNA3Q9UI47 895 aa8.34□□□□□ -1.07
CNOT4-205ENST00000423368 BAG4O95429 457 aaKnown RBP8.34□□□□□ -1.07
CNOT4-205ENST00000423368 NBPF8Q3BBV2 869 aa8.34□□□□□ -1.07
CNOT4-205ENST00000423368 KRT222Q8N1A0 295 aa8.34□□□□□ -1.07
CNOT4-205ENST00000423368 NOP2P46087 812 aaKnown RBP8.34□□□□□ -1.08
CNOT4-205ENST00000423368 SGSM3Q96HU1 749 aa8.34□□□□□ -1.08
CNOT4-205ENST00000423368 FEZ1Q99689 392 aa8.34□□□□□ -1.08
CNOT4-205ENST00000423368 CT47B1P0C2W7 299 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-205ENST00000423368 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
CNOT4-205ENST00000423368 KLHL40Q2TBA0 621 aa8.33□□□□□ -1.08
CNOT4-205ENST00000423368 CCDC191Q8NCU4 936 aa8.33□□□□□ -1.08
CNOT4-205ENST00000423368 ZNF692Q9BU19 519 aaPredicted RBP8.33□□□□□ -1.08
CNOT4-205ENST00000423368 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
CNOT4-205ENST00000423368 SUFUQ9UMX1 484 aa8.33□□□□□ -1.08
CNOT4-205ENST00000423368 GOLGA6L6A8MZA4 724 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 MYO1CO00159 1063 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 HS1BP3Q53T59 392 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 PDLIM2Q96JY6 352 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 JRKLQ9Y4A0 524 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 GRIPAP1Q4V328 841 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 CCDC146Q8IYE0 955 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 SRRTQ9BXP5 876 aaKnown RBP8.32□□□□□ -1.08
CNOT4-205ENST00000423368 GDPD2Q9HCC8 539 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 PYCARDQ9ULZ3 195 aa8.32□□□□□ -1.08
CNOT4-205ENST00000423368 RAB3GAP1Q15042 981 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 ZNF513Q8N8E2 541 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-205ENST00000423368 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 PIBF1Q8WXW3 757 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 YY1AP1Q9H869 796 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 DIAPH3Q9NSV4 1193 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 DDX41Q9UJV9 622 aaKnown RBP8.31□□□□□ -1.08
CNOT4-205ENST00000423368 TNNQ9UQP3 1299 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 TTC19Q6DKK2 380 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-205ENST00000423368 TSPYL1Q9H0U9 437 aa8.31□□□□□ -1.08
CNOT4-205ENST00000423368 ZCCHC17Q9NP64 241 aaKnown RBP8.31□□□□□ -1.08
CNOT4-205ENST00000423368 ARMC3Q5W041 872 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms